mRNA_M-pyrifera_M_contig93491.21594.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93491.21594.1
Unique NamemRNA_M-pyrifera_M_contig93491.21594.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A517WCV0_9PLAN (Serine protease HhoB n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WCV0_9PLAN)

HSP 1 Score: 479 bits (1232), Expect = 4.770e-163
Identity = 246/250 (98.40%), Postives = 247/250 (98.80%), Query Frame = 1
Query:    1 RPEAQASESDPGASAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            RPEAQASESDPG SAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVID+NGLIATNLHVIGEARPITVQL DGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDS GRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS
Sbjct:   43 RPEAQASESDPGVSAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDSNGLIATNLHVIGEARPITVQLSDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSLGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 292          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A518A6C3_9PLAN (Putative periplasmic serine endoprotease DegP-like n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A6C3_9PLAN)

HSP 1 Score: 431 bits (1109), Expect = 1.540e-144
Identity = 215/239 (89.96%), Postives = 231/239 (96.65%), Query Frame = 1
Query:   34 GASAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            G +AE+LA RA+ESVVSVSFAGRDGQ+AG+GTGFVI A+GLIATNLHVIGEARPI+VQL DGT YEVQEV+ATDR MDLAVLKI+V +LKPLKLAEP+TLKQGAE+VVLGNPQGLRYSVVKGVNSGTRE+DGKPM+QLAIPIEPGNSGGPVLDSQG VQGIVTLKSAVTRNLGYAVN+SALKGLLEKPNPVPI+RWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS
Sbjct:   53 GLTAEELAERARESVVSVSFAGRDGQQAGLGTGFVIGADGLIATNLHVIGEARPISVQLADGTKYEVQEVFATDRLMDLAVLKISVTDLKPLKLAEPETLKQGAEIVVLGNPQGLRYSVVKGVNSGTREIDGKPMIQLAIPIEPGNSGGPVLDSQGHVQGIVTLKSAVTRNLGYAVNISALKGLLEKPNPVPIERWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 291          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A518ICL7_9PLAN (Putative periplasmic serine endoprotease DegP-like n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518ICL7_9PLAN)

HSP 1 Score: 408 bits (1048), Expect = 2.560e-135
Identity = 203/235 (86.38%), Postives = 220/235 (93.62%), Query Frame = 1
Query:   46 EDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            E+LA +AKESV SVSFAGRDG++AG+GTGFVI A+GLIATNLHVIGEARPITVQL DG  Y+V+EVYATDRQMDLAVL+I   +L PL LAEPDTLKQGA++VVLGNPQGLRYSVVKGVNSGTRE+DGKPM+QLAIPIEPGNSGGPVLDS GRVQGIVTLKSAVTRNLGYAVN+SALK LL+KPNPVPI+RWLTIGTLDE LWKPLFGSRWRQRAGRI VDGFGSGLGSRSLCVS
Sbjct:   62 EELAEKAKESVASVSFAGRDGRQAGLGTGFVISADGLIATNLHVIGEARPITVQLSDGEKYDVKEVYATDRQMDLAVLRINAKDLTPLPLAEPDTLKQGADIVVLGNPQGLRYSVVKGVNSGTREIDGKPMIQLAIPIEPGNSGGPVLDSLGRVQGIVTLKSAVTRNLGYAVNISALKQLLDKPNPVPINRWLTIGTLDERLWKPLFGSRWRQRAGRIMVDGFGSGLGSRSLCVS 296          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A6CFR7_9PLAN (Transglut_core2 domain-containing protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A6CFR7_9PLAN)

HSP 1 Score: 398 bits (1022), Expect = 3.430e-131
Identity = 197/237 (83.12%), Postives = 220/237 (92.83%), Query Frame = 1
Query:   40 SAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            SAE LA +AK SVV+VSFAGRDGQ+AG+GTGFVI A+GLIATNLHVIGEARPI+VQ +DG  Y+V+EV+ATDRQMDLAVLK+  ++L PL LAEPD+LKQGAEV+ LGNPQGLRYSVVKGVNSGTRE+DGKPM+QLAIPIEPGNSGGPVLD+QG VQGIVTLKSAVTRNLGYAVN+SALK LLEKPNPVP++RWLTIGTLDE  WKPLFGSRWRQRAGRI V+GFG+GLGSRSLCVS
Sbjct:   80 SAEALAEQAKSSVVAVSFAGRDGQQAGLGTGFVISADGLIATNLHVIGEARPISVQFMDGKKYDVKEVHATDRQMDLAVLKVDAEDLTPLPLAEPDSLKQGAEVIALGNPQGLRYSVVKGVNSGTREIDGKPMIQLAIPIEPGNSGGPVLDAQGYVQGIVTLKSAVTRNLGYAVNISALKVLLEKPNPVPMNRWLTIGTLDERHWKPLFGSRWRQRAGRIMVEGFGNGLGSRSLCVS 316          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A517VXC6_9PLAN (Putative periplasmic serine endoprotease DegP-like n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VXC6_9PLAN)

HSP 1 Score: 394 bits (1013), Expect = 4.540e-130
Identity = 202/250 (80.80%), Postives = 220/250 (88.00%), Query Frame = 1
Query:    1 RPEAQASESDPGASAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            RP    S S    +AE +A  AKESV +VSFAGRDG++AG+GTGFVI A GLIATNLHVIGEARPI+VQ L+G  Y+V+EVYATDRQMDLAVLKI   +L PL LAEPD+LKQGA VV LGNPQGLRYSVVKGVNSGTRE++GKPM+QLAIPIEPGNSGGPVLDS GRVQGIVTLKSAVTRNLGYAVN+SALK LLEKPNPVPI+RWLTIGTLDE  WKPLFGSRWRQRAGRI VDGFG+GLGSRSLCVS
Sbjct:   47 RPAIGTSTSSQEMTAEQIAEYAKESVAAVSFAGRDGKQAGLGTGFVIAAEGLIATNLHVIGEARPISVQFLNGKQYDVKEVYATDRQMDLAVLKIEAKDLPPLPLAEPDSLKQGAAVVALGNPQGLRYSVVKGVNSGTREIEGKPMIQLAIPIEPGNSGGPVLDSLGRVQGIVTLKSAVTRNLGYAVNISALKVLLEKPNPVPINRWLTIGTLDEQHWKPLFGSRWRQRAGRIMVDGFGTGLGSRSLCVS 296          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A350K5A9_9PLAN (Peptidase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K5A9_9PLAN)

HSP 1 Score: 324 bits (831), Expect = 2.060e-110
Identity = 157/187 (83.96%), Postives = 174/187 (93.05%), Query Frame = 1
Query:  136 VIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGR 696
            +I A+GLIATNLHVIGEARPI+VQ +DG  Y+V+EVYATDRQMDLAVLK+  ++L PL LAEPD+LKQGAEV+ LGNPQGLRYSVVKGVNSGTRE+DGKPM+QLAIPIEPGNSGGPVLD+QG VQGIVTLKSAVTRNLGYAVN+SALK LLEKPNPVP++RWLTIGTLDE  WKPLFGSRWRQRAGR
Sbjct:    1 MISADGLIATNLHVIGEARPISVQFMDGKKYDVKEVYATDRQMDLAVLKVDAEDLTPLPLAEPDSLKQGAEVIALGNPQGLRYSVVKGVNSGTREIDGKPMIQLAIPIEPGNSGGPVLDAQGYVQGIVTLKSAVTRNLGYAVNISALKVLLEKPNPVPMNRWLTIGTLDERHWKPLFGSRWRQRAGR 187          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A2D6SRW0_9PLAN (Transglut_core2 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SRW0_9PLAN)

HSP 1 Score: 317 bits (811), Expect = 5.370e-100
Identity = 157/235 (66.81%), Postives = 186/235 (79.15%), Query Frame = 1
Query:   46 EDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            E+LA +A +SV  V+F GRDG++ G+G+GFVI  +GLIATNLHVIGEARPI+V+  DG  ++VQ ++AT R MDLA+LKI   NL  L+L + D LKQG  +V LGNP+GL++SVV GV SG RE+DGKPM+QLAIPIE GNSGGPVLD  GRV GIVTLKS VT NLG+AV V+ALK LLEKPNPVPI RWLTIG L    WKP+FG+ WRQRAGRI VDG G G G RSLC+S
Sbjct:   57 EELAEKAGKSVAVVTFTGRDGKQMGLGSGFVISKDGLIATNLHVIGEARPISVKFADGGEFKVQSIHATQRLMDLAILKIDAQNLPALELGDSDALKQGQSIVALGNPRGLQHSVVSGVVSGKREIDGKPMIQLAIPIESGNSGGPVLDMFGRVHGIVTLKSLVTENLGFAVTVNALKPLLEKPNPVPISRWLTIGALRPEDWKPIFGAHWRQRAGRIHVDGRGDGFGGRSLCLS 291          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A2E7CX80_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CX80_9PLAN)

HSP 1 Score: 310 bits (793), Expect = 1.760e-97
Identity = 149/238 (62.61%), Postives = 185/238 (77.73%), Query Frame = 1
Query:   37 ASAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            AS E+L   A+ES+  VSF GRDG+  G+GTGFV+  +GLIATNLHVIGEARP+ V+  +G  ++V E++AT++ MDLA+++I   NLKPLKL     LKQG ++V LGNP+GL+YSVV GV SG RE+DGKPMLQLAIPIE GNSGGPVLD +G V G+VTLKS +T NLG+AV ++ALK LLEKPN +P+ RWLT+G LD   W   FG+ WRQRAGRI V+G GSG G RSLC+S
Sbjct:   27 ASVEELVKSAQESIAVVSFKGRDGRTLGLGTGFVVSKDGLIATNLHVIGEARPVQVEFANGDKFDVTEIHATEKSMDLAIIRIDAKNLKPLKLGNSTVLKQGEKIVALGNPRGLKYSVVSGVLSGRREIDGKPMLQLAIPIEQGNSGGPVLDMKGNVHGVVTLKSQITNNLGFAVEINALKPLLEKPNRIPMSRWLTVGALDPKEWTTAFGAAWRQRAGRIIVEGKGSGFGGRSLCLS 264          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: UPI0019C9A7F2 (Trypsin-like peptidase domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019C9A7F2)

HSP 1 Score: 303 bits (776), Expect = 3.910e-95
Identity = 144/234 (61.54%), Postives = 184/234 (78.63%), Query Frame = 1
Query:   49 DLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            DL    K S+V ++F+GRDG++ G+GTGFV+ A+GLIATN HVIGE RPI+VQ  DGT  EV EV A+DRQ+DLA++KI    LKPL+L +    K G  VV +GNP+GL++SVV+GV SG RE++G+PMLQLA+PIEPGNSGGP++D  GRV GI+TLKS VT NLG+A++V++LK LLEKPNP+P+ RWLTIG L+   W PLFG+RWR+R  RI V+G G G G RSLC+S
Sbjct:   23 DLVAELKPSIVVITFSGRDGKQEGLGTGFVVSADGLIATNYHVIGEGRPISVQFADGTKREVIEVRASDRQLDLAIVKIDQKGLKPLELGDATKAKDGQSVVAVGNPRGLKHSVVEGVISGQREIEGRPMLQLAMPIEPGNSGGPLVDRDGRVLGIITLKSLVTNNLGFAISVNSLKPLLEKPNPIPMSRWLTIGQLNPRDWTPLFGARWRRRESRIAVEGLGQGFGGRSLCLS 256          
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Match: A0A3B8PTI5_9PLAN (Transglut_core2 domain-containing protein n=4 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8PTI5_9PLAN)

HSP 1 Score: 303 bits (776), Expect = 7.050e-95
Identity = 148/244 (60.66%), Postives = 190/244 (77.87%), Query Frame = 1
Query:   19 SESDPGASAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDANGLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNLKPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLAIPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPNPVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS 750
            S++D   S E+LA +A +S+V V FAGRDG++ G+G+GFVIDA+GL+ATNLHVIGEARPITV   DG  + V  ++AT+R MDLA+LKI    L PL L +   ++QG  +V LGNP GL+ SVVKG+ SG+RE++GKPM+QLA+PIE GNSGGP LDSQGRV GI+T+K   T NLG+AV ++ALK L++KPNP+PI RWLTIGTLD+  W   +G+RWRQRAGRI V+G GSG G R++C S
Sbjct:   35 SKADKALSPEELAAKALKSIVVVQFAGRDGRDRGLGSGFVIDASGLVATNLHVIGEARPITVTTSDGKKHNVTAIHATERAMDLAILKIDAKGLTPLPLGDSTKIRQGQPIVALGNPLGLKLSVVKGIVSGSREIEGKPMIQLAVPIEEGNSGGPALDSQGRVIGILTMKHRYTDNLGFAVAINALKPLIKKPNPIPIGRWLTIGTLDDADWAIHYGARWRQRAGRIHVEGQGSGFGGRAVCFS 278          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93491.21594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WCV0_9PLAN4.770e-16398.40Serine protease HhoB n=6 Tax=Gimesia TaxID=1649453... [more]
A0A518A6C3_9PLAN1.540e-14489.96Putative periplasmic serine endoprotease DegP-like... [more]
A0A518ICL7_9PLAN2.560e-13586.38Putative periplasmic serine endoprotease DegP-like... [more]
A6CFR7_9PLAN3.430e-13183.12Transglut_core2 domain-containing protein n=9 Tax=... [more]
A0A517VXC6_9PLAN4.540e-13080.80Putative periplasmic serine endoprotease DegP-like... [more]
A0A350K5A9_9PLAN2.060e-11083.96Peptidase (Fragment) n=1 Tax=Planctomycetaceae bac... [more]
A0A2D6SRW0_9PLAN5.370e-10066.81Transglut_core2 domain-containing protein n=1 Tax=... [more]
A0A2E7CX80_9PLAN1.760e-9762.61Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
UPI0019C9A7F23.910e-9561.54Trypsin-like peptidase domain-containing protein n... [more]
A0A3B8PTI5_9PLAN7.050e-9560.66Transglut_core2 domain-containing protein n=4 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93491contigM-pyrifera_M_contig93491:2..751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score396.7
Seed ortholog evalue7.8e-108
Seed eggNOG ortholog344747.PM8797T_30454
Preferred namehhoB
KEGG koko:K04771,ko:K08372
KEGG Pathwayko01503,ko02020,map01503,map02020
KEGG ModuleM00728
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Transglutaminase-like superfamily
EggNOG OGs2IXB0@203682,COG0265@1,COG0265@2,COG2912@1,COG2912@2
EC3.4.21.107
COG Functional cat.O
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03110
Exons1
Model size750
Cds size750
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816847.6732838-CDS-M-pyrifera_M_contig93491:1..7511622816847.6732838-CDS-M-pyrifera_M_contig93491:1..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93491 2..751 -
1692278213.5636075-CDS-M-pyrifera_M_contig93491:1..7511692278213.5636075-CDS-M-pyrifera_M_contig93491:1..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93491 2..751 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93491.21594.1prot_M-pyrifera_M_contig93491.21594.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93491 2..751 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93491.21594.1

>prot_M-pyrifera_M_contig93491.21594.1 ID=prot_M-pyrifera_M_contig93491.21594.1|Name=mRNA_M-pyrifera_M_contig93491.21594.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp
RPEAQASESDPGASAEDLAVRAKESVVSVSFAGRDGQEAGMGTGFVIDAN
GLIATNLHVIGEARPITVQLLDGTSYEVQEVYATDRQMDLAVLKIAVDNL
KPLKLAEPDTLKQGAEVVVLGNPQGLRYSVVKGVNSGTREVDGKPMLQLA
IPIEPGNSGGPVLDSQGRVQGIVTLKSAVTRNLGYAVNVSALKGLLEKPN
PVPIDRWLTIGTLDEHLWKPLFGSRWRQRAGRIQVDGFGSGLGSRSLCVS
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mRNA from alignment at M-pyrifera_M_contig93491:2..751-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93491.21594.1 ID=mRNA_M-pyrifera_M_contig93491.21594.1|Name=mRNA_M-pyrifera_M_contig93491.21594.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig93491:2..751- (Macrocystis pyrifera P11B4 male)
CGTCCGGAAGCACAGGCATCAGAATCAGATCCGGGGGCGTCAGCAGAAGA TCTGGCGGTACGGGCTAAAGAATCGGTCGTGTCAGTTTCCTTCGCGGGAC GTGACGGACAGGAAGCCGGCATGGGAACCGGATTCGTGATTGACGCCAAT GGCTTGATCGCGACCAACCTGCATGTGATCGGAGAGGCGCGGCCGATTAC TGTGCAACTCTTAGATGGGACCAGTTATGAAGTTCAGGAAGTCTACGCCA CCGATCGGCAGATGGATCTGGCGGTCTTGAAAATCGCCGTCGATAATCTC AAACCACTCAAGCTGGCGGAGCCTGATACGCTCAAACAGGGAGCGGAAGT GGTTGTGCTGGGGAATCCCCAGGGACTGCGTTACAGCGTGGTTAAGGGAG TCAACTCGGGTACCCGTGAAGTTGATGGTAAGCCGATGCTTCAGCTGGCG ATTCCCATCGAACCTGGCAACAGTGGCGGTCCGGTACTGGATTCCCAGGG ACGCGTGCAGGGAATTGTGACACTCAAGTCCGCGGTCACCCGCAACCTGG GATATGCTGTGAATGTCAGTGCTTTAAAAGGCCTGCTGGAAAAGCCGAAC CCGGTGCCCATCGATCGCTGGCTGACTATCGGCACTCTGGATGAGCATCT GTGGAAGCCCCTGTTCGGTTCCCGCTGGCGACAGCGTGCCGGACGGATCC AGGTGGATGGCTTCGGCTCCGGTCTGGGTAGCCGTTCGTTGTGTGTCTCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93491:2..751-

>mRNA_M-pyrifera_M_contig93491.21594.1 ID=mRNA_M-pyrifera_M_contig93491.21594.1|Name=mRNA_M-pyrifera_M_contig93491.21594.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig93491:2..751- (Macrocystis pyrifera P11B4 male)
CGTCCGGAAGCACAGGCATCAGAATCAGATCCGGGGGCGTCAGCAGAAGA
TCTGGCGGTACGGGCTAAAGAATCGGTCGTGTCAGTTTCCTTCGCGGGAC
GTGACGGACAGGAAGCCGGCATGGGAACCGGATTCGTGATTGACGCCAAT
GGCTTGATCGCGACCAACCTGCATGTGATCGGAGAGGCGCGGCCGATTAC
TGTGCAACTCTTAGATGGGACCAGTTATGAAGTTCAGGAAGTCTACGCCA
CCGATCGGCAGATGGATCTGGCGGTCTTGAAAATCGCCGTCGATAATCTC
AAACCACTCAAGCTGGCGGAGCCTGATACGCTCAAACAGGGAGCGGAAGT
GGTTGTGCTGGGGAATCCCCAGGGACTGCGTTACAGCGTGGTTAAGGGAG
TCAACTCGGGTACCCGTGAAGTTGATGGTAAGCCGATGCTTCAGCTGGCG
ATTCCCATCGAACCTGGCAACAGTGGCGGTCCGGTACTGGATTCCCAGGG
ACGCGTGCAGGGAATTGTGACACTCAAGTCCGCGGTCACCCGCAACCTGG
GATATGCTGTGAATGTCAGTGCTTTAAAAGGCCTGCTGGAAAAGCCGAAC
CCGGTGCCCATCGATCGCTGGCTGACTATCGGCACTCTGGATGAGCATCT
GTGGAAGCCCCTGTTCGGTTCCCGCTGGCGACAGCGTGCCGGACGGATCC
AGGTGGATGGCTTCGGCTCCGGTCTGGGTAGCCGTTCGTTGTGTGTCTCC
CGTCCGGAAGCACAGGCATCAGAATCAGATCCGGGGGCGTCAGCAGAAGA
TCTGGCGGTACGGGCTAAAGAATCGGTCGTGTCAGTTTCCTTCGCGGGAC
GTGACGGACAGGAAGCCGGCATGGGAACCGGATTCGTGATTGACGCCAAT
GGCTTGATCGCGACCAACCTGCATGTGATCGGAGAGGCGCGGCCGATTAC
TGTGCAACTCTTAGATGGGACCAGTTATGAAGTTCAGGAAGTCTACGCCA
CCGATCGGCAGATGGATCTGGCGGTCTTGAAAATCGCCGTCGATAATCTC
AAACCACTCAAGCTGGCGGAGCCTGATACGCTCAAACAGGGAGCGGAAGT
GGTTGTGCTGGGGAATCCCCAGGGACTGCGTTACAGCGTGGTTAAGGGAG
TCAACTCGGGTACCCGTGAAGTTGATGGTAAGCCGATGCTTCAGCTGGCG
ATTCCCATCGAACCTGGCAACAGTGGCGGTCCGGTACTGGATTCCCAGGG
ACGCGTGCAGGGAATTGTGACACTCAAGTCCGCGGTCACCCGCAACCTGG
GATATGCTGTGAATGTCAGTGCTTTAAAAGGCCTGCTGGAAAAGCCGAAC
CCGGTGCCCATCGATCGCTGGCTGACTATCGGCACTCTGGATGAGCATCT
GTGGAAGCCCCTGTTCGGTTCCCGCTGGCGACAGCGTGCCGGACGGATCC
AGGTGGATGGCTTCGGCTCCGGTCTGGGTAGCCGTTCGTTGTGTGTCTCC
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