mRNA_M-pyrifera_M_contig93487.21590.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93487.21590.1
Unique NamemRNA_M-pyrifera_M_contig93487.21590.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A7J6T4W8_PEROL (N-acetyltransferase domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6T4W8_PEROL)

HSP 1 Score: 73.9 bits (180), Expect = 1.710e-14
Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = 1
Query:   52 LGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPTYHSI 312
            +GE + P A++EYR+     V         L++ HT + PA RGKGLA+ +  AAF++A     +++PTCSY+   FLPKHP++ S+
Sbjct:   16 IGESARPLAYLEYRLPTAGRV---------LDITHTFTAPAGRGKGLAALLAVAAFEYAKSNGYKVIPTCSYISQTFLPKHPSFASL 93          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A7J6P3D8_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6P3D8_PEROL)

HSP 1 Score: 77.4 bits (189), Expect = 2.100e-14
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   52 LGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPTYHSI 312
            +GE++ P A++EYR+           G  VL++ HT + PA RGKGLA+ +  AAF++A     +++PTCSY+   FLPKHP++ S+
Sbjct:   16 IGENARPLAYLEYRL---------PTGRRVLDITHTFTAPAGRGKGLAALLAVAAFEYAKSNGYKVIPTCSYISQTFLPKHPSFASL 93          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A5A8CFH2_CAFRO (N-acetyltransferase domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CFH2_CAFRO)

HSP 1 Score: 75.9 bits (185), Expect = 4.550e-14
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:    4 VVHEKEHHRFSLYDPSLGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPTY 303
            V+H++   +F + D + G    PAAFV Y V  GV  G  +GG   ++L+HT S+PA+RGKGLA  VVE A +      LR +PTCSYV + F+ KHP +
Sbjct:   22 VIHDEAASQFVIRDSAAGT---PAAFVGYSVAAGV-CGGCKGG--TIDLFHTFSDPAFRGKGLAGHVVEQALRFCRDRGLRAVPTCSYV-AHFVKKHPEW 114          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A022Q5U3_ERYGU (N-acetyltransferase domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q5U3_ERYGU)

HSP 1 Score: 71.2 bits (173), Expect = 6.410e-14
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 1
Query:   58 EDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPTYHSI 312
            E  +  A++EY V          GG  V+++ HT   P  RG GLA+ +  AAF HA H SL I+P+CSYV   FLP++PT++SI
Sbjct:   18 ETEDKKAYLEYEV-------RCNGGVNVMDITHTYVPPIKRGLGLAAHLCAAAFSHAQHHSLSIIPSCSYVSDTFLPRNPTWNSI 95          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A7R9UDH8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDH8_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.300e-13
Identity = 47/125 (37.60%), Postives = 63/125 (50.40%), Query Frame = 1
Query:    1 DVVHEKEHHRFSLYDPSLGEDSE-PAAFVEYRVGGGVHVGS------------------GEGGE--GVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPTYHSI 312
            DV HE      +L   SL + SE P AFVEY +  G   GS                   E G   G++++ HT   P YRGKG+A  + +AAF++    SL + P+CSYV S F+PKHP +  I
Sbjct:    6 DVRHESPKFVLTL---SLEDGSEGPEAFVEYEMDSGEDSGSKANAVGGAKALDTVQACRAESGSFLGIMDITHTFVPPEYRGKGVAGVLCQAAFEYCRENSLTVRPSCSYVSSRFVPKHPEFADI 127          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A6M8UZ39_9BACT (N-acetyltransferase n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A6M8UZ39_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 7.770e-13
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1
Query:    4 VVHEKEHHRFSLYDPSLGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYV 270
            V+HEKE+ RF +Y    GE     A+VEYR+               ++LYHT +NPA RGKGLA+ V  AA + A   +L+++PTC Y+
Sbjct:    5 VIHEKENKRFIIYTDG-GE-----AYVEYRLD-----------NNEMDLYHTFTNPALRGKGLAALVARAALEFAKENNLKVIPTCPYI 76          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A1G0S8V3_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteria bacterium RBG_16_36_9 TaxID=1798435 RepID=A0A1G0S8V3_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 2.060e-12
Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 1
Query:    1 DVVHEKEHHRFSLYDPSLGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPTY 303
            +V+HEKE+ RF +Y     E +E   +VEY++               ++L HT ++PA RGKGLA+ VV AA + A   ++R++PTCSYV S F+ K+  Y
Sbjct:    4 EVIHEKENERFVIYV----EGNE--VYVEYKMR-----------NNKIDLNHTFTHPALRGKGLAAHVVRAALEFAKENNMRVIPTCSYVQS-FIAKNDEY 86          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A7J7BTC9_TRIWF (Acetyltransferase n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7BTC9_TRIWF)

HSP 1 Score: 66.2 bits (160), Expect = 5.710e-12
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 1
Query:   58 EDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPTYHSI 312
            E  +  A++EY +           G  V+++ HT    + RG GLAS +  AAF HA H SL ++PTCSYV   FLP++P++H +
Sbjct:   22 ETEDKEAYIEYVL---------RDGGNVMDIVHTYVPSSKRGLGLASLLCVAAFNHAKHHSLSVIPTCSYVSDTFLPRNPSWHPL 97          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A6G0XAQ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAQ5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.910e-12
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 1
Query:    4 VVHEKEHHRFSLYDPSLGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPK 291
            +VHE++H RF +Y P    + +   ++ Y            G   VL+L HTV +PA RG+GLA K+ +AAF  A     +++PTCSY+   +L +
Sbjct:    5 IVHEQDHLRFVVYSP----EKQQLGYLSYEQ-------REHGATTVLDLQHTVVDPAGRGQGLAGKLCDAAFTFAQEQGYKVIPTCSYISDTYLKR 89          
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Match: A0A811QSR6_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811QSR6_9POAL)

HSP 1 Score: 64.7 bits (156), Expect = 4.010e-11
Identity = 32/85 (37.65%), Postives = 51/85 (60.00%), Query Frame = 1
Query:   43 DPSLGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLELYHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHP 297
            D    E  +  AF++YR+  G H         V+++ HT    + RG+GLA+++ +AAF HAS   +R+LPTCSY+   +LP++P
Sbjct:   27 DKGRFETPDGEAFLQYRLLDG-HGSGASPAAAVMDMVHTYVPRSKRGQGLAARLCDAAFAHASARGMRVLPTCSYISDTYLPRNP 110          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93487.21590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J6T4W8_PEROL1.710e-1440.23N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7J6P3D8_PEROL2.100e-1441.38Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]
A0A5A8CFH2_CAFRO4.550e-1445.00N-acetyltransferase domain-containing protein n=2 ... [more]
A0A022Q5U3_ERYGU6.410e-1443.53N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7R9UDH8_9STRA5.300e-1337.60Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A6M8UZ39_9BACT7.770e-1341.57N-acetyltransferase n=3 Tax=Bacteroidetes/Chlorobi... [more]
A0A1G0S8V3_9BACT2.060e-1239.60Uncharacterized protein n=1 Tax=Ignavibacteria bac... [more]
A0A7J7BTC9_TRIWF5.710e-1238.82Acetyltransferase n=1 Tax=Tripterygium wilfordii T... [more]
A0A6G0XAQ5_9STRA8.910e-1235.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A811QSR6_9POAL4.010e-1137.65Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93487contigM-pyrifera_M_contig93487:435..746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score70.5
Seed ortholog evalue5.3e-10
Seed eggNOG ortholog4155.Migut.C01128.1.p
KEGG koko:K06975
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004402,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006325,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0034212,GO:0036211,GO:0042579,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051276,GO:0061733,GO:0071704,GO:0071840,GO:1901564
EggNOG free text desc.GCN5-related N-acetyl-transferase
EggNOG OGs2BMNI@1,2S1MA@2759,37VYH@33090,3GJMR@35493,44KZ4@71274
COG Functional cat.S
Best tax levelasterids
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size312
Cds size312
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816847.5158544-CDS-M-pyrifera_M_contig93487:434..7461622816847.5158544-CDS-M-pyrifera_M_contig93487:434..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93487 435..746 +
1692278213.4844694-CDS-M-pyrifera_M_contig93487:434..7461692278213.4844694-CDS-M-pyrifera_M_contig93487:434..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93487 435..746 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93487.21590.1prot_M-pyrifera_M_contig93487.21590.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93487 435..746 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93487.21590.1

>prot_M-pyrifera_M_contig93487.21590.1 ID=prot_M-pyrifera_M_contig93487.21590.1|Name=mRNA_M-pyrifera_M_contig93487.21590.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
DVVHEKEHHRFSLYDPSLGEDSEPAAFVEYRVGGGVHVGSGEGGEGVLEL
YHTVSNPAYRGKGLASKVVEAAFQHASHTSLRILPTCSYVHSAFLPKHPT
YHSI
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mRNA from alignment at M-pyrifera_M_contig93487:435..746+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93487.21590.1 ID=mRNA_M-pyrifera_M_contig93487.21590.1|Name=mRNA_M-pyrifera_M_contig93487.21590.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig93487:435..746+ (Macrocystis pyrifera P11B4 male)
GATGTGGTGCATGAAAAGGAACATCACCGGTTTTCTCTGTACGACCCGAG CTTGGGAGAGGATTCTGAACCAGCTGCGTTTGTTGAGTATCGTGTGGGTG GAGGGGTACATGTAGGGAGTGGGGAAGGGGGCGAGGGAGTGCTGGAATTA TACCACACAGTTTCCAACCCGGCATATCGTGGCAAAGGCTTAGCAAGTAA GGTAGTGGAGGCTGCATTCCAACATGCTTCTCACACCTCCCTCCGAATCC TCCCTACTTGCTCCTATGTACATTCTGCATTCCTCCCAAAACACCCAACA TATCACTCCATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93487:435..746+

>mRNA_M-pyrifera_M_contig93487.21590.1 ID=mRNA_M-pyrifera_M_contig93487.21590.1|Name=mRNA_M-pyrifera_M_contig93487.21590.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig93487:435..746+ (Macrocystis pyrifera P11B4 male)
GATGTGGTGCATGAAAAGGAACATCACCGGTTTTCTCTGTACGACCCGAG
CTTGGGAGAGGATTCTGAACCAGCTGCGTTTGTTGAGTATCGTGTGGGTG
GAGGGGTACATGTAGGGAGTGGGGAAGGGGGCGAGGGAGTGCTGGAATTA
TACCACACAGTTTCCAACCCGGCATATCGTGGCAAAGGCTTAGCAAGTAA
GGTAGTGGAGGCTGCATTCCAACATGCTTCTCACACCTCCCTCCGAATCC
TCCCTACTTGCTCCTATGTACATTCTGCATTCCTCCCAAAACACCCAACA
TATCACTCCATCGATGTGGTGCATGAAAAGGAACATCACCGGTTTTCTCT
GTACGACCCGAGCTTGGGAGAGGATTCTGAACCAGCTGCGTTTGTTGAGT
ATCGTGTGGGTGGAGGGGTACATGTAGGGAGTGGGGAAGGGGGCGAGGGA
GTGCTGGAATTATACCACACAGTTTCCAACCCGGCATATCGTGGCAAAGG
CTTAGCAAGTAAGGTAGTGGAGGCTGCATTCCAACATGCTTCTCACACCT
CCCTCCGAATCCTCCCTACTTGCTCCTATGTACATTCTGCATTCCTCCCA
AAACACCCAACATATCACTCCATC
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