mRNA_M-pyrifera_M_contig93457.21579.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93457.21579.1
Unique NamemRNA_M-pyrifera_M_contig93457.21579.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A7V9BXZ3_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9BXZ3_9ACTN)

HSP 1 Score: 364 bits (934), Expect = 8.710e-121
Identity = 177/250 (70.80%), Postives = 207/250 (82.80%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKILDTV 750
            DSV+DCY ALGSIHA WKPVQGRFKDY+AMPKFNLYQSLHTTVV P+GKP+EVQIRT EMH RAE+G+A+H+ YKEQT P         DL WL R++DW++ETSDP EFM SLKIDL+Q+EVFVFTPKG V TL TG+T IDFAYAIHT+VGH+ +GA+VNGRLV L   L SG+TVEIFTSK  GA PS+DWL FV TPRA SKI+QWFSRERREDAI  G++++ KALR++GLPVQK+ GS  + TV
Sbjct:  104 DSVKDCYGALGSIHAMWKPVQGRFKDYIAMPKFNLYQSLHTTVVAPEGKPVEVQIRTEEMHRRAEYGIAAHWGYKEQTSPAE-------DLAWLQRMVDWQQETSDPTEFMESLKIDLEQDEVFVFTPKGKVITLPTGATAIDFAYAIHTEVGHRCIGARVNGRLVPLDSALGSGDTVEIFTSKVAGAGPSRDWLQFVHTPRARSKIRQWFSRERREDAIETGKDELIKALRKEGLPVQKMAGSAAIGTV 346
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A5Q2RM43_9ACTN (RelA/SpoT family protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RM43_9ACTN)

HSP 1 Score: 364 bits (935), Expect = 9.680e-119
Identity = 177/250 (70.80%), Postives = 210/250 (84.00%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKILDTV 750
            D+V+DCYAALGSIHATWKPVQGRFKDY+AMPKFNLYQSLHTTVVGPQGKP+EVQIRT EMHNRAE+GVA+H+ YK+        +A   D+ WL RIIDW++ETSDP EFMA+LKIDL+Q+EVFVFTPKG V TL  GSTPIDFAY+IHT+VGH  +GA+VNGRLV L  +L SG+TVEIFTSK EGA PS+DWL    TPRA +KI+QWFSRERREDAI  G++++++ALRR+GLPVQK+  S +L  V
Sbjct:  285 DTVKDCYAALGSIHATWKPVQGRFKDYIAMPKFNLYQSLHTTVVGPQGKPLEVQIRTTEMHNRAEYGVAAHWSYKD--------AASRDDVAWLNRIIDWQQETSDPSEFMANLKIDLEQDEVFVFTPKGKVVTLPVGSTPIDFAYSIHTEVGHACIGARVNGRLVPLDSKLTSGDTVEIFTSKVEGAGPSRDWLKIAVTPRANNKIRQWFSRERREDAIETGRDELERALRREGLPVQKLARSPLLSEV 526
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A7C4TDN0_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7C4TDN0_9ACTN)

HSP 1 Score: 362 bits (929), Expect = 6.230e-118
Identity = 177/247 (71.66%), Postives = 204/247 (82.59%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKIL 741
            DSV+DCY ALGSIHA W+PVQGRFKDY+AMPKFNLYQSLHTTVVGPQGKP+E QIRT+EMH RAE+GVA+H+ YKEQ  P         DL WL R++DW++ETSDP EFM SLKIDL+  EVFVFTPKG V TL TGSTP+DFAYAIHTDVGH+ +G++VNGRLV L   L SG+T EIFTSK EGA PS+DWL FV+TPRA SKI+QWFSRERR DAI  G+ED+ KALRR+GLPVQK+  S +L
Sbjct:  281 DSVKDCYGALGSIHALWRPVQGRFKDYIAMPKFNLYQSLHTTVVGPQGKPVEFQIRTHEMHRRAEYGVAAHWGYKEQRNPTE-------DLVWLQRLVDWQQETSDPAEFMQSLKIDLESGEVFVFTPKGKVVTLPTGSTPVDFAYAIHTDVGHRCIGSRVNGRLVPLDSALQSGDTCEIFTSKVEGAGPSRDWLQFVQTPRARSKIRQWFSRERRVDAIDAGREDLTKALRREGLPVQKLANSPVL 520
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A538BC02_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538BC02_9ACTN)

HSP 1 Score: 357 bits (916), Expect = 6.500e-117
Identity = 172/250 (68.80%), Postives = 205/250 (82.00%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKILDTV 750
            DSV+DCYAALGSIHATWKPVQGRFKDY+AMPKFNLYQSLHTTVVGPQGKP+EVQIRT EMH R+EFGVA+H+ YKE T         + D  WL RI+DW++ETSDP  FM SLKIDL+Q+EVFVFTPKGDV TL   +TPIDFAYAIHT+VGH+ +GA++NGRL +L   L SG+TVE+FTSK  GA PS+DWL  V +PRA +KI+QWFSRERREDAI  G++++ KALRR+GLPVQK+  S ++  V
Sbjct:  293 DSVKDCYAALGSIHATWKPVQGRFKDYIAMPKFNLYQSLHTTVVGPQGKPLEVQIRTREMHRRSEFGVAAHWGYKEHTP--------DTDTAWLQRIVDWQQETSDPRAFMESLKIDLEQDEVFVFTPKGDVVTLPAQATPIDFAYAIHTEVGHRCIGARINGRLTSLDTPLRSGDTVEVFTSKVAGAGPSRDWLKIVVSPRARNKIRQWFSRERREDAIENGRDELTKALRREGLPVQKVAASAVIPKV 534
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BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A7X7D638_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D638_9ACTN)

HSP 1 Score: 358 bits (919), Expect = 2.390e-116
Identity = 173/241 (71.78%), Postives = 205/241 (85.06%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKI 723
            DSVRDCYAALGSIH+TW+PVQGRFKDYVAMPKFNLYQSLHTTV+GPQGKP+EVQ+RT EMH RAEFGVA+HF YK      GS +    +L WL RI+DW++ETSDP +FM +LK+DL+Q+EV+VFTPKG V T+  G+TPIDFAYA+HT+VGH  VGA+VNGRLVALS +LNSG+T EIFTSK EG  PS+DWL  V+TPRAA+KI+QWFSRERREDA   G+ED+QK LRR+GLP QK+
Sbjct:  285 DSVRDCYAALGSIHSTWRPVQGRFKDYVAMPKFNLYQSLHTTVIGPQGKPLEVQLRTREMHQRAEFGVAAHFAYKI-----GSPTD---ELAWLNRIVDWQQETSDPAQFMETLKVDLEQDEVYVFTPKGRVVTMAKGATPIDFAYAVHTEVGHACVGARVNGRLVALSHQLNSGDTCEIFTSKVEGTGPSRDWLQIVKTPRAANKIRQWFSRERREDAKESGREDLQKQLRREGLPTQKL 517
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A538HF87_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538HF87_9ACTN)

HSP 1 Score: 358 bits (918), Expect = 2.900e-116
Identity = 173/247 (70.04%), Postives = 207/247 (83.81%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKIL 741
            +SV+DCYAALGS+HATWKPVQGRFKDY+AMPKFNLYQSLHTTVVGP+GKP+EVQIRT EMH RAEFG+A+H+ YKE++           D+ WL RI+DW++ETSDP EFM SLKIDL+Q+EVFVFTPKGDV T+  G+TPIDFAY+IHT+VGH+ +GA+VNGRLV L   L SG+TVEIFTSK EGA PS+DWL  V TPRA +KI+QWFSRERREDA   G+E++ KALRR+GLPVQK+  S +L
Sbjct:  283 ESVKDCYAALGSLHATWKPVQGRFKDYIAMPKFNLYQSLHTTVVGPEGKPLEVQIRTKEMHQRAEFGIAAHWGYKERSPA--------TDIAWLNRIVDWQQETSDPAEFMKSLKIDLEQDEVFVFTPKGDVVTMPMGATPIDFAYSIHTEVGHRCIGARVNGRLVPLETPLASGDTVEIFTSKVEGAGPSRDWLQLVATPRARNKIRQWFSRERREDARETGREELVKALRREGLPVQKLTTSPVL 521
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A6I3FDC8_9ACTN (RelA/SpoT family protein n=2 Tax=root TaxID=1 RepID=A0A6I3FDC8_9ACTN)

HSP 1 Score: 357 bits (915), Expect = 1.310e-115
Identity = 180/250 (72.00%), Postives = 206/250 (82.40%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKILDTV 750
            D+V+DCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKP+EVQIRT EMH RAEFGVA+H+ YK+     GS +    DL WL RI+DW+ ETSDP EFMA+LKIDLDQ+EVFVFTPKG V TL  G+T IDFAYAIHT+VGH  +GA+VNGRLV L  EL SG++VEIFTSK  G+ PS DWL FV T RA++KI+ W SRERREDAI  G +D+ KALRR+GLPVQK+  SKILD +
Sbjct:  285 DTVKDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPLEVQIRTLEMHRRAEFGVAAHWNYKDD---HGSTA----DLAWLNRIVDWQSETSDPTEFMANLKIDLDQDEVFVFTPKGKVITLPKGATTIDFAYAIHTEVGHACIGARVNGRLVQLDTELQSGDSVEIFTSKVGGSGPSLDWLKFVVTHRASNKIRAWQSRERREDAIENGSDDVIKALRREGLPVQKVQQSKILDEI 527
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A3N5KA68_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KA68_9ACTN)

HSP 1 Score: 352 bits (903), Expect = 2.700e-115
Identity = 169/248 (68.15%), Postives = 203/248 (81.85%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKILD 744
            D+V+DCYAALGSIHATWKPVQGRFKDY+AMPKFNLYQSLHTTVVGP GKP+EVQIRT EMH R+E+GVA+H+ YKE T           D+ WL RI+DW++ETSDP +FM +LK DLDQ+EVFVFTPKG V TL   +TPIDFAY++HT+VGH  +GA+VNGRLV L   L SG+T EIFTSK EGA PS+DWL  V +PRA +KI+QWFSRERREDAI  G+E++ KA+RR+GLPVQK+LG  +L+
Sbjct:  168 DTVKDCYAALGSIHATWKPVQGRFKDYIAMPKFNLYQSLHTTVVGPGGKPLEVQIRTREMHQRSEYGVAAHWSYKENT--------SATDIAWLNRIVDWQQETSDPAQFMENLKTDLDQDEVFVFTPKGRVVTLPRSATPIDFAYSVHTEVGHSCIGARVNGRLVPLDSSLLSGDTCEIFTSKVEGAGPSRDWLKIVVSPRARNKIRQWFSRERREDAIETGREELVKAMRREGLPVQKLLGGDVLE 407
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A538JTX9_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JTX9_9ACTN)

HSP 1 Score: 355 bits (910), Expect = 5.030e-115
Identity = 173/247 (70.04%), Postives = 206/247 (83.40%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKIL 741
            +SV+DCYAALGSIHATW PVQGRFKDY+AMPKFNLYQSLHTTVVGPQGKP+EVQIRT EMH+RAEFG+A+H+ YKE + P         D+ WL RI+DW+ ETSDP EFM +LKIDLDQ+EVFVFTPKGDV TL   S+PIDFAY+IHT+VGH+ +GA+VNGRLV L   L+SG+TVEIFTSK E A PS+DWL  V +PRA +KI+QWFSRERREDAI  G++D+ KA+RR+GLPVQK+  S +L
Sbjct:  284 ESVKDCYAALGSIHATWLPVQGRFKDYIAMPKFNLYQSLHTTVVGPQGKPLEVQIRTREMHHRAEFGIAAHWGYKEHS-PND-------DVAWLQRIVDWQSETSDPAEFMETLKIDLDQDEVFVFTPKGDVITLPVKSSPIDFAYSIHTEVGHRCIGARVNGRLVPLESHLSSGDTVEIFTSKVEHAGPSRDWLKLVASPRARNKIRQWFSRERREDAIENGRDDLHKAMRREGLPVQKLGSSPVL 522
[Close]
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Match: A0A7Y2DPM8_9ACTN (Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DPM8_9ACTN)

HSP 1 Score: 353 bits (906), Expect = 5.820e-115
Identity = 172/250 (68.80%), Postives = 201/250 (80.40%), Query Frame = 1 
Query:    1 DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKPIEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDWEKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHTDVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRTPRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKILDTV 750
            DS+RDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTV+GP GKPIEVQIRT EMH+RAE GVA+HF+YK++          + D PWL RIIDW+ +TSDP  FM +LK+DLD +E+++FTP GDV TL TG+T IDFAYAIHTDVGHKTVGAKV+GRL+ LSE L SG+TVE+ T+K EGA PS+DWL F  TPRA SKIKQWFS+ERR DAIA G E + KAL +  LP +K+    +LD V
Sbjct:  286 DSIRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVIGPLGKPIEVQIRTYEMHDRAERGVAAHFVYKDR-------DDSDSDAPWLQRIIDWDTDTSDPSAFMDNLKVDLDSDEIYIFTPAGDVVTLHTGATAIDFAYAIHTDVGHKTVGAKVDGRLLPLSEVLESGQTVEVLTAKGEGAGPSKDWLAFAATPRAKSKIKQWFSKERRSDAIAHGNEAVTKALNKANLPHRKLTDEGVLDEV 528
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93457.21579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V9BXZ3_9ACTN8.710e-12170.80Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A5Q2RM43_9ACTN9.680e-11970.80RelA/SpoT family protein n=1 Tax=Actinomarinicola ... [more]
A0A7C4TDN0_9ACTN6.230e-11871.66Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A538BC02_9ACTN6.500e-11768.80Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A7X7D638_9ACTN2.390e-11671.78Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A538HF87_9ACTN2.900e-11670.04Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A6I3FDC8_9ACTN1.310e-11572.00RelA/SpoT family protein n=2 Tax=root TaxID=1 RepI... [more]
A0A3N5KA68_9ACTN2.700e-11568.15Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A538JTX9_9ACTN5.030e-11570.04Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]
A0A7Y2DPM8_9ACTN5.820e-11568.80Bifunctional (P)ppGpp synthetase/guanosine-3',5'-b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93457contigM-pyrifera_M_contig93457:2..751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score341.3
Seed ortholog evalue3.9e-91
Seed eggNOG ortholog1095767.CAHD01000202_gene2319
Preferred namerelA
KEGG rclassRC00002,RC00078
KEGG koko:K00951,ko:K01139
KEGG ReactionR00336,R00429
KEGG Pathwayko00230,map00230
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009259,GO:0009260,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0015969,GO:0015970,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042578,GO:0042594,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044419,GO:0044464,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051704,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
EggNOG free text desc.In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EggNOG OGs2GJYQ@201174,4F0M3@85016,COG0317@1,COG0317@2
EC2.7.6.5,3.1.7.2
COG Functional cat.KT
Best tax levelCellulomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Exons1
Model size750
Cds size750
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816847.0343451-CDS-M-pyrifera_M_contig93457:1..7511622816847.0343451-CDS-M-pyrifera_M_contig93457:1..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93457 2..751 +
1692278213.2757876-CDS-M-pyrifera_M_contig93457:1..7511692278213.2757876-CDS-M-pyrifera_M_contig93457:1..751Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93457 2..751 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93457.21579.1prot_M-pyrifera_M_contig93457.21579.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93457 2..751 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93457.21579.1

>prot_M-pyrifera_M_contig93457.21579.1 ID=prot_M-pyrifera_M_contig93457.21579.1|Name=mRNA_M-pyrifera_M_contig93457.21579.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp
DSVRDCYAALGSIHATWKPVQGRFKDYVAMPKFNLYQSLHTTVVGPQGKP
IEVQIRTNEMHNRAEFGVASHFLYKEQTVPRGSASAGELDLPWLARIIDW
EKETSDPDEFMASLKIDLDQEEVFVFTPKGDVFTLVTGSTPIDFAYAIHT
DVGHKTVGAKVNGRLVALSEELNSGETVEIFTSKSEGAAPSQDWLLFVRT
PRAASKIKQWFSRERREDAIAQGQEDIQKALRRDGLPVQKILGSKILDTV
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mRNA from alignment at M-pyrifera_M_contig93457:2..751+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93457.21579.1 ID=mRNA_M-pyrifera_M_contig93457.21579.1|Name=mRNA_M-pyrifera_M_contig93457.21579.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig93457:2..751+ (Macrocystis pyrifera P11B4 male)
GATTCGGTGCGAGACTGCTATGCGGCGCTCGGTTCGATCCACGCAACCTG
GAAACCGGTCCAAGGCCGGTTCAAGGACTACGTGGCGATGCCCAAGTTCA
ACCTCTACCAGTCGTTGCACACCACCGTCGTCGGACCCCAGGGCAAACCG
ATCGAGGTGCAGATCCGAACCAACGAGATGCACAACCGTGCCGAGTTCGG
CGTGGCCTCGCACTTCCTCTACAAAGAGCAGACCGTGCCTCGCGGGAGCG
CATCCGCAGGCGAACTCGATCTGCCATGGCTGGCCCGGATCATCGACTGG
GAGAAAGAAACCAGCGATCCCGACGAGTTCATGGCGAGCCTCAAGATCGA
CCTCGACCAGGAAGAGGTCTTCGTCTTCACGCCGAAGGGCGATGTCTTCA
CCTTGGTCACCGGTTCGACACCGATCGACTTCGCCTACGCGATCCACACC
GACGTCGGGCACAAGACCGTCGGCGCCAAGGTCAACGGCAGGCTGGTCGC
CCTCTCCGAAGAGCTGAACTCGGGCGAGACCGTCGAGATCTTCACGTCGA
AGTCCGAGGGCGCCGCGCCATCGCAAGACTGGCTGCTCTTCGTCCGGACG
CCACGGGCGGCGAGCAAGATCAAGCAGTGGTTCTCCCGAGAGCGTCGCGA
AGACGCGATCGCCCAGGGCCAGGAAGACATCCAGAAGGCGCTCCGCCGAG
ACGGCCTCCCGGTCCAGAAGATCCTCGGGTCGAAGATCCTCGACACCGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93457:2..751+

>mRNA_M-pyrifera_M_contig93457.21579.1 ID=mRNA_M-pyrifera_M_contig93457.21579.1|Name=mRNA_M-pyrifera_M_contig93457.21579.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig93457:2..751+ (Macrocystis pyrifera P11B4 male)
GATTCGGTGCGAGACTGCTATGCGGCGCTCGGTTCGATCCACGCAACCTG
GAAACCGGTCCAAGGCCGGTTCAAGGACTACGTGGCGATGCCCAAGTTCA
ACCTCTACCAGTCGTTGCACACCACCGTCGTCGGACCCCAGGGCAAACCG
ATCGAGGTGCAGATCCGAACCAACGAGATGCACAACCGTGCCGAGTTCGG
CGTGGCCTCGCACTTCCTCTACAAAGAGCAGACCGTGCCTCGCGGGAGCG
CATCCGCAGGCGAACTCGATCTGCCATGGCTGGCCCGGATCATCGACTGG
GAGAAAGAAACCAGCGATCCCGACGAGTTCATGGCGAGCCTCAAGATCGA
CCTCGACCAGGAAGAGGTCTTCGTCTTCACGCCGAAGGGCGATGTCTTCA
CCTTGGTCACCGGTTCGACACCGATCGACTTCGCCTACGCGATCCACACC
GACGTCGGGCACAAGACCGTCGGCGCCAAGGTCAACGGCAGGCTGGTCGC
CCTCTCCGAAGAGCTGAACTCGGGCGAGACCGTCGAGATCTTCACGTCGA
AGTCCGAGGGCGCCGCGCCATCGCAAGACTGGCTGCTCTTCGTCCGGACG
CCACGGGCGGCGAGCAAGATCAAGCAGTGGTTCTCCCGAGAGCGTCGCGA
AGACGCGATCGCCCAGGGCCAGGAAGACATCCAGAAGGCGCTCCGCCGAG
ACGGCCTCCCGGTCCAGAAGATCCTCGGGTCGAAGATCCTCGACACCGTC
GATTCGGTGCGAGACTGCTATGCGGCGCTCGGTTCGATCCACGCAACCTG
GAAACCGGTCCAAGGCCGGTTCAAGGACTACGTGGCGATGCCCAAGTTCA
ACCTCTACCAGTCGTTGCACACCACCGTCGTCGGACCCCAGGGCAAACCG
ATCGAGGTGCAGATCCGAACCAACGAGATGCACAACCGTGCCGAGTTCGG
CGTGGCCTCGCACTTCCTCTACAAAGAGCAGACCGTGCCTCGCGGGAGCG
CATCCGCAGGCGAACTCGATCTGCCATGGCTGGCCCGGATCATCGACTGG
GAGAAAGAAACCAGCGATCCCGACGAGTTCATGGCGAGCCTCAAGATCGA
CCTCGACCAGGAAGAGGTCTTCGTCTTCACGCCGAAGGGCGATGTCTTCA
CCTTGGTCACCGGTTCGACACCGATCGACTTCGCCTACGCGATCCACACC
GACGTCGGGCACAAGACCGTCGGCGCCAAGGTCAACGGCAGGCTGGTCGC
CCTCTCCGAAGAGCTGAACTCGGGCGAGACCGTCGAGATCTTCACGTCGA
AGTCCGAGGGCGCCGCGCCATCGCAAGACTGGCTGCTCTTCGTCCGGACG
CCACGGGCGGCGAGCAAGATCAAGCAGTGGTTCTCCCGAGAGCGTCGCGA
AGACGCGATCGCCCAGGGCCAGGAAGACATCCAGAAGGCGCTCCGCCGAG
ACGGCCTCCCGGTCCAGAAGATCCTCGGGTCGAAGATCCTCGACACCGTC
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