mRNA_M-pyrifera_M_contig93413.21574.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93413.21574.1
Unique NamemRNA_M-pyrifera_M_contig93413.21574.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A150H4L4_GONPE (Histone acetyltransferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H4L4_GONPE)

HSP 1 Score: 100 bits (248), Expect = 1.780e-22
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1 
Query:    7 DEDAGLSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSH 282
            D D  + S  ++TR+ FL LCQG +YQFD  RRA  S+ MVLYH+  P  P+F  SC++C  EI  G  FRC+ C D D+CA CK    H H
Sbjct: 1200 DPDGDMDSEFFETRQTFLSLCQGNHYQFDTLRRAKHSSMMVLYHLHNPHSPAFSSSCNLCQAEIEPGHGFRCTVCNDFDICASCKHNVGHMH 1291
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A7S2RCX7_9STRA (Histone acetyltransferase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RCX7_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.560e-22
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1 
Query:    7 DEDAGLSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSH 282
            D+D  + +  + TR+ FL LCQG  YQ+DQ RRA  S+ MVLYH+  PD+P F+HSC++C  EI+    ++C  CED D+C  C  K  H H
Sbjct: 1790 DDDPLMDNQFFDTRQQFLSLCQGNKYQYDQLRRAKHSSMMVLYHLHNPDEPGFVHSCNLCQQEIKEDSWWKCPVCEDFDVCNSCAAKKQHKH 1881
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A388LMI6_CHABU (Histone acetyltransferase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LMI6_CHABU)

HSP 1 Score: 96.7 bits (239), Expect = 2.930e-21
Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 1 
Query:    7 DEDAGLSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSH 282
            D+D  + S  + TR+ FL LCQG +YQ+D  RRA  S+ MVLYH+  P  P+++ +C++C  +I TG  +RC+ C+D DLC  CK + +H H
Sbjct: 1373 DKDEMMESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPGAPAYVCTCNICQKDIETGQGWRCTTCQDYDLCNVCKKEANHPH 1464
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A250XAH2_9CHLO (Histone acetyltransferase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAH2_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 2.940e-21
Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 1 
Query:    1 MVDEDAGLSSGIWKTRRDFLMLCQGG-YYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSH 282
            M D D  +    ++TR+ FL LCQG  +YQFD  RRA  S+ MVLYH+  PD P+   SC VC +EI  G  FRC+ C+D D+CA C+ +  H H
Sbjct: 1570 MQDPDPDMECDFFETRQSFLNLCQGNNHYQFDTIRRAKHSSMMVLYHLHNPDAPTVSTSCSVCTVEIEPGTGFRCTVCQDCDICAACQQRSPHPH 1664
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: I0YZA8_COCSC (Histone acetyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZA8_COCSC)

HSP 1 Score: 95.9 bits (237), Expect = 5.370e-21
Identity = 43/86 (50.00%), Postives = 54/86 (62.79%), Query Frame = 1 
Query:   34 IWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSHHTL 291
             + TR+ FL LCQG +YQFD  RRA  S+ MVLYH+  PD P+F  SC+ C +EI  G  FRCS C+D D+C  CK    H H  +
Sbjct:  733 FFDTRQAFLSLCQGNHYQFDSMRRAKHSSMMVLYHLHNPDAPAFSCSCNACGMEIEPGQGFRCSVCQDFDMCTNCKHTVGHQHQLI 818
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A8J9WNH4_9CHLO (Probable histone acetyltransferase HAC1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNH4_9CHLO)

HSP 1 Score: 95.1 bits (235), Expect = 1.020e-20
Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 1 
Query:   34 IWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSH 282
             + TR+ FL LCQG +YQFD  RRA  S+ MVLYH+  PD P+F  SC+ C +EI  G  FRCS C+D D+C  CK    H H
Sbjct: 1245 FFDTRQAFLSLCQGNHYQFDSMRRAKHSSMMVLYHLHNPDAPAFSCSCNACGMEIEPGQGFRCSVCQDFDMCTNCKHTVGHQH 1327
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A061S2G0_9CHLO (Histone acetyltransferase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S2G0_9CHLO)

HSP 1 Score: 93.6 bits (231), Expect = 3.520e-20
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 1 
Query:    7 DEDAGLSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSHHTL 291
            + D  + S I+ TR+ FL LCQG +YQF+  R    ++ M+LYH+  P  P+F  +C+VC+ EI  G  FRC+ C+D D+C  C+ +G H  H L
Sbjct: 1206 EPDPDIESEIFNTRQQFLSLCQGNHYQFNTIRNTRHTSMMLLYHLHNPSAPAFAGTCNVCSAEINPGDSFRCTVCDDFDMCRECRQQGVHHDHPL 1300
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A2R5G6D8_9STRA (Histone acetyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6D8_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.060e-20
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 1 
Query:    7 DEDAGLSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSH 282
            D D  + +  + TR+ FL LCQG +YQFDQ RRA  S+ MVLYH+  PD+P F+ +C+ C+ EI+    ++C+ CED D C  C     H H
Sbjct: 2050 DPDPLMDNQFFDTRQQFLSLCQGNHYQFDQLRRAKHSSMMVLYHLHNPDEPGFVTTCNTCSQEIKDDSWYKCTVCEDFDSCNKCHTTRPHPH 2141
[Close]
BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: A0A196S6H0_BLAHN (Histone acetyltransferase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6H0_BLAHN)

HSP 1 Score: 89.0 bits (219), Expect = 1.370e-18
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 1 
Query:    7 DEDAGLSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSHHTL 291
            D ++ + S +++ R+ FL +CQ  +YQFDQ RRA++ST MVLYH F P  P   HSC+ CN  I +G R+ C  C D DLC  C+ K  H H  +
Sbjct:  368 DFNSPILSRVFENRQVFLTVCQSYHYQFDQLRRAIFSTMMVLYHCFNPTIPICNHSCNECNDFIVSGKRWHCPICPDFDLCDKCRMKFSHQHELV 462
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BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Match: K0SP97_THAOC (Histone acetyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SP97_THAOC)

HSP 1 Score: 82.8 bits (203), Expect = 2.150e-16
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 1 
Query:    1 MVDEDAG-LSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYPDDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFC 258
            ++D+DA  + S  + TR+DFL LC+G +YQFD  RRA  ++ MVL+H+   + P F+  C  CN EI +G R  C  C D DLC  C
Sbjct: 1501 ILDDDADEIDSEFFNTRQDFLDLCRGNHYQFDDLRRAKHTSMMVLWHLQNREAPKFVQQCFSCNREISSGIRHHCPVCPDFDLCHEC 1587
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93413.21574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A150H4L4_GONPE1.780e-2248.91Histone acetyltransferase n=1 Tax=Gonium pectorale... [more]
A0A7S2RCX7_9STRA4.560e-2246.74Histone acetyltransferase n=1 Tax=labyrinthulid qu... [more]
A0A388LMI6_CHABU2.930e-2144.57Histone acetyltransferase n=1 Tax=Chara braunii Ta... [more]
A0A250XAH2_9CHLO2.940e-2147.37Histone acetyltransferase n=1 Tax=Chlamydomonas eu... [more]
I0YZA8_COCSC5.370e-2150.00Histone acetyltransferase n=1 Tax=Coccomyxa subell... [more]
A0A8J9WNH4_9CHLO1.020e-2051.81Probable histone acetyltransferase HAC1 n=1 Tax=Co... [more]
A0A061S2G0_9CHLO3.520e-2042.11Histone acetyltransferase (Fragment) n=1 Tax=Tetra... [more]
A0A2R5G6D8_9STRA9.060e-2044.57Histone acetyltransferase n=1 Tax=Hondaea fermenta... [more]
A0A196S6H0_BLAHN1.370e-1845.26Histone acetyltransferase n=1 Tax=Blastocystis sp.... [more]
K0SP97_THAOC2.150e-1644.83Histone acetyltransferase n=1 Tax=Thalassiosira oc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93413contigM-pyrifera_M_contig93413:19..309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score104.4
Seed ortholog evalue3.1e-20
Seed eggNOG ortholog3067.XP_002958386.1
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004402,GO:0006325,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0007275,GO:0008080,GO:0008150,GO:0008152,GO:0009791,GO:0009908,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022414,GO:0032501,GO:0032502,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0048367,GO:0048608,GO:0048731,GO:0048856,GO:0051276,GO:0061458,GO:0061733,GO:0071704,GO:0071840,GO:0090567,GO:1901564
EggNOG free text desc.homolog of the CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. ChromDB ID
EggNOG OGs34GS3@3041,37Q3J@33090,COG5076@1,KOG1778@2759
EC2.3.1.48
COG Functional cat.K
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Exons1
Model size291
Cds size291
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816846.5725377-CDS-M-pyrifera_M_contig93413:18..3091622816846.5725377-CDS-M-pyrifera_M_contig93413:18..309Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93413 19..309 +
1692278212.9595854-CDS-M-pyrifera_M_contig93413:18..3091692278212.9595854-CDS-M-pyrifera_M_contig93413:18..309Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93413 19..309 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93413.21574.1prot_M-pyrifera_M_contig93413.21574.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93413 19..309 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93413.21574.1

>prot_M-pyrifera_M_contig93413.21574.1 ID=prot_M-pyrifera_M_contig93413.21574.1|Name=mRNA_M-pyrifera_M_contig93413.21574.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
MVDEDAGLSSGIWKTRRDFLMLCQGGYYQFDQRRRALWSTFMVLYHMFYP
DDPSFIHSCDVCNIEIRTGFRFRCSKCEDVDLCAFCKDKGHHSHHTL
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mRNA from alignment at M-pyrifera_M_contig93413:19..309+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93413.21574.1 ID=mRNA_M-pyrifera_M_contig93413.21574.1|Name=mRNA_M-pyrifera_M_contig93413.21574.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig93413:19..309+ (Macrocystis pyrifera P11B4 male)
ATGGTTGATGAGGATGCTGGACTGAGTAGTGGTATTTGGAAAACAAGACG
TGACTTCCTTATGCTTTGTCAAGGTGGATATTACCAGTTTGATCAACGGC
GTCGTGCTTTGTGGTCAACATTCATGGTCCTCTATCACATGTTCTACCCT
GACGATCCATCTTTCATCCACTCTTGTGATGTTTGCAATATCGAAATTCG
CACTGGGTTCCGTTTTCGTTGTTCCAAATGTGAAGACGTGGATTTGTGCG
CGTTTTGCAAGGACAAAGGACATCACAGCCATCATACTCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93413:19..309+

>mRNA_M-pyrifera_M_contig93413.21574.1 ID=mRNA_M-pyrifera_M_contig93413.21574.1|Name=mRNA_M-pyrifera_M_contig93413.21574.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig93413:19..309+ (Macrocystis pyrifera P11B4 male)
ATGGTTGATGAGGATGCTGGACTGAGTAGTGGTATTTGGAAAACAAGACG
TGACTTCCTTATGCTTTGTCAAGGTGGATATTACCAGTTTGATCAACGGC
GTCGTGCTTTGTGGTCAACATTCATGGTCCTCTATCACATGTTCTACCCT
GACGATCCATCTTTCATCCACTCTTGTGATGTTTGCAATATCGAAATTCG
CACTGGGTTCCGTTTTCGTTGTTCCAAATGTGAAGACGTGGATTTGTGCG
CGTTTTGCAAGGACAAAGGACATCACAGCCATCATACTCTCATGGTTGAT
GAGGATGCTGGACTGAGTAGTGGTATTTGGAAAACAAGACGTGACTTCCT
TATGCTTTGTCAAGGTGGATATTACCAGTTTGATCAACGGCGTCGTGCTT
TGTGGTCAACATTCATGGTCCTCTATCACATGTTCTACCCTGACGATCCA
TCTTTCATCCACTCTTGTGATGTTTGCAATATCGAAATTCGCACTGGGTT
CCGTTTTCGTTGTTCCAAATGTGAAGACGTGGATTTGTGCGCGTTTTGCA
AGGACAAAGGACATCACAGCCATCATACTCTC
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