mRNA_M-pyrifera_M_contig93408.21569.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93408.21569.1
Unique NamemRNA_M-pyrifera_M_contig93408.21569.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A3D4UNS8_9BACT (Uncharacterized protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UNS8_9BACT)

HSP 1 Score: 351 bits (900), Expect = 3.320e-118
Identity = 169/251 (67.33%), Postives = 211/251 (84.06%), Query Frame = 1
Query:    1 TLALARAINLKKGTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTEQHD 753
            T+ALARAINLK+ T+GAVS+AECWYA P+P W  T+IGNTK R  E  +  P  FDP+G+LITDTGSW+QLAP+ AFL+PRL++TT++DHHLQGD EIA RRL++T+AAAVVQP A++C  LLG+ + ++LP +IAT LYVGLATDTGWFKHS+V+  VM LAG LL AGV+H+ LFAMLYQRDRA R +LM  AL S+++IHDK+ A+M+L  +DFK+ GAAPG+SGGFVD+PQSVASIRVVA+LTEQ D
Sbjct:   56 TIALARAINLKRETTGAVSAAECWYAAPMPEWSKTIIGNTKARIIEDHQPIPGAFDPEGILITDTGSWSQLAPFAAFLKPRLERTTMIDHHLQGDAEIATRRLLDTNAAAVVQPVAEVCCHLLGVENPSQLPTDIATALYVGLATDTGWFKHSNVDGRVMRLAGQLLDAGVNHTKLFAMLYQRDRATRFKLMARALESMQLIHDKHAAIMTLKLEDFKETGAAPGESGGFVDIPQSVASIRVVAILTEQKD 306          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A2A4RMC9_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RMC9_9BACT)

HSP 1 Score: 340 bits (871), Expect = 8.910e-114
Identity = 163/251 (64.94%), Postives = 202/251 (80.48%), Query Frame = 1
Query:    1 TLALARAINLKKGTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTEQHD 753
            ++ALARAIN+   TSGA   AECWYA P+PSW  T+IGNTK +  E  +  P  FDP+G+LITDTGSWNQLAP+  FL+PRLD+TTI+DHHLQGD EIA RRLI++ AAA VQP A+IC  LLG+ S A+LP++IA PLYVGLATDTGWFKHS+V+  VM LAG LL  GV+H+++FAMLYQRDR +R +LM  AL S+E++ +KN A+M++  QDFKD  A PG++GGFVDLPQSVA+IRVVA+LTEQ D
Sbjct:   58 SIALARAINIASETSGAACKAECWYAAPMPSWAKTIIGNTKAKTIEDHQPMPGAFDPEGILITDTGSWNQLAPFTEFLKPRLDRTTIIDHHLQGDAEIATRRLIDSTAAAAVQPVAEICCILLGVESPADLPVDIAMPLYVGLATDTGWFKHSNVDGRVMRLAGQLLDTGVNHTSIFAMLYQRDRTSRFKLMARALESMEIVKEKNAAIMTVTLQDFKDTKAGPGETGGFVDLPQSVAAIRVVAILTEQKD 308          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A3M2CI99_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CI99_9BACT)

HSP 1 Score: 308 bits (790), Expect = 1.080e-101
Identity = 150/251 (59.76%), Postives = 194/251 (77.29%), Query Frame = 1
Query:    1 TLALARAINLKKGTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTEQHD 753
            TLALAR IN    T+GA+S+AECWY  P+P W  T+ G+TK R  E G+  P  FDP+ V+I DTGSW QL P++ F+E RL++T I+DHHLQGD EIA  RL++T AAAVVQP A++C  LLGL+S  +LP++IA+ LY+GLATDTGWF+HS+V+  VM LA DLL AGVDH+ L  ++ Q DR +RLRLM  AL +LE+I +K+ A+M+L   DF++AGAAPG+SGGFVD+P++V SIRVVALLTEQ D
Sbjct:   44 TLALARTINKVHRTTGAISAAECWYGAPMPEWTPTVTGSTKIRTIEPGQPVPGAFDPEAVIICDTGSWAQLDPFREFIEERLERTAIIDHHLQGDAEIADHRLLDTSAAAVVQPVAEVCCRLLGLSSPGQLPVDIASALYMGLATDTGWFRHSNVDARVMRLAADLLEAGVDHAGLMELIEQNDRPSRLRLMQRALANLELIEEKHAAIMTLTTADFREAGAAPGESGGFVDIPRTVPSIRVVALLTEQTD 294          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A7C5WMZ6_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C5WMZ6_9BACT)

HSP 1 Score: 253 bits (645), Expect = 9.470e-80
Identity = 123/253 (48.62%), Postives = 175/253 (69.17%), Query Frame = 1
Query:    1 TLALARAINLKKGTS-----GAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTE 744
            TLA+ARA+N+  G S     G  S AE WY GP+P W  ++  +TK R  +     P   +P  V++ DTG+W+QLA Y+ +L+ + D+  ++DHHL GDG++A  RL++  AAA  +  A +C  L+G++S A LP+E+A PLY+G+ATDTGWF+HS+VN  V+ LA DLL  GV+H   + M+ QR+RA RLRL+  ALNSLE+  D  +A++SL + DF+ AGAAPG+SGGF+DL ++V S+RV  LLTE
Sbjct:   40 TLAVARALNIAAGGSAAGFSGVASRAEAWYTGPMPGWWRSVARDTKTRLIDEHNPPPGAHEPDAVMVLDTGAWSQLAGYRPWLDAQHDRAVLIDHHLNGDGDVARMRLVDKSAAAACEIVAGLCARLIGVDSPASLPVEVAEPLYLGIATDTGWFRHSNVNPRVLRLAADLLETGVEHERFYEMVEQRERAGRLRLLARALNSLELHDDDRVAIISLRQNDFEKAGAAPGESGGFLDLIKTVESVRVAVLLTE 292          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A2E2NBS4_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2NBS4_9BACT)

HSP 1 Score: 236 bits (601), Expect = 5.290e-73
Identity = 122/253 (48.22%), Postives = 164/253 (64.82%), Query Frame = 1
Query:    1 TLALARAINLKKGTS-----GAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTE 744
            ++ALARA+N+  G S     G  S AE W+ GP P W   + G+ K R  +     P   DP  V+I DTG+W+QL P + +L  R     ++DHHL+GD ++ A RL+ET AAA  Q  A +C +LLG  S  +LP+E+ATPLY+GLATDTGWF+H++V    M  A DLL  GVDH AL AM+ QRD+ +RL L+  AL SLE   +  +A+M L + DF + GA+PGDSGGF+D+ ++V  IRV ALLTE
Sbjct:   44 SVALARALNIAAGGSPGGFSGVASRAEVWFHGPPPPWLGAVAGDVKRRQIDNEYGIPATADPDAVVIVDTGAWSQLRPLEEWLSDRTGSCLVIDHHLRGDADVGATRLVETKAAAACQIVAPLCASLLGKTSITDLPVEVATPLYLGLATDTGWFRHANVTPAAMRTAADLLETGVDHEALHAMIEQRDKPSRLALLQRALASLEYHAEGAVAMMKLRQADFAETGASPGDSGGFLDVVRTVEVIRVAALLTE 296          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A7C3L102_9BACT (DHH domain-containing protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3L102_9BACT)

HSP 1 Score: 216 bits (550), Expect = 7.670e-66
Identity = 114/229 (49.78%), Postives = 150/229 (65.50%), Query Frame = 1
Query:    1 TLALARAINLKKGTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVI----HDKNLAVMSLIEQDFKDAGAAPG 675
            TLAL RA+NL     G    AE WYAGP P W   + G T           P   DP+ V+I DTGSW QL P+  ++  RLD T IVDHH+QGD ++A  R+I+T AAA  QP AD+C  +LGL S A+LP +IATPLY+GLATDTGWF+HS+V + VM  AG+L+ AG ++  L+ ++ QR+   RLRL+  AL SLE++    + +++AVMSL  +DF DAGA PG
Sbjct:   97 TLALVRALNLSS-PFGPTPRAEAWYAGPFPPWLDDVRGQTPVMRLGDKATPPDHIDPEAVVILDTGSWTQLEPFADWIRKRLDTTAIVDHHVQGDADVAQLRVIDTTAAAACQPVADLCRHILGLPSLAKLPPDIATPLYLGLATDTGWFRHSNVTKSVMTTAGELIEAGAENVRLYQIVEQRESPGRLRLLARALASLELVPLDNNGQHIAVMSLSNRDFADAGAEPG 324          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A3M2BQI8_9BACT (Bifunctional oligoribonuclease/PAP phosphatase NrnA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BQI8_9BACT)

HSP 1 Score: 216 bits (551), Expect = 3.180e-65
Identity = 123/250 (49.20%), Postives = 158/250 (63.20%), Query Frame = 1
Query:    1 TLALARAINLKKGTS--GAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTE 744
            +LAL RAI   + TS  G    AE W+ GP+P W S +   TK R     +  P + DP  V+I DTGS +QL     + E R ++  I+DHH  GD  +AA R I+T AAAV Q  A +C +L+G+ S A+L   IA  LY+GLATDTGWFKHS+V   VM LA DLL  GV+H  L+  + QRDR ARLRLM  ALNSLE   D   A+MS+ ++DF + GAAP D GG VD+P++V ++RV  LLTE
Sbjct:   79 SLALVRAIAASRHTSPSGVACPAEAWFTGPLPLWLSAVSRQTKSRSIGATDPLPAL-DPDLVVIVDTGSRDQLDCLADWAEARAERAIIIDHHRSGDAHLAALRYIDTDAAAVCQTLAPLCASLVGVPSPAQLDESIAEALYLGLATDTGWFKHSNVTPAVMRLAADLLETGVNHERLYQNVEQRDRPARLRLMARALNSLEFALDGACALMSIRQKDFDETGAAPQDVGGLVDIPKTVETVRVSVLLTE 327          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A5M4D892_9CYAN (Bifunctional oligoribonuclease/PAP phosphatase NrnA n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D892_9CYAN)

HSP 1 Score: 214 bits (545), Expect = 8.620e-65
Identity = 119/250 (47.60%), Postives = 156/250 (62.40%), Query Frame = 1
Query:    1 TLALARAI--NLKKGTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTE 744
            +LAL RA+  N +   S     AE WY GP+P + + +   TK R     +  P  FDP+ +++ DTGSW+QL  +  ++ PR  +T ++DHH  GD + A  R I+T AAAV Q    +C  L  + S A L   IA PLY+GLATDTGWF+HS+V   VMHLA DL+ AG +H  LF ++ QRDR ARLRLM  AL SL+   +   AVMSL +QDF + GAAP D GGFVD+P+SV  + V  LLTE
Sbjct:   40 SLALVRAVAANRRTSPSSVACPAEAWYTGPMPLFFNAVSRQTKARCFGATDELPA-FDPELLVVVDTGSWSQLDNFADWVRPRAARTIVIDHHRNGDPDTATMRHIDTSAAAVCQTLGTLCARLTRVASPAHLDESIAEPLYLGLATDTGWFRHSNVTPAVMHLAADLIEAGTNHERLFQVVEQRDRPARLRLMARALASLQFEMNGICAVMSLRQQDFDETGAAPQDVGGFVDIPKSVEQVLVSCLLTE 288          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: UPI001ACBDEA7 (Bifunctional oligoribonuclease and PAP phosphatase NrnA n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001ACBDEA7)

HSP 1 Score: 214 bits (545), Expect = 1.080e-64
Identity = 115/250 (46.00%), Postives = 161/250 (64.40%), Query Frame = 1
Query:    1 TLALARAINLKK--GTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTE 744
            +LAL RA+NL    G     + AE WY GP+P W   + G+T +R  ++G M P V     V++ DTGSW QL   + ++  R +  +++DHH+QG+  +A RR I+T AAA  QP A++C  LLG  S AELP  +A  LY+GLATDTGWF+HS+VN  VM  AG+LL A  D+  L+ ++ QR+  +RL+L+  AL SLE+     +AVM+L  +DF  A A PG+SGGFVD  Q+++ + V ALLTE
Sbjct:   42 SLALVRALNLPGAWGPWVPANRAEAWYFGPMPPWLRDIAGDTPYRVLDSGGM-PEVDGLDAVVVVDTGSWLQLEALREWITARHEMVSLIDHHVQGNAAVAPRRHIDTSAAAACQPVAELCRLLLGKGSLAELPGPVAEMLYLGLATDTGWFRHSNVNHRVMETAGELLDAKADNVRLYQVVEQRESVSRLKLLSRALASLELFDHDRIAVMTLTREDFHGAHAQPGESGGFVDFGQAISGVLVTALLTE 290          
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Match: A0A7L9BV65_9BACT (Bifunctional oligoribonuclease/PAP phosphatase NrnA n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7L9BV65_9BACT)

HSP 1 Score: 211 bits (538), Expect = 1.350e-63
Identity = 111/242 (45.87%), Postives = 153/242 (63.22%), Query Frame = 1
Query:   19 AINLKKGTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEMNPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAARRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWFKHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLEVIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTE 744
            A+ L +  +    +A  W+AGP+P W +   G T F   E         +P GV++ DTGSW QL     +L  R  KT ++DHH +GD ++  RR+IET  AA  QP A +C ALLG+  A+ LP+ +A  LY+GLATDTGWF+HS+V+ +VM LA  LL AG D  AL+  + Q++ AAR RLM  AL SLE+     + V+SL  +DFK+AGA+  +SGGF+DLPQ++ S+ V  LLTE
Sbjct:   47 AVGLVRALAAKGIAARAWFAGPLPGWLAWFAGETGFGAWERD--GAPADEPDGVVVVDTGSWTQLEAQAPWLRGRGGKTLVIDHHRRGDADVGERRVIETAKAAACQPVAALCAALLGVE-ASRLPVGVAQALYLGLATDTGWFRHSNVSPEVMRLAASLLEAGADAEALYRNIEQQNTAARFRLMARALASLELAGGGRVGVISLTAKDFKEAGASADESGGFIDLPQTIGSVEVSVLLTE 285          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93408.21569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D4UNS8_9BACT3.320e-11867.33Uncharacterized protein n=2 Tax=Phycisphaerae TaxI... [more]
A0A2A4RMC9_9BACT8.910e-11464.94Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
A0A3M2CI99_9BACT1.080e-10159.76Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7C5WMZ6_9BACT9.470e-8048.62Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
A0A2E2NBS4_9BACT5.290e-7348.22Uncharacterized protein n=1 Tax=Phycisphaerae bact... [more]
A0A7C3L102_9BACT7.670e-6649.78DHH domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A3M2BQI8_9BACT3.180e-6549.20Bifunctional oligoribonuclease/PAP phosphatase Nrn... [more]
A0A5M4D892_9CYAN8.620e-6547.60Bifunctional oligoribonuclease/PAP phosphatase Nrn... [more]
UPI001ACBDEA71.080e-6446.00Bifunctional oligoribonuclease and PAP phosphatase... [more]
A0A7L9BV65_9BACT1.350e-6345.87Bifunctional oligoribonuclease/PAP phosphatase Nrn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93408contigM-pyrifera_M_contig93408:2..754 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score129.8
Seed ortholog evalue1.8e-27
Seed eggNOG ortholog1142394.PSMK_20750
Preferred namenrnA
KEGG rclassRC00078
KEGG koko:K00974,ko:K06881
KEGG ReactionR00188,R00508,R09382,R09383,R09384,R09386
KEGG Pathwayko00920,ko01100,ko01120,ko03013,map00920,map01100,map01120,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0040007
EggNOG free text desc.phosphoesterase RecJ domain protein
EggNOG OGs2IYQ0@203682,COG0618@1,COG0618@2
EC2.7.7.72,3.1.13.3,3.1.3.7
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016,ko03400
Exons1
Model size753
Cds size753
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816846.26334-CDS-M-pyrifera_M_contig93408:1..7541622816846.26334-CDS-M-pyrifera_M_contig93408:1..754Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93408 2..754 +
1692278212.786492-CDS-M-pyrifera_M_contig93408:1..7541692278212.786492-CDS-M-pyrifera_M_contig93408:1..754Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93408 2..754 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93408.21569.1prot_M-pyrifera_M_contig93408.21569.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93408 2..754 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93408.21569.1

>prot_M-pyrifera_M_contig93408.21569.1 ID=prot_M-pyrifera_M_contig93408.21569.1|Name=mRNA_M-pyrifera_M_contig93408.21569.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=251bp
TLALARAINLKKGTSGAVSSAECWYAGPIPSWGSTLIGNTKFRHEETGEM
NPTVFDPKGVLITDTGSWNQLAPYKAFLEPRLDKTTIVDHHLQGDGEIAA
RRLIETHAAAVVQPAADICVALLGLNSAAELPLEIATPLYVGLATDTGWF
KHSSVNRDVMHLAGDLLAAGVDHSALFAMLYQRDRAARLRLMGIALNSLE
VIHDKNLAVMSLIEQDFKDAGAAPGDSGGFVDLPQSVASIRVVALLTEQH
D
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mRNA from alignment at M-pyrifera_M_contig93408:2..754+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93408.21569.1 ID=mRNA_M-pyrifera_M_contig93408.21569.1|Name=mRNA_M-pyrifera_M_contig93408.21569.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=753bp|location=Sequence derived from alignment at M-pyrifera_M_contig93408:2..754+ (Macrocystis pyrifera P11B4 male)
ACGCTCGCGCTCGCGCGTGCGATCAATCTCAAGAAGGGTACAAGCGGCGC AGTCTCGTCGGCAGAGTGCTGGTACGCAGGTCCCATCCCATCCTGGGGAT CGACACTGATCGGGAACACGAAGTTCCGTCACGAGGAAACGGGTGAGATG AACCCGACTGTGTTCGATCCTAAAGGGGTGCTGATCACAGACACAGGATC ATGGAATCAGCTCGCGCCGTACAAAGCGTTCCTTGAGCCCAGACTCGACA AGACGACGATCGTGGATCATCATCTGCAAGGGGACGGCGAGATCGCTGCG CGCCGTCTGATCGAGACACATGCCGCGGCGGTCGTCCAGCCTGCCGCAGA TATCTGCGTCGCATTGCTCGGGCTCAACAGCGCCGCAGAGTTGCCCCTCG AGATCGCGACGCCGCTGTATGTGGGACTTGCGACAGACACAGGATGGTTC AAGCACTCAAGCGTCAATCGGGATGTGATGCATCTCGCGGGGGATCTGCT CGCAGCGGGGGTCGATCACTCGGCGCTCTTCGCGATGCTCTATCAGCGAG ATCGCGCAGCGCGACTCCGTTTGATGGGTATCGCACTCAACTCGCTGGAA GTGATCCACGACAAGAATCTTGCAGTGATGTCGCTAATAGAGCAGGATTT CAAAGACGCGGGAGCAGCTCCAGGTGATTCGGGAGGATTTGTCGATCTTC CCCAGTCTGTCGCGTCGATCCGCGTCGTGGCGCTGCTCACAGAGCAGCAC GAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93408:2..754+

>mRNA_M-pyrifera_M_contig93408.21569.1 ID=mRNA_M-pyrifera_M_contig93408.21569.1|Name=mRNA_M-pyrifera_M_contig93408.21569.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1506bp|location=Sequence derived from alignment at M-pyrifera_M_contig93408:2..754+ (Macrocystis pyrifera P11B4 male)
ACGCTCGCGCTCGCGCGTGCGATCAATCTCAAGAAGGGTACAAGCGGCGC
AGTCTCGTCGGCAGAGTGCTGGTACGCAGGTCCCATCCCATCCTGGGGAT
CGACACTGATCGGGAACACGAAGTTCCGTCACGAGGAAACGGGTGAGATG
AACCCGACTGTGTTCGATCCTAAAGGGGTGCTGATCACAGACACAGGATC
ATGGAATCAGCTCGCGCCGTACAAAGCGTTCCTTGAGCCCAGACTCGACA
AGACGACGATCGTGGATCATCATCTGCAAGGGGACGGCGAGATCGCTGCG
CGCCGTCTGATCGAGACACATGCCGCGGCGGTCGTCCAGCCTGCCGCAGA
TATCTGCGTCGCATTGCTCGGGCTCAACAGCGCCGCAGAGTTGCCCCTCG
AGATCGCGACGCCGCTGTATGTGGGACTTGCGACAGACACAGGATGGTTC
AAGCACTCAAGCGTCAATCGGGATGTGATGCATCTCGCGGGGGATCTGCT
CGCAGCGGGGGTCGATCACTCGGCGCTCTTCGCGATGCTCTATCAGCGAG
ATCGCGCAGCGCGACTCCGTTTGATGGGTATCGCACTCAACTCGCTGGAA
GTGATCCACGACAAGAATCTTGCAGTGATGTCGCTAATAGAGCAGGATTT
CAAAGACGCGGGAGCAGCTCCAGGTGATTCGGGAGGATTTGTCGATCTTC
CCCAGTCTGTCGCGTCGATCCGCGTCGTGGCGCTGCTCACAGAGCAGCAC
GACACGCTCGCGCTCGCGCGTGCGATCAATCTCAAGAAGGGTACAAGCGG
CGCAGTCTCGTCGGCAGAGTGCTGGTACGCAGGTCCCATCCCATCCTGGG
GATCGACACTGATCGGGAACACGAAGTTCCGTCACGAGGAAACGGGTGAG
ATGAACCCGACTGTGTTCGATCCTAAAGGGGTGCTGATCACAGACACAGG
ATCATGGAATCAGCTCGCGCCGTACAAAGCGTTCCTTGAGCCCAGACTCG
ACAAGACGACGATCGTGGATCATCATCTGCAAGGGGACGGCGAGATCGCT
GCGCGCCGTCTGATCGAGACACATGCCGCGGCGGTCGTCCAGCCTGCCGC
AGATATCTGCGTCGCATTGCTCGGGCTCAACAGCGCCGCAGAGTTGCCCC
TCGAGATCGCGACGCCGCTGTATGTGGGACTTGCGACAGACACAGGATGG
TTCAAGCACTCAAGCGTCAATCGGGATGTGATGCATCTCGCGGGGGATCT
GCTCGCAGCGGGGGTCGATCACTCGGCGCTCTTCGCGATGCTCTATCAGC
GAGATCGCGCAGCGCGACTCCGTTTGATGGGTATCGCACTCAACTCGCTG
GAAGTGATCCACGACAAGAATCTTGCAGTGATGTCGCTAATAGAGCAGGA
TTTCAAAGACGCGGGAGCAGCTCCAGGTGATTCGGGAGGATTTGTCGATC
TTCCCCAGTCTGTCGCGTCGATCCGCGTCGTGGCGCTGCTCACAGAGCAG
CACGAC
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