mRNA_M-pyrifera_M_contig93299.21543.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: R1CM22_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CM22_EMIHU) HSP 1 Score: 60.8 bits (146), Expect = 2.770e-7 Identity = 67/232 (28.88%), Postives = 103/232 (44.40%), Query Frame = 1 Query: 13 LVLCGLAAAGKSTWAQAIAAEEGVVSVDKTAAVGLQETDQYDDFPTKVQLLPKVVSYDEEMANVSVE------DEGAWKEERDRVKGKVKELL---------IAQRHRLGQSETGKGEERDLEEDGCELPMIGLMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRM--LLQWEEP-REKWERLTIRLNEKSSLSSG 654 +++CGL AAGKST + A+ + + + A G+ + +S+D+ + N++ W + RD V V+ A +LG+S G G G + ++++DDNM YRSMRR Y +LA++ G C + + P A L+ RNA R+ ARV T+ M +LQW +P R WE TI L SS +G Sbjct: 17 VLMCGLPAAGKSTLSAALLRDGAKELLPRLAPFGVSAVRVF------------WLSFDDVLGNLAAACGHTGYSPELWHQARDSVLRSVRHHFGVACGDGPPPAPLAQLGESGGGSGSXXGAPASGGD--SFDVVLLDDNMHYRSMRRVYHRLARDGRLGCCTLCL-------PLPLAEALR-RNAARQESARVADATVSHMAEVLQWPDPARHPWECSTISLPSASSSGAG 226
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: UPI00193E5200 (L-seryl-tRNA(Sec) kinase n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193E5200) HSP 1 Score: 60.1 bits (144), Expect = 4.580e-7 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 367 LMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQ--ERNAGREADARVERDTIDRM--LLQWEEPREKWERLTIRLNEKSSLSS 651 L+V+DDNM+YRSMR EY +LA++L G+CQ+ +E AT+ Q + NA RE ++V I RM L++ + + +WE+L + SSL S Sbjct: 100 LIVIDDNMYYRSMRYEYFKLAKQLRVGFCQIFME----------ATLEQSLQVNAEREFSSKVPESIILRMNDLIEIPDRKNQWEKLAVSFPFHSSLQS 188
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: R1CDE5_EMIHU (Phosphoseryl-tRNA kinase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CDE5_EMIHU) HSP 1 Score: 60.1 bits (144), Expect = 6.240e-7 Identity = 67/230 (29.13%), Postives = 101/230 (43.91%), Query Frame = 1 Query: 19 LCGLAAAGKSTWAQAIAAEEGVVSVDKTAAVGLQETDQYDDFPTKVQLLPKVVSYDEEMANVSVE------DEGAWKEERDRVKGKVKELL---------IAQRHRLGQSETGKGEERDLEEDGCELPMIGLMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRM--LLQWEEP-REKWERLTIRLNEKSSLSSG 654 +CGL AAGKST + A+ + + + A G+ + +S+D+ + N++ W + RD V V+ A +LG+S G G G + ++++DDNM YRSMRR Y +LA++ G C + + P A L+ RNA R+ ARV T+ M +LQW +P R WE TI L SS +G Sbjct: 1 MCGLPAAGKSTLSAALLRDGAKELLPRLAPFGVSAVRVF------------WLSFDDVLGNLAAACGHTGYSPELWHQARDSVLRSVRHHFGVACGDGPPPAPLAQLGESGGGSGSXXGAPASGGD--SFDVVLLDDNMHYRSMRRVYHRLARDGRLGCCTLCL-------PLPLAEALR-RNAARQESARVADATVSHMAEVLQWPDPARHPWECSTISLPSASSSGAG 208
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: UPI001D07218D (L-seryl-tRNA(Sec) kinase n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D07218D) HSP 1 Score: 57.8 bits (138), Expect = 2.350e-6 Identity = 27/88 (30.68%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 367 LMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRMLLQWEEPREKWERLTIRLN 630 L+++DDNM+YRSMR E+ +L+++ + +CQ+ +++ D ++ ERN R + + + I M ++E+P E WE+ ++ N Sbjct: 95 LLIIDDNMYYRSMRYEFFKLSRQFQISFCQIFIDLELD--------VILERNKLRSSSEIISDEIIKNMYKKFEKPMENWEKYSLIFN 174
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: A0A0B6YNA6_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YNA6_9EUPU) HSP 1 Score: 54.7 bits (130), Expect = 2.490e-6 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 367 LMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRMLLQWEEP 594 L+VVDDNM++RSMR EY +LA+ + GYCQ+ V+ + + ERN GRE +V + I +ML ++E P Sbjct: 10 LLVVDDNMYFRSMRYEYYKLAKRYQTGYCQIQVKCSIEKA--------MERNKGRENIHQVPEEIILKMLDKFEPP 77
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: A0A8B8A8Q8_CRAVI (L-seryl-tRNA(Sec) kinase-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8A8Q8_CRAVI) HSP 1 Score: 57.8 bits (138), Expect = 3.090e-6 Identity = 65/230 (28.26%), Postives = 111/230 (48.26%), Query Frame = 1 Query: 10 VLVLCGLAAAGKSTWAQAIAAEEGVVSVDKTAAVGLQETDQYDDFPTKVQLLPKVVSYDE------EMANVSVEDEGAWKEERDRVKGKVKELL--IAQRHRLGQSETGKGEERDLEEDGCELPMIGL---------MVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRMLLQWEEP---REKWERLTIRLNEKS 639 V+VLCG+ +GKST+A+++ ++ ++ + GL+ D T LL VSYD+ E + E AWKE R+ ++ V+ ++ + + +S T E D + EL + L +++DDNM+Y SMR +Y QLA++ +CQV +E + A I + R+ V D I +M +++E P + WE+ +I +N S Sbjct: 6 VVVLCGIPGSGKSTFAKSMITKQ--TPLENSVDWGLRN-----DSTTTHWLL---VSYDDIIPSDLEKDIIEKEIPNAWKECRENIQNAVENIVRELQKNTVAPESYTTGKETSDCHFESFELFLQSLTHREDGTVVILIDDNMYYSSMRHKYYQLARKYGVAFCQVHIEC-----DPNLALIRNRQRLSRQ----VPDDVILKMAMRFEVPNPDQNSWEKHSITVNTNS 216
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: UPI00145567A4 (L-seryl-tRNA(Sec) kinase-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145567A4) HSP 1 Score: 57.8 bits (138), Expect = 3.440e-6 Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 346 CELPMIGLM-VVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRMLLQWEEPREK---WERLTIR-LNEKSSLSSGLAQVWTLVALA 687 CEL ++ ++DDNMFYRSMR EY QLA++ G+CQ+ ++ D + RNA R+ V +TI +M + E P ++ WER ++ L E L+ +W+L++ A Sbjct: 169 CELETSSIVFLIDDNMFYRSMRYEYYQLARKHSAGFCQIYLQCSSDEAIA--------RNAKRQQ--AVSMETIIKMAGKMEAPNQQAASWERNVVQILVENVDSDDTLSALWSLISRA 277
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: A0A482WN31_LAOST (Uncharacterized protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482WN31_LAOST) HSP 1 Score: 57.4 bits (137), Expect = 3.650e-6 Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 367 LMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRM--LLQWEEPREKWERLTIRLNEKSSLSSGLAQVWTLV 678 L+V+DDNM+YRSMR EY +L++ ++ G+CQ+ +E + S ++ ERN ++V TI RM L++ + + WE+LTI + + SL + + ++ LV Sbjct: 105 LLVIDDNMYYRSMRYEYFKLSKLMKVGFCQIFMEANLEQS----ISVNSERNIS----SQVPVGTIRRMNDLIERPDVKNHWEKLTISIPFRYSLENSIHRIECLV 202
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: A0A7S3RN27_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RN27_EMIHU) HSP 1 Score: 56.6 bits (135), Expect = 4.670e-6 Identity = 46/124 (37.10%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 292 LGQSETGKGEERDLEEDGCELPMIGLMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRM--LLQWEEP-REKWERLTIRLNEKSSLSSG 654 LG+S G G G + ++++DDNM YRSMRR Y +LA++ G C + + P A L+ RNA R+ ARV T+ M +LQW +P R WE TI L SS +G Sbjct: 83 LGESGGGSGSXXGAPASGGD--SFDVVLLDDNMHYRSMRRVYHRLARDGRLGCCTLCL-------PLPLAEALR-RNAARQESARVADATVSHMAEVLQWPDPARHPWECSTISLPSASSSGAG 196
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Match: UPI001457F88A (L-seryl-tRNA(Sec) kinase-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457F88A) HSP 1 Score: 57.4 bits (137), Expect = 4.680e-6 Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1 Query: 367 LMVVDDNMFYRSMRREYCQLAQELECGYCQVVVEVVGDGSPTSQATILQERNAGREADARVERDTIDRMLLQWEEPRE---KWERLTIRLNEKSSLSSGLAQVWTLVALA 687 ++V+DDNM+YRSMR +Y QLA++ E G+CQV + + + +ERN+ R+ RV + I M + E P WE+ + L S+ S L + TLV A Sbjct: 185 VLVIDDNMYYRSMRYKYFQLARKYEQGFCQVHLRCTEE--------LAKERNSKRQV-RRVPDEVISTMATKMEVPDSLEFPWEKYFLILESSSNFQSQLCDIDTLVRSA 285 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93299.21543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig93299.21543.1 >prot_M-pyrifera_M_contig93299.21543.1 ID=prot_M-pyrifera_M_contig93299.21543.1|Name=mRNA_M-pyrifera_M_contig93299.21543.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=231bp MQVVLVLCGLAAAGKSTWAQAIAAEEGVVSVDKTAAVGLQETDQYDDFPTback to top mRNA from alignment at M-pyrifera_M_contig93299:16..708+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig93299.21543.1 ID=mRNA_M-pyrifera_M_contig93299.21543.1|Name=mRNA_M-pyrifera_M_contig93299.21543.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=693bp|location=Sequence derived from alignment at M-pyrifera_M_contig93299:16..708+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig93299:16..708+ >mRNA_M-pyrifera_M_contig93299.21543.1 ID=mRNA_M-pyrifera_M_contig93299.21543.1|Name=mRNA_M-pyrifera_M_contig93299.21543.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1386bp|location=Sequence derived from alignment at M-pyrifera_M_contig93299:16..708+ (Macrocystis pyrifera P11B4 male)back to top |