mRNA_M-pyrifera_M_contig93298.21542.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93298.21542.1
Unique NamemRNA_M-pyrifera_M_contig93298.21542.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A7S4K983_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K983_9EUKA)

HSP 1 Score: 105 bits (261), Expect = 3.160e-27
Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 1
Query:    1 IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVVAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVVCS 312
            IGY+  NL A SYDWR+PP+ LE+RDG FT +K QIE +H    +K +V+ HS+G R+  YFL WV  E + G EW   H++ +VA G  +LG+PK  R++ CS
Sbjct:    2 IGYTYSNLVACSYDWRIPPNKLEERDGYFTFLKFQIEALHLVNKEKVMVMGHSMGNRIFHYFLNWV--EVKFGSEWVDEHVEGWVALGAPFLGAPKVMRTL-CS 102          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A2P6NUW2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUW2_9EUKA)

HSP 1 Score: 108 bits (269), Expect = 4.050e-25
Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 1
Query:    4 GYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHR-NCGQKTVVVAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVV 306
            GY  ++L+A++YDWR+PP  LE+RD   T+M   IE + + N G+K V++AHS+G RLVQYFL W  AE+  G EW   ++ TFVA G  WLG+PK  R  V
Sbjct:  448 GYDSNSLSASTYDWRIPPSKLEERDNHLTKMILNIEMLRKLNGGRKVVLIAHSMGNRLVQYFLTW--AEKNHGREWIDANIDTFVAVGAPWLGAPKTVRGAV 547          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A7S4UEQ9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UEQ9_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 7.090e-25
Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 1
Query:    1 IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVVAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVV 306
            +GY + NL  A YDWRLP   LE+RDG FT ++ QIE +H    +K VVV HS+G R+  YFL W+  E+ G   WA+TH+ +F+A  P +LG+PK  R+++
Sbjct:  336 VGYDKKNLEGAPYDWRLPFGLLEERDGYFTELRLQIEKLHLVNKEKVVVVTHSMGARVFHYFLNWMDLEDHGN--WAETHIHSFLAVAPPFLGAPKIMRTIL 435          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: L8GQ15_ACACA (C2 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQ15_ACACA)

HSP 1 Score: 101 bits (252), Expect = 8.080e-23
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 1
Query:    1 IGYSR-HNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVVAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVV 306
            +GY+   NL AA YDWRLPP  LE RD  FT +K  I++M ++ G   V+V HS+G R++QYFL WV   +R G +W   ++ TF+A G  WLG+ KA R +V
Sbjct:  570 LGYAYGKNLLAAGYDWRLPPHQLEIRDRYFTNLKQSIQDMSKDYGP-VVLVGHSMGNRVIQYFLNWVMQNDRYGRKWIDDNVHTFMAVGAPWLGASKAIRGLV 671          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A7S4K8A7_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K8A7_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 6.790e-22
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 1
Query:    1 IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVVAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVV 306
            +GY   NL AASYDWRLPP  L+KRD  FTR++  +        +K V++ HS+G R +QYFL+W   E+ G   + + ++  F+A GP +LG+PKA R+V+
Sbjct:  288 VGYDNINLQAASYDWRLPPSKLQKRDFYFTRLRDMVRTARNINEKKVVLMGHSMGCRCIQYFLSWCEGEDPG---FVRENVHAFLAMGPPFLGAPKAMRAVL 386          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A7S4N4Z3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4N4Z3_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 7.520e-22
Identity = 47/103 (45.63%), Postives = 65/103 (63.11%), Query Frame = 1
Query:    1 IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVVAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVVC 309
             GY    L A SYDWRLPP+ L++RD  F  M  +IE M  + G+K V++AHS+G R+VQYF  WV  + R   +W   ++  F+A G  +LGS KA R+V+C
Sbjct:   80 FGYDYCTLDACSYDWRLPPEKLQERDNYFGMMMRKIEAMTEHQGKKVVLLAHSMGNRVVQYFFRWV--QMRRSKDWLDRNIHAFLAMGAPFLGSSKALRTVLC 180          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A7S4CKU0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CKU0_9EUGL)

HSP 1 Score: 93.6 bits (231), Expect = 8.680e-22
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1
Query:    1 IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVV-VAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRS 300
            IGY   NLAAA+YDWR  P  LE+RD  FTRM+A +E+++    +K VV VAHS+G ++V YFL W+     G  EW + H+ +F A    +LGSP+   S
Sbjct:   80 IGYGTANLAAATYDWRQAPKILEQRDQFFTRMQATVESLYEQNSKKAVVFVAHSMGCKIVHYFLHWIKWNPLG-YEWVQEHIHSFFAISGPFLGSPQTLIS 179          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: L8HC75_ACACA (C2 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HC75_ACACA)

HSP 1 Score: 98.6 bits (244), Expect = 9.770e-22
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   19 NLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVVAHSLGTRLVQYFLAWVA-AEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSV 303
            NL AA YDWRLP  HLE+RDG FT++K  I++M        V++ HS+G R++QYFL WV   +   G +W  T++ TFVA G  WLG+ K  R++
Sbjct:  670 NLLAAGYDWRLPLHHLEERDGYFTQLKQDIQDMCVRNNSPVVLMGHSMGNRVIQYFLNWVCHTDPTNGRKWISTNVHTFVAVGAPWLGASKTIRAL 765          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A139AZ47_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AZ47_GONPJ)

HSP 1 Score: 98.2 bits (243), Expect = 1.320e-21
Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 1
Query:    1 IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNC-GQKTVVVAHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVV 306
            +GY+  NLA A YDWR PP + +K D  FT+    IE++ +N  G   V++AHS+G R+V YF  WV+ +E  G++W + H+ +  A GP  +GS K+ RSVV
Sbjct:  239 LGYTEKNLAGAPYDWRYPPQYCQKNDQYFTKTVKTIEDLKKNNDGLPVVILAHSMGNRMVGYFCNWVSNQEGLGVKWLQEHVHSIYAAGPPTMGSSKSVRSVV 341          
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Match: A0A8H7BMN4_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BMN4_9FUNG)

HSP 1 Score: 97.4 bits (241), Expect = 2.420e-21
Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 1
Query:    1 IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVVAHSLGTRLVQYFLAWVAAE--ERGGLEWAKTHLQTFVACGPVWLGSPKAFRSVV 306
            IGY  +N+  ASYDWRLP  +LE RD  FT++K+ IE +  + G+K VVVAHS+G+ L+ YFL W  +     GG +W + H+++FV  G   LG  KAF S++
Sbjct:  250 IGYDNNNMYLASYDWRLPFHNLEVRDKYFTKLKSLIETLKLSEGRKCVVVAHSMGSVLLPYFLKWAESPLGGNGGPDWTENHIESFVNIGGPLLGVAKAFPSLI 353          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93298.21542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4K983_9EUKA3.160e-2749.04Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A2P6NUW2_9EUKA4.050e-2550.00Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S4UEQ9_9EUKA7.090e-2547.06Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
L8GQ15_ACACA8.080e-2347.57C2 domain containing protein n=1 Tax=Acanthamoeba ... [more]
A0A7S4K8A7_9EUKA6.790e-2244.12Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A7S4N4Z3_9EUKA7.520e-2245.63Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A7S4CKU0_9EUGL8.680e-2246.53Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
L8HC75_ACACA9.770e-2246.88C2 domain containing protein n=1 Tax=Acanthamoeba ... [more]
A0A139AZ47_GONPJ1.320e-2143.69Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A8H7BMN4_9FUNG2.420e-2146.15Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93298contigM-pyrifera_M_contig93298:424..750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score96.7
Seed ortholog evalue7.3e-18
Seed eggNOG ortholog5476.C4YFG9
Preferred nameLRO1
KEGG rclassRC00037,RC00041
KEGG koko:K00679
KEGG ReactionR05333
KEGG Pathwayko00561,map00561
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0010876,GO:0010883,GO:0010884,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019432,GO:0019915,GO:0022607,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032879,GO:0033036,GO:0034389,GO:0034641,GO:0042175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046027,GO:0046339,GO:0046460,GO:0046463,GO:0046486,GO:0048471,GO:0048518,GO:0050789,GO:0051179,GO:0051235,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071840,GO:0097038,GO:0098827,GO:0140042,GO:1901564,GO:1901576,GO:1905952,GO:1905954
EggNOG free text desc.Phospholipid diacylglycerol acyltransferase
EggNOG OGs38DE3@33154,3NUWI@4751,3QM8T@4890,3RTP8@4891,479NT@766764,KOG2369@1,KOG2369@2759
EC2.3.1.158
COG Functional cat.I
Best tax levelDebaryomycetaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size327
Cds size327
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816844.962387-CDS-M-pyrifera_M_contig93298:423..7501622816844.962387-CDS-M-pyrifera_M_contig93298:423..750Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93298 424..750 -
1692278212.1320653-CDS-M-pyrifera_M_contig93298:423..7501692278212.1320653-CDS-M-pyrifera_M_contig93298:423..750Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93298 424..750 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93298.21542.1prot_M-pyrifera_M_contig93298.21542.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93298 424..750 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93298.21542.1

>prot_M-pyrifera_M_contig93298.21542.1 ID=prot_M-pyrifera_M_contig93298.21542.1|Name=mRNA_M-pyrifera_M_contig93298.21542.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
IGYSRHNLAAASYDWRLPPDHLEKRDGLFTRMKAQIENMHRNCGQKTVVV
AHSLGTRLVQYFLAWVAAEERGGLEWAKTHLQTFVACGPVWLGSPKAFRS
VVCSFLLS*
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mRNA from alignment at M-pyrifera_M_contig93298:424..750-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93298.21542.1 ID=mRNA_M-pyrifera_M_contig93298.21542.1|Name=mRNA_M-pyrifera_M_contig93298.21542.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig93298:424..750- (Macrocystis pyrifera P11B4 male)
ATTGGATACTCTCGACACAACTTGGCAGCCGCCTCGTATGACTGGAGGCT CCCTCCGGATCACCTCGAAAAGAGGGACGGCCTCTTCACGCGCATGAAGG CACAGATAGAGAACATGCACCGCAACTGTGGCCAGAAGACCGTCGTGGTT GCACACTCTCTTGGTACTCGCCTTGTGCAGTACTTCTTGGCGTGGGTGGC TGCCGAAGAGAGAGGTGGCCTTGAGTGGGCCAAGACCCACCTTCAGACCT TCGTAGCATGTGGCCCTGTGTGGCTGGGGAGCCCAAAAGCATTCCGCTCT GTGGTATGCAGCTTTCTCCTTTCTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93298:424..750-

>mRNA_M-pyrifera_M_contig93298.21542.1 ID=mRNA_M-pyrifera_M_contig93298.21542.1|Name=mRNA_M-pyrifera_M_contig93298.21542.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig93298:424..750- (Macrocystis pyrifera P11B4 male)
ATTGGATACTCTCGACACAACTTGGCAGCCGCCTCGTATGACTGGAGGCT
CCCTCCGGATCACCTCGAAAAGAGGGACGGCCTCTTCACGCGCATGAAGG
CACAGATAGAGAACATGCACCGCAACTGTGGCCAGAAGACCGTCGTGGTT
GCACACTCTCTTGGTACTCGCCTTGTGCAGTACTTCTTGGCGTGGGTGGC
TGCCGAAGAGAGAGGTGGCCTTGAGTGGGCCAAGACCCACCTTCAGACCT
TCGTAGCATGTGGCCCTGTGTGGCTGGGGAGCCCAAAAGCATTCCGCTCT
GTGGTATGCAGCTTTCTCCTTTCTTAAATTGGATACTCTCGACACAACTT
GGCAGCCGCCTCGTATGACTGGAGGCTCCCTCCGGATCACCTCGAAAAGA
GGGACGGCCTCTTCACGCGCATGAAGGCACAGATAGAGAACATGCACCGC
AACTGTGGCCAGAAGACCGTCGTGGTTGCACACTCTCTTGGTACTCGCCT
TGTGCAGTACTTCTTGGCGTGGGTGGCTGCCGAAGAGAGAGGTGGCCTTG
AGTGGGCCAAGACCCACCTTCAGACCTTCGTAGCATGTGGCCCTGTGTGG
CTGGGGAGCCCAAAAGCATTCCGCTCTGTGGTATGCAGCTTTCTCCTTTC
TTAA
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