mRNA_M-pyrifera_M_contig9324.21533.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: A0A6H5KZ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ87_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.290e-47 Identity = 79/92 (85.87%), Postives = 84/92 (91.30%), Query Frame = 1 Query: 1 MGDAAPVSRWAQRKQQREQMYATSSDAIQGVFRKKQAKAKNMTCQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPPGED 276 MGDAAPVSRWAQRKQQRE MYATSSDAIQGVFRKKQ AKNM CQKCLQ+ GHWTYECKGK YK R+SRT+ILENPDLKPKFHLDLPPG++ Sbjct: 1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKAAKNMVCQKCLQV-GHWTYECKGKATYKARVSRTEILENPDLKPKFHLDLPPGKE 91
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: D8LGL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL3_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 2.040e-21 Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 MGDAAPVSRWAQRKQQREQMYATSSDAIQGVFRKKQAKAKNMTCQKCLQI 150 MGDAAPVSRWAQRKQQRE MYATSSDAIQGVFRKKQ +AKNM CQKCLQ+ Sbjct: 1 MGDAAPVSRWAQRKQQREMMYATSSDAIQGVFRKKQKEAKNMVCQKCLQV 50
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: A0A6A4FI13_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FI13_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.720e-14 Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQGVFRKKQAKAKNMT---CQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGDA AP+ +WAQRK+ R MYATS++ ++ + R A A + CQKCL+ GHWTYECK Y R SR++ L+NP L+ F+ D PP Sbjct: 1 MGDAGGDAPLGKWAQRKEARRNMYATSTEQVRVLRRGVGASAASSAAAMCQKCLR-PGHWTYECKNDAVYVQRPSRSQQLKNPKLRQPFNTDKPP 94
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: A0A225VI99_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VI99_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.100e-14 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQGVFRKKQAKAKNMT---CQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGD AP+ +WAQRK+ R MYATS++ ++ R + ++T CQKCL+ GHWTYECK + Y R SR++ L+NP L+ F++D PP Sbjct: 1 MGDVNGDAPLGKWAQRKEARRNMYATSTEQVRVHRRGLGTSSASITAAMCQKCLR-PGHWTYECKNEAVYVQRPSRSQQLKNPKLRQPFNMDKPP 94
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: M4C528_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C528_HYAAE) HSP 1 Score: 76.6 bits (187), Expect = 7.210e-14 Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQGVFRKKQAKAKNMT-----CQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGDA AP+ +WAQRK+ R MYA+S+D ++ R A + + CQKCL+ GHWTYECK + Y R SR++ L+NP L+ +F+ D PP Sbjct: 1 MGDANGEAPLGKWAQRKEARRNMYASSTDQVRVHLRGLGASSSAASSIAAMCQKCLR-PGHWTYECKNEAVYVHRPSRSQQLKNPKLRQRFNTDKPP 96
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: W2G963_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2G963_PHYPR) HSP 1 Score: 76.3 bits (186), Expect = 1.100e-13 Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQ----GVFRKKQAKAKNMTCQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGDA AP+ WAQRK+ R MYATS+D ++ G+ + A M CQKCL+ GHWTYECK + Y R SR++ L NP L+ F+ D PP Sbjct: 1 MGDANGEAPLGIWAQRKEARRNMYATSTDQVRVHRRGLGSSSSSSAAAM-CQKCLR-PGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 94
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: A0A2P4Y342_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y342_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.440e-13 Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQGVFRK----KQAKAKNMTCQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGD AP+ +WAQRK+ R MYATS++ ++ V R+ A + CQKCL+ GHWTYECK + Y R SR++ L+NP L+ F+ D PP Sbjct: 1 MGDVNGDAPLGKWAQRKEARRNMYATSTEQVR-VHRRGLGASSASSAAAMCQKCLR-PGHWTYECKNEAVYVQRPSRSQQLKNPKLRQPFNKDKPP 94
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: G4YMX9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YMX9_PHYSP) HSP 1 Score: 77.8 bits (190), Expect = 2.920e-13 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQ----GVFRKKQAKAKNMTCQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGDA AP+ +WAQRK+ R MYATS++ ++ GV + A M CQKCL+ GHWTYECK + Y R SR++ L+NP L+ F+ D PP Sbjct: 481 MGDAGGDAPLGKWAQRKEARRNMYATSTEKVRVHRRGVGASSASSAAAM-CQKCLR-PGHWTYECKNEAVYVQRPSRSQQLKNPKLRQPFNKDKPP 574
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: A0A329S1Q1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1Q1_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.940e-13 Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQGVFRK----KQAKAKNMTCQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGDA AP+ WAQRK+ R MYATS++ ++ V R+ A + CQKCL+ GHWTYECK + Y R SR++ L NP L+ F+ D PP Sbjct: 1 MGDANGDAPLGLWAQRKEARRNMYATSTEQVR-VHRRGLGASSASSAAAMCQKCLR-PGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 94
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Match: A0A0W8DKB9_PHYNI (Kidney mitochondrial carrier protein 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DKB9_PHYNI) HSP 1 Score: 76.3 bits (186), Expect = 2.970e-13 Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 1 MGDA---APVSRWAQRKQQREQMYATSSDAIQ----GVFRKKQAKAKNMTCQKCLQIEGHWTYECKGKQAYKMRMSRTKILENPDLKPKFHLDLPP 267 MGDA AP+ WAQRK+ R MYATS+D ++ G+ + A M CQKCL+ GHWTYECK + Y R SR++ L NP L+ F+ D PP Sbjct: 67 MGDANGEAPLGIWAQRKEARRNMYATSTDQVRVHRRGLGSSSSSSAAAM-CQKCLR-PGHWTYECKNEAVYVQRPSRSQQLRNPKLRQPFNKDKPP 160 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9324.21533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9324.21533.1 >prot_M-pyrifera_M_contig9324.21533.1 ID=prot_M-pyrifera_M_contig9324.21533.1|Name=mRNA_M-pyrifera_M_contig9324.21533.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp MGDAAPVSRWAQRKQQREQMYATSSDAIQGVFRKKQAKAKNMTCQKCLQIback to top mRNA from alignment at M-pyrifera_M_contig9324:6581..9917+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9324.21533.1 ID=mRNA_M-pyrifera_M_contig9324.21533.1|Name=mRNA_M-pyrifera_M_contig9324.21533.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3337bp|location=Sequence derived from alignment at M-pyrifera_M_contig9324:6581..9917+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9324:6581..9917+ >mRNA_M-pyrifera_M_contig9324.21533.1 ID=mRNA_M-pyrifera_M_contig9324.21533.1|Name=mRNA_M-pyrifera_M_contig9324.21533.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig9324:6581..9917+ (Macrocystis pyrifera P11B4 male)back to top |