mRNA_M-pyrifera_M_contig9324.21532.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: D8LGL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL4_ECTSI) HSP 1 Score: 271 bits (694), Expect = 3.960e-87 Identity = 175/287 (60.98%), Postives = 204/287 (71.08%), Query Frame = 1 Query: 1 SLLLLGAGXXXXXXXXXXRRRTDRADEYSGGERKKRKGRGSGGRFXXXXXXXXXXXXXXKGTHQSESAPPKDQE-----GELWGGESRLSSLEDKVEAEFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDTVVQEVSLDNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPYATHPSVPREGGDGGDAGGIYKAYSG-FGPPPAEEDEVIDVDTMRAFFDADD 843 S ++L A RRRTDR DEYS +RKK KGRG XXXXXXXXXXXXXX S ++ P E G++WGG SR+SSL+D+ AEFSRKIDCSELSRKPK++++EATE E AALA RF+ E ITGLKAD RV+R +++RKI I+GRV G+V Q CA TLE F + + REF T +QEVSLD+V+STLWALEEDTETD+EIMEGDPLDLGEVAAQ LALCIDPYA HP D G G G FG P ED V+DVDTM+AFFDADD Sbjct: 35 SSVMLSARGGGRSGGDSSRRRTDRPDEYSR-DRKKGKGRGXXXXXXXXXXXXXXXXXXXXXXVGSGTSAPSPFETAGDGGDIWGGGSRMSSLDDRAPAEFSRKIDCSELSRKPKYFSVEATENECAALAQRFTCEAITGLKADFRVVRGSDARKIKIRGRVKGNVTQNCAATLESFVLPVEREFSTAIQEVSLDSVQSTLWALEEDTETDDEIMEGDPLDLGEVAAQGLALCIDPYAKHPDFVASS-DAGSGNGEGATVPGRFGMPAEGEDVVLDVDTMKAFFDADD 319
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A6N7F7Z8_9PROT (DUF177 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F7Z8_9PROT) HSP 1 Score: 83.6 bits (205), Expect = 8.920e-16 Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 280 EFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDTVVQEVSLDNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPYATHPSVPRE 720 EFS + SEL + Y +EA +E AALASRF + I A++ + R + +KGR+ DV Q C TLEP ++ D ++ E A E+D D E++EGD LD+GE+AA+ +AL +DPY P E Sbjct: 12 EFSLVVHPSELPAGGRRYVLEAGPKERAALASRFGLVSIEAFTAEMELERVPGGDFLRLKGRLRADVVQSCVVTLEPVRAAVDETVD-ILYAADPGGAE----AFEDDMTRDVELLEGDSLDIGEIAAEEMALMLDPYPRAPGASLE 153
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A2N3PYS1_9PROT (Uncharacterized protein n=1 Tax=Telmatospirillum siberiense TaxID=382514 RepID=A0A2N3PYS1_9PROT) HSP 1 Score: 81.6 bits (200), Expect = 3.100e-15 Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 1 Query: 271 VEAEFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDTV-VQEVSLDNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPYATHPSVPREGGD 729 + EFSR + + Y IEA E AALA R+ + + A LR+ R + R + +KGR DV Q C +LEP + +F V ++ ++VE + EED E +EG +DLGE AA+ LAL +DP+ P +GGD Sbjct: 2 IAIEFSRPVQVDRFGHDERRYDIEANGEERAALAERYGILSVDSFTAHLRLRRISGERLL-LKGRFSADVVQSCVVSLEPVSAHLEEDFSLVYAADLDEEDVEVDIGLTEEDPP---EPIEGGVIDLGEAAAEHLALALDPFPRAPGASFQGGD 151
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A7S3XQZ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQZ0_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 8.560e-14 Identity = 60/164 (36.59%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 235 GGESRLSSLEDKVEAEFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAAN-SRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDTVVQEVSLDNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPYATHPSVPREG 723 G + LS +E EFSR I EL RK + ATE E A LA RF + I+ A + V R + + I G + DV Q C T F V++ +F++VV++++ + + DEE+ EG PLDLGE+AAQ L L ID HP V G Sbjct: 49 GAKESLSFVEPIPGNEFSRAIQLGELGRKHFSCELTATEDECALLAERFDLPSISSFTASVSVRRTDGVPQLVTIVGSLAADVTQRCRTTGRDFPVAVDEDFESVVRDLAAAARDGEELGPLTNELIDEEVEEGAPLDLGELAAQYLCLAIDFNRPHPEVAGPG 212
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: W7DMX0_9PROT (Uncharacterized protein n=2 Tax=Commensalibacter sp. MX01 TaxID=1208583 RepID=W7DMX0_9PROT) HSP 1 Score: 74.3 bits (181), Expect = 1.830e-12 Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 280 EFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDTVVQEVSLDNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPY 693 EFSRK+ S++ +KP IEA E E ALA RFS+ + L + L+ + R++ KG + + Q C +LE F V+I F+ + + D+++S L EE + D EG+ +DLGEV A+ LAL +DPY Sbjct: 6 EFSRKLQISQIQKKPLMIKIEADEEEKKALAERFSIPKLHSLFC-IYQLKYYHGRQVRAKGEIKALITQNCVISLEDFFVTIHESFE--LHFIPNDDLKSEL---EEIDDPDIIPYEGEVIDLGEVTAEQLALFLDPY 137
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A0E9MQJ7_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas changbaiensis NBRC 104936 TaxID=1219043 RepID=A0A0E9MQJ7_9SPHN) HSP 1 Score: 73.9 bits (180), Expect = 2.240e-12 Identity = 56/158 (35.44%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 280 EFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDT-VVQEVSLDNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPY---ATHPSVPREGGDGGDA 741 EFSR +D +S P+ I A E E LA RF ++ I L AD+R++R A ++ G V DV Q C T EP + F+ V + + L ED +T +EG +DLGE+AA+ LAL +DP+ A + +E G GG+A Sbjct: 4 EFSRTVDADTISEAPRQVEISADEAERRRLAGRFGLKAIDSLSADVRLVRRAGI--LHADGHVRADVVQSCVVTDEPLPAHVDAPFNVRFVPDAYAHAADEELELSAEDCDTLP--LEGGRIDLGELAAETLALALDPFPRSARADAALQEAGMGGEA 157
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A2E7UY64_9RICK (Uncharacterized protein n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E7UY64_9RICK) HSP 1 Score: 72.4 bits (176), Expect = 8.680e-12 Identity = 49/140 (35.00%), Postives = 76/140 (54.29%), Query Frame = 1 Query: 280 EFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDTVVQEVSLDNVE--STLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPY 693 EFSR E+ R F + A E ESAALA RF + ITGLKA+L + I + G + V Q C +LEP ++ + + V+E +N E ++ +++E ++++ G+ +DLGE+ AQ L L +DPY Sbjct: 8 EFSRIQSIEEIGRDGIFLKLSADEYESAALAERFDIMSITGLKAELHLRSERGGDIIAVSGMLEALVEQECVVSLEP----VSSKISSKVEERFANNTEIADDIFVSMDESEAIDDLLVGNEVDLGEMLAQCLYLALDPY 143
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A1Y2KZH1_9PROT (Uncharacterized protein n=1 Tax=Thalassospira mesophila TaxID=1293891 RepID=A0A1Y2KZH1_9PROT) HSP 1 Score: 72.4 bits (176), Expect = 1.140e-11 Identity = 59/164 (35.98%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 259 LEDKVEAEFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDTVVQ-EVSLDNVESTLWALEEDTETDEEIM----EGDPL-----DLGEVAAQVLALCIDPYATHPSVPRE 720 + DK+ EFS + +EL K + IEA+ E AALA RF + I + A L L+ A + ++ ++G + ++ Q C TLEP + E + + VS +N+ ST LE TE +E+M + +PL DLGEVAAQ LA+ +DPY V E Sbjct: 1 MSDKLTPEFSHIVKVAELVAKKTTFEIEASAAERAALADRFDLAGIEKMAAKL-TLQLAGNGEVTVRGTLHAEITQRCVVTLEPVPEIVDDEIEVLYSPHVSEENMPSTADDLEGLTE--DELMALLDQPEPLTDGIIDLGEVAAQFLAISMDPYPRKEGVDIE 161
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A6I4IXM6_9SPHN (DUF177 domain-containing protein n=3 Tax=Sphingomonas TaxID=13687 RepID=A0A6I4IXM6_9SPHN) HSP 1 Score: 71.6 bits (174), Expect = 1.560e-11 Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 280 EFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSIAREFDT-VVQEVSLDNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPY 693 EFSR +D +S P+ IEA E E LA RF ++ I L AD+R+ R A ++ +GRV DV Q C T EP + F V + + E + ED +T +E +DLGE+AA+ LAL +DP+ Sbjct: 4 EFSRPVDSDTISESPRAVQIEADEAERRRLAGRFGLKAIERLSADVRLARRAGV--VHAEGRVDADVVQSCVVTDEPLPAHVEAPFHVRFVPDAYSASPEEEMELSAEDCDTLP--LEAGRIDLGELAAETLALALDPF 138
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Match: A0A5C6UHQ4_9SPHN (DUF177 domain-containing protein n=1 Tax=Sphingomonas ginsenosidivorax TaxID=862135 RepID=A0A5C6UHQ4_9SPHN) HSP 1 Score: 70.1 bits (170), Expect = 5.330e-11 Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 280 EFSRKIDCSELSRKPKFYTIEATERESAALASRFSVEVITGLKADLRVLRAANSRKINIKGRVMGDVRQFCAKTLEPFDVSI--------AREFDTVVQEVSL-DNVESTLWALEEDTETDEEIMEGDPLDLGEVAAQVLALCIDPYATHPS 708 EFSR+ + + + TI A E AA+A RF + I L+A L V R A S + +G+V GDV Q C+ T EP V+I EF+T E+ L ++V T+ ++EG +DLGE AA+ LAL +DP+ P+ Sbjct: 4 EFSRRERLDTIGERGRTVTIAADADERAAVARRFGLVSIARLEATLAVRREAGS--VFAQGQVSGDVVQACSVTGEPLPVTIDEPVSLRFVEEFETEADEIELSEDVLDTM------------LIEGGAIDLGEAAAETLALALDPFPRGPN 141 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9324.21532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9324.21532.1 >prot_M-pyrifera_M_contig9324.21532.1 ID=prot_M-pyrifera_M_contig9324.21532.1|Name=mRNA_M-pyrifera_M_contig9324.21532.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp MGDVRQFCAKTLEPFDVSIAREFDTVVQEVSLDNVESTLWALEEDTETDEback to top mRNA from alignment at M-pyrifera_M_contig9324:1555..5796- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9324.21532.1 ID=mRNA_M-pyrifera_M_contig9324.21532.1|Name=mRNA_M-pyrifera_M_contig9324.21532.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4242bp|location=Sequence derived from alignment at M-pyrifera_M_contig9324:1555..5796- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9324:1555..5796- >mRNA_M-pyrifera_M_contig9324.21532.1 ID=mRNA_M-pyrifera_M_contig9324.21532.1|Name=mRNA_M-pyrifera_M_contig9324.21532.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig9324:1555..5796- (Macrocystis pyrifera P11B4 male)back to top |