mRNA_M-pyrifera_M_contig93227.21529.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93227.21529.1
Unique NamemRNA_M-pyrifera_M_contig93227.21529.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: A0A2P6MVV9_9EUKA (DNA-dependent protein kinase catalytic subunit n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVV9_9EUKA)

HSP 1 Score: 154 bits (388), Expect = 2.320e-39
Identity = 89/217 (41.01%), Postives = 132/217 (60.83%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFE-VYEAIHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKIGSQPL 651
            H S+F+QYL +D++KMF RL  LCKH NKK+      A + F  QV+ E+ S  R+  S+  TF+FFI+ F++ML+S + S + E+S AIRG G  A P+  +MG +ELKK+  KL+    +F++G  E + E   HL SF++AFA+I LQ     + +L H E +   VF  +P +    G  +    A+SRL ++L S G +LQSLL ++  Q L
Sbjct:  318 HGSLFRQYLTQDAEKMFQRLFALCKHQNKKLRSKAFAAYEVFIIQVSFEITSGSRNSSSDEATFRFFIRSFYEMLESSS-SRIYEVSTAIRGLGYMADPICQFMGQNELKKMLSKLVTMCQRFYSGGNESMEEQSAHLASFISAFASIILQ-----ETYLTHFEAILGTVFRIYPDLYFRDGYCL----AISRLIIALCSKGTSLQSLLDRVIYQAL 524          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: F4QCS0_CAVFA (DNA-dependent protein kinase subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QCS0_CAVFA)

HSP 1 Score: 142 bits (359), Expect = 1.500e-35
Identity = 84/215 (39.07%), Postives = 128/215 (59.53%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFE-VYEAIHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKIGSQ 645
            HA +FKQYL E S+KMF RL   C H+NK         +D F  Q+A E+ S +RS ES+  TFKFFI+KF+ + ++   S+  EISIAIRG   FA P+  ++G  ELK +   L ++S+K      E + E + HL SF+NAF+NI  ++  ++  +L+ LE++    F+ +P   L    +  +  A++RLF SL+  G  L++LL++I  Q
Sbjct:  302 HAPLFKQYLTEQSEKMFTRLEFWCNHNNKLNRDIAFNCIDTFLAQIAKEMTSGQRSIESDQTTFKFFIRKFYSIFEN-TNSSTYEISIAIRGCSRFALPVKQFIGEWELKSLLGSLFKFSEKLMIVKLENIEEIVMHLSSFINAFSNILFEINDIEFWYLDPLEQIVGTFFIIYPY--LFEKQRDRYYSAINRLFASLYFKGDFLKTLLTRIVRQ 513          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: UPI000644E81C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E81C)

HSP 1 Score: 142 bits (357), Expect = 3.310e-35
Identity = 85/220 (38.64%), Postives = 129/220 (58.64%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFE-VYEAIHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNR---ALSRLFVSLFSAGAALQSLLSKIGSQPL 651
            H  + KQYL E S++++ RL   CKH NKK        +D+F  QVA EL S  RS E++  TFK+FI+KF+ + ++   S   +ISIAIRG G FA P+  ++G  ELK +   L ++S+K      E + E + HL SF+NAF+NI  +L  ++  +L+HLE++ S  F+ FP +        +H+R   A++RL  SL+     L++LL +I  Q L
Sbjct:  321 HTPLLKQYLTEQSEQVYTRLEQWCKHANKKTRDIAFQCIDSFLSQVAQELTSGNRSVENDQITFKYFIRKFYSIFEN-TNSTPHDISIAIRGCGRFALPVKTFIGEWELKSLLGSLFKFSEKLMIIKLENIEEIVMHLSSFINAFSNILFELNDIEFWYLDHLEQVLSTYFIIFPYL-----FAAQHDRYFSAVNRLLFSLYHRQEFLKTLLGRIVRQGL 534          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: UPI000BA831AE (DNA-dependent protein kinase catalytic subunit-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA831AE)

HSP 1 Score: 102 bits (255), Expect = 1.420e-21
Identity = 63/181 (34.81%), Postives = 105/181 (58.01%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTER---SEESNIHTFKFFIKKFFD-MLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGD-FEVYEAIHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQI 531
            HA  F Q+L +D + M+    + C   NK+    G  AL++F +++   L++  R   SE S++  FKFFI  F   M D+++ S  R++S+A+RG+G FAGP  +Y+G +++K +   +LQ S+ F+  +   + E I  LPS+L A A+I  QL  V + HLE + +L      ++PQ+
Sbjct:  277 HAPQFNQFLFDDYENMYKNFVHWCHQSNKESRAIGYAALESFLKEITDILIAKAREGKSEGSSV--FKFFITAFQQCMRDNKSDS--RDLSVAVRGYGLFAGPCKLYLGEEDVKFMQNDMLQRSEHFYLSEEILLEEKIQTLPSYLEALASIISQLNEVSETHLERVVKLVVMQIEHYPQL 453          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: A0A0D2W1H9_CAPO3 (DNA-dependent protein kinase catalytic subunit n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W1H9_CAPO3)

HSP 1 Score: 99.0 bits (245), Expect = 3.080e-20
Identity = 61/214 (28.50%), Postives = 121/214 (56.54%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAG-DFEVYE--AIHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKI 636
            HA  FK++LA+D   +   ++  C+H N KV      A +A  + +A  +V  + +  ++   F+FF+  F D+++++  S  R++++A+RG+G FA P  +++   ++K +F +++Q S++ +     +V +  ++  +PS++NA ANI +QL  + D  L  L RL   +F  FP+++  +        A+  LF SL+  GA L++ L+ +
Sbjct:  274 HAMQFKEFLADDYTVVHNHVSAWCQHKNPKVRTASFAAFEAVLQAIAAVIVRRDGTGANDGVMFQFFVTAFRDIMNAK-DSEPRDLALAVRGYGYFAAPCRIFLNQADVKFMFDEVVQRSEQLYTNVTLQVVDEASLSLVPSYINALANIVMQLDELGDPQLRALARLAIFLFEVFPRVHYKQRDPCYF--AIMLLFSSLYPKGALLRTFLADV 484          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: UPI00189C7278 (DNA-dependent protein kinase catalytic subunit n=1 Tax=Choloepus didactylus TaxID=27675 RepID=UPI00189C7278)

HSP 1 Score: 96.7 bits (239), Expect = 1.930e-19
Identity = 65/217 (29.95%), Postives = 120/217 (55.30%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFEVYEA-IHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKIGSQPL 651
            HAS F  YL ++   +F  L+  C H N  V    ++AL++F +QV++ +       +S +   ++F+++F++++ +   SN +E+SIAIRG+G FAGP    +  +++  ++++L+Q   + F    +  E  ++ +PSFL + A++ L L  V +V+   LE L       FPQ   S  +Q    RA+++LF++L   G  L + +S +  Q L
Sbjct:  278 HASQFSTYLLDNYISLFEVLSKWCSHTNVDVKKAANSALESFLKQVSVMVAKDAEMHKSKL---QYFMEQFYEIIRNM-DSNNKELSIAIRGYGLFAGPCKA-INAEDVDLMYIELIQRCKQMFLMQTDTIEDHVYQMPSFLQSIASVLLYLDTVPEVYTPVLEHLMVVQMDSFPQY--SPKMQSTCCRAMAKLFLALAEKGPVLCNCISAVLHQGL 487          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: G3T7P6_LOXAF (Uncharacterized protein n=1 Tax=Loxodonta africana TaxID=9785 RepID=G3T7P6_LOXAF)

HSP 1 Score: 91.3 bits (225), Expect = 5.080e-19
Identity = 65/217 (29.95%), Postives = 116/217 (53.46%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFEVYEA-IHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKIGSQPL 651
            HAS F   L ++   +F  L+  C H N +V      AL+AF +QV+  +    R  E + +T ++F+K+F++++ +   SN +E+SIAIRG+G FAGP    +  + +  ++++LLQ   + F    +  +  ++ +PSFL +  ++ L L  V +V+   LE L       FPQ   S  +Q+   RA+ ++F++L   G  L + +  +  Q L
Sbjct:   12 HASQFSTCLLDNYASLFDVLSKWCAHTNVEVKKAAHVALEAFLKQVSFMVA---RDAERHKNTLEYFMKQFYEIIRNVDSSN-KELSIAIRGYGLFAGPCKA-ISPENVDWMYVELLQRCRQMFLTQTDTPDDHVYQMPSFLQSIGSVLLYLDTVPEVYTPVLEHLMVVHIDSFPQY--SPKMQVVCCRAIVKVFLALADKGPVLWNCIGTVVHQGL 221          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: A0A8C2QVP1_CAPHI (DNA-dependent protein kinase catalytic subunit n=2 Tax=Capra hircus TaxID=9925 RepID=A0A8C2QVP1_CAPHI)

HSP 1 Score: 94.7 bits (234), Expect = 8.900e-19
Identity = 69/217 (31.80%), Postives = 120/217 (55.30%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFEVYEA-IHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKIGSQPL 651
            HAS F   L ++   +F  L+  C H N ++     +AL++F +QV+L LV+ +   E++    +FF+++F+ ++ +   +N +++SIAIRG+G FAGP    +   ++  +F++L+Q   + F  + +  E  ++ LPSFL + A++ L L  V +VH   LE L       FPQ   S  +Q+   RA+ RLF++L   G  L S +  +  Q L
Sbjct:  283 HASQFSTCLLDNYASLFEVLSKWCSHMNVELRKAAHSALESFLKQVSL-LVAHDA--EAHRGPLRFFMEQFYSIIRN-VDANSKDLSIAIRGYGLFAGPCKA-VNARDVDLMFVELIQRCRQLFLTEADAAEDHVYQLPSFLQSVASVLLHLDAVPEVHSPVLEHLVVLQMDSFPQY--SPKMQLVCCRAIVRLFLALAEKGPILWSCIGAVVHQSL 492          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: A0A452EJK4_CAPHI (DNA-dependent protein kinase catalytic subunit n=1 Tax=Capra hircus TaxID=9925 RepID=A0A452EJK4_CAPHI)

HSP 1 Score: 94.7 bits (234), Expect = 8.900e-19
Identity = 69/217 (31.80%), Postives = 120/217 (55.30%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFEVYEA-IHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKIGSQPL 651
            HAS F   L ++   +F  L+  C H N ++     +AL++F +QV+L LV+ +   E++    +FF+++F+ ++ +   +N +++SIAIRG+G FAGP    +   ++  +F++L+Q   + F  + +  E  ++ LPSFL + A++ L L  V +VH   LE L       FPQ   S  +Q+   RA+ RLF++L   G  L S +  +  Q L
Sbjct:  278 HASQFSTCLLDNYASLFEVLSKWCSHMNVELRKAAHSALESFLKQVSL-LVAHDA--EAHRGPLRFFMEQFYSIIRN-VDANSKDLSIAIRGYGLFAGPCKA-VNARDVDLMFVELIQRCRQLFLTEADAAEDHVYQLPSFLQSVASVLLHLDAVPEVHSPVLEHLVVLQMDSFPQY--SPKMQLVCCRAIVRLFLALAEKGPILWSCIGAVVHQSL 487          
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Match: W5PQQ8_SHEEP (DNA-dependent protein kinase catalytic subunit n=1 Tax=Ovis aries TaxID=9940 RepID=W5PQQ8_SHEEP)

HSP 1 Score: 94.4 bits (233), Expect = 1.210e-18
Identity = 69/217 (31.80%), Postives = 120/217 (55.30%), Query Frame = 1
Query:    4 HASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALELVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGPMLMYMGVDELKKVFMKLLQYSDKFFAGDFEVYEA-IHHLPSFLNAFANISLQLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFSAGAALQSLLSKIGSQPL 651
            HAS F   L ++   +F  L+  C H N ++     +AL++F +QV+L LV+ +   E++    +FF+++F+ ++ +   +N +++SIAIRG+G FAGP    +   ++  +F++L+Q   + F  + +  E  ++ LPSFL + A++ L L  V +VH   LE L       FPQ   S  +Q+   RA+ RLF++L   G  L S +  +  Q L
Sbjct:  278 HASQFSTCLLDNYASLFEVLSKWCSHMNVELRKAAHSALESFLKQVSL-LVAHDA--EAHRGPLRFFMEQFYSIIRN-VDANSKDLSIAIRGYGLFAGPCKA-VNARDVDLMFVELIQRCRQLFLMEADAAEDHVYQLPSFLQSVASVLLHLDAVPEVHSPVLEHLVVLQMDSFPQY--SPKMQLVCCRAIVRLFLALAEKGPILWSCIGAVVHQSL 487          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93227.21529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6MVV9_9EUKA2.320e-3941.01DNA-dependent protein kinase catalytic subunit n=1... [more]
F4QCS0_CAVFA1.500e-3539.07DNA-dependent protein kinase subunit n=1 Tax=Caven... [more]
UPI000644E81C3.310e-3538.64hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI000BA831AE1.420e-2134.81DNA-dependent protein kinase catalytic subunit-lik... [more]
A0A0D2W1H9_CAPO33.080e-2028.50DNA-dependent protein kinase catalytic subunit n=2... [more]
UPI00189C72781.930e-1929.95DNA-dependent protein kinase catalytic subunit n=1... [more]
G3T7P6_LOXAF5.080e-1929.95Uncharacterized protein n=1 Tax=Loxodonta africana... [more]
A0A8C2QVP1_CAPHI8.900e-1931.80DNA-dependent protein kinase catalytic subunit n=2... [more]
A0A452EJK4_CAPHI8.900e-1931.80DNA-dependent protein kinase catalytic subunit n=1... [more]
W5PQQ8_SHEEP1.210e-1831.80DNA-dependent protein kinase catalytic subunit n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93227contigM-pyrifera_M_contig93227:45..755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score139.0
Seed ortholog evalue2.5e-30
Seed eggNOG ortholog44689.DDB0229336
Preferred namePRKDC
KEGG koko:K06642
KEGG Pathwayko03450,ko04110,map03450,map04110
KEGG ModuleM00297
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0001756,GO:0001775,GO:0001817,GO:0001819,GO:0001932,GO:0001933,GO:0002200,GO:0002218,GO:0002244,GO:0002253,GO:0002320,GO:0002326,GO:0002328,GO:0002360,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002521,GO:0002562,GO:0002568,GO:0002637,GO:0002638,GO:0002681,GO:0002682,GO:0002683,GO:0002684,GO:0002697,GO:0002698,GO:0002700,GO:0002701,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004672,GO:0004674,GO:0004677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0005737,GO:0005829,GO:0005958,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006975,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008284,GO:0008630,GO:0009314,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009952,GO:0009987,GO:0010033,GO:0010212,GO:0010243,GO:0010332,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010941,GO:0010942,GO:0010948,GO:0012501,GO:0016043,GO:0016233,GO:0016301,GO:0016310,GO:0016444,GO:0016445,GO:0016447,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022402,GO:0022414,GO:0023052,GO:0030097,GO:0030098,GO:0030154,GO:0030183,GO:0030217,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031349,GO:0031399,GO:0031400,GO:0031570,GO:0031571,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032269,GO:0032446,GO:0032479,GO:0032481,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0032993,GO:0033077,GO:0033151,GO:0033152,GO:0033153,GO:0033554,GO:0034641,GO:0035234,GO:0035282,GO:0035556,GO:0036211,GO:0040008,GO:0042110,GO:0042113,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042592,GO:0042752,GO:0042770,GO:0042981,GO:0043009,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043434,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045088,GO:0045089,GO:0045165,GO:0045321,GO:0045786,GO:0045893,GO:0045927,GO:0045930,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0046649,GO:0048145,GO:0048146,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048536,GO:0048538,GO:0048583,GO:0048584,GO:0048585,GO:0048638,GO:0048639,GO:0048646,GO:0048660,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060322,GO:0060429,GO:0060548,GO:0061053,GO:0065007,GO:0065008,GO:0070013,GO:0070419,GO:0070647,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072718,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090342,GO:0090344,GO:0097159,GO:0097190,GO:0097193,GO:0097327,GO:0097681,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903508,GO:1990391,GO:2000045,GO:2000112,GO:2000134,GO:2000772,GO:2000773,GO:2001141,GO:2001228,GO:2001229
EggNOG free text desc.NUC194
EggNOG OGs3XAJB@554915,COG5032@1,KOG0891@2759
EC2.7.11.1
COG Functional cat.L
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03032,ko03400
Exons2
Model size651
Cds size651
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816844.3431504-CDS-M-pyrifera_M_contig93227:44..2421622816844.3431504-CDS-M-pyrifera_M_contig93227:44..242Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93227 45..242 +
1692278211.7998812-CDS-M-pyrifera_M_contig93227:44..2421692278211.7998812-CDS-M-pyrifera_M_contig93227:44..242Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93227 45..242 +
1622816844.3545265-CDS-M-pyrifera_M_contig93227:302..7551622816844.3545265-CDS-M-pyrifera_M_contig93227:302..755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93227 303..755 +
1692278211.8165526-CDS-M-pyrifera_M_contig93227:302..7551692278211.8165526-CDS-M-pyrifera_M_contig93227:302..755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93227 303..755 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93227.21529.1prot_M-pyrifera_M_contig93227.21529.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93227 45..755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93227.21529.1

>prot_M-pyrifera_M_contig93227.21529.1 ID=prot_M-pyrifera_M_contig93227.21529.1|Name=mRNA_M-pyrifera_M_contig93227.21529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
EHASVFKQYLAEDSDKMFIRLANLCKHHNKKVTYPGSTALDAFFRQVALE
LVSTERSEESNIHTFKFFIKKFFDMLDSQAGSNMREISIAIRGFGSFAGP
MLMYMGVDELKKVFMKLLQYSDKFFAGDFEVYEAIHHLPSFLNAFANISL
QLGHVDDVHLEHLERLTSAVFVYFPQINLSRGLQIEHNRALSRLFVSLFS
AGAALQSLLSKIGSQPL
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mRNA from alignment at M-pyrifera_M_contig93227:45..755+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93227.21529.1 ID=mRNA_M-pyrifera_M_contig93227.21529.1|Name=mRNA_M-pyrifera_M_contig93227.21529.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig93227:45..755+ (Macrocystis pyrifera P11B4 male)
GAGCATGCCAGCGTATTCAAGCAATACCTGGCCGAGGACAGCGACAAGAT GTTCATCCGCCTTGCCAATCTCTGCAAGCACCACAACAAGAAGGTGACGT ATCCTGGCTCCACGGCTCTCGACGCATTCTTTCGTCAAGTAGCGCTCGAG CTGGTCTCCACCGAGCGCTCCGAGGAGAGCAACATTCACACCTTCAAAGT ACGGCCTGCTTGCTATCTTCCCCATGCCCACTATCTAGTTGCTGACTATC TGTCGCAGTTCTTCATCAAGAAGTTCTTCGACATGCTCGACTCGCAGGCA GGCTCGAACATGCGTGAGATCAGTATCGCTATCCGTGGCTTTGGAAGCTT CGCTGGCCCGATGCTGATGTACATGGGCGTGGATGAGCTGAAGAAGGTCT TCATGAAGCTCCTCCAGTACTCAGACAAGTTCTTTGCTGGAGATTTTGAG GTGTACGAGGCCATCCATCACCTCCCGAGTTTCCTCAATGCCTTTGCAAA CATCAGTCTCCAGCTCGGGCACGTGGACGATGTCCACCTTGAACACCTTG AGCGTCTCACCAGCGCTGTCTTTGTGTATTTCCCGCAGATCAACCTCTCT CGTGGCCTTCAAATCGAGCACAACCGGGCTTTGTCAAGGCTGTTTGTCTC ACTCTTCTCTGCAGGAGCTGCCCTGCAGTCTCTATTGTCGAAGATAGGTT CGCAACCCCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93227:45..755+

>mRNA_M-pyrifera_M_contig93227.21529.1 ID=mRNA_M-pyrifera_M_contig93227.21529.1|Name=mRNA_M-pyrifera_M_contig93227.21529.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig93227:45..755+ (Macrocystis pyrifera P11B4 male)
GAGCATGCCAGCGTATTCAAGCAATACCTGGCCGAGGACAGCGACAAGAT
GTTCATCCGCCTTGCCAATCTCTGCAAGCACCACAACAAGAAGGTGACGT
ATCCTGGCTCCACGGCTCTCGACGCATTCTTTCGTCAAGTAGCGCTCGAG
CTGGTCTCCACCGAGCGCTCCGAGGAGAGCAACATTCACACCTTCAAAGA
GCATGCCAGCGTATTCAAGCAATACCTGGCCGAGGACAGCGACAAGATGT
TCATCCGCCTTGCCAATCTCTGCAAGCACCACAACAAGAAGGTGACGTAT
CCTGGCTCCACGGCTCTCGACGCATTCTTTCGTCAAGTAGCGCTCGAGCT
GGTCTCCACCGAGCGCTCCGAGGAGAGCAACATTCACACCTTCAAATTCT
TCATCAAGAAGTTCTTCGACATGCTCGACTCGCAGGCAGGCTCGAACATG
CGTGAGATCAGTATCGCTATCCGTGGCTTTGGAAGCTTCGCTGGCCCGAT
GCTGATGTACATGGGCGTGGATGAGCTGAAGAAGGTCTTCATGAAGCTCC
TCCAGTACTCAGACAAGTTCTTTGCTGGAGATTTTGAGGTGTACGAGGCC
ATCCATCACCTCCCGAGTTTCCTCAATGCCTTTGCAAACATCAGTCTCCA
GCTCGGGCACGTGGACGATGTCCACCTTGAACACCTTGAGCGTCTCACCA
GCGCTGTCTTTGTGTATTTCCCGCAGATCAACCTCTCTCGTGGCCTTCAA
ATCGAGCACAACCGGGCTTTGTCAAGGCTGTTTGTCTCACTCTTCTCTGC
AGGAGCTGCCCTGCAGTCTCTATTGTCGAAGATAGGTTCGCAACCCCTCT
TCTTCATCAAGAAGTTCTTCGACATGCTCGACTCGCAGGCAGGCTCGAAC
ATGCGTGAGATCAGTATCGCTATCCGTGGCTTTGGAAGCTTCGCTGGCCC
GATGCTGATGTACATGGGCGTGGATGAGCTGAAGAAGGTCTTCATGAAGC
TCCTCCAGTACTCAGACAAGTTCTTTGCTGGAGATTTTGAGGTGTACGAG
GCCATCCATCACCTCCCGAGTTTCCTCAATGCCTTTGCAAACATCAGTCT
CCAGCTCGGGCACGTGGACGATGTCCACCTTGAACACCTTGAGCGTCTCA
CCAGCGCTGTCTTTGTGTATTTCCCGCAGATCAACCTCTCTCGTGGCCTT
CAAATCGAGCACAACCGGGCTTTGTCAAGGCTGTTTGTCTCACTCTTCTC
TGCAGGAGCTGCCCTGCAGTCTCTATTGTCGAAGATAGGTTCGCAACCCC
TC
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