mRNA_M-pyrifera_M_contig93224.21528.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93224.21528.1
Unique NamemRNA_M-pyrifera_M_contig93224.21528.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: A0A7S4JY38_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JY38_9EUKA)

HSP 1 Score: 211 bits (536), Expect = 1.490e-59
Identity = 109/207 (52.66%), Postives = 147/207 (71.01%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDD-EDQLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSL 618
            +W+ +LKFMKFGDD +D LNAKDALLMW  NKTAGY+ V+V+ F    F++GLALCA++H  R  L+DY SLS   G   IE A + AEKYF +EKY+T EE ++ D+  MVVYVS+YYYG+A +RK D A RR  K + FT+  D  + E+N  + +F+  +  VE VL DR++ NTMAGA +++  F DYKKKDKGE++ + L+L
Sbjct:   94 VWACILKFMKFGDDADDSLNAKDALLMWVANKTAGYNGVKVEKFPNS-FRDGLALCALIHSGRPNLMDYDSLSG--GDAAIEAAFDGAEKYFQMEKYVTVEEFKKFDEISMVVYVSDYYYGMARERKKDRAARRLTKTVRFTKDMDERKAEFNQRSTKFRAHVTDVEKVLGDRSVSNTMAGAVEKLDAFADYKKKDKGELIGDHLNL 297          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: A0A6B2KXY4_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXY4_9EUKA)

HSP 1 Score: 205 bits (521), Expect = 5.970e-58
Identity = 104/213 (48.83%), Postives = 151/213 (70.89%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDDED--QLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLLDYSSLS-ASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            +W++ML+F+KFGD+E+   LNAKD+L++W +NK   Y  ++  +F  + +K+G ALCA++HKHR  LLD++++   +N  +NI  A +AA  YF L++Y+ P ++ +LD+  MVVYVSEYYYGIAEQRKVDLA RR +KLI FTE ND+LR +Y   A  F + L     VL DR + NT+ GA+++IA+FYDYK   K E+++ QLSL   +
Sbjct:  108 VWAVMLRFVKFGDEEEGASLNAKDSLMLWVKNKIDSY-GLDNTSFKSKCWKDGTALCALIHKHRPNLLDWNAVKQCTNPIENINRAFDAAHSYFDLDRYLEPSDLPKLDEASMVVYVSEYYYGIAEQRKVDLASRRINKLIAFTERNDSLREQYVQKAKHFVQNLNASRVVLGDRNVTNTLEGAKRKIAEFYDYKATTKNEMISEQLSLESFY 319          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: A0A6A7G8A1_9CRUS (Paramyosin n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8A1_9CRUS)

HSP 1 Score: 197 bits (500), Expect = 1.480e-54
Identity = 96/210 (45.71%), Postives = 139/210 (66.19%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDDEDQLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            IW +M KF++F DD+   N ++ALLMW  N+ A Y+  +V+ F    F NG+ALCA+LHKHR KL+D  SL+  +G  N+  A   AE+YF LE+++TPEE  +LDDK M +YVSEY+YG+A  RK +LA +R  +L+D+T  ND ++ ++   A   +  L +V  +L DR IDNTMAGA  ++A+F +YK+KDK EI    L +   +
Sbjct:   53 IWGLMRKFIRFSDDDSGPNPQEALLMWVNNQIASYNLPKVERFPGG-FHNGMALCAVLHKHRPKLIDMDSLNPLDGPGNLRKAFVGAERYFDLEQFLTPEEFVKLDDKSMFIYVSEYFYGVARMRKFELAAKRITRLVDYTRVNDQMKEDFKAKAEALRLHLDRVMKILNDRAIDNTMAGARHKLAEFSNYKEKDKSEIAGQYLDVESFY 261          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: A0A2P2ICP9_9CRUS (Paramyosin (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2ICP9_9CRUS)

HSP 1 Score: 188 bits (477), Expect = 8.620e-53
Identity = 91/211 (43.13%), Postives = 143/211 (67.77%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDDEDQLNAKDALLMWAQNKTAGYDNVE-VKNFGKEIFKNGLALCAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            IW++M KF++F DD+D  + +D+LLMW    T+ Y NV+ V+ F K+ F +G+ALC+I+HKHR KL+D  SL+ S G QN++ A   A KYF LE +++ +E  +LDDK M +YVSEY+YG+A  R+ +LA ++  +L+++T  ND ++ E+       +  L +V +VL +R IDNTMAGA++++A+F  YK+ DK EI    L++   +
Sbjct:  112 IWALMRKFIRFSDDDDGPSPQDSLLMWVNGHTSKYPNVKKVEKFPKD-FHDGMALCSIIHKHRPKLVDMDSLNPSLGPQNLQKAFQGAFKYFELEDFLSSQEFVKLDDKSMFIYVSEYFYGVARMRRFELAAKKISRLVEYTRVNDKMKAEFKEKTRNLRSHLDQVTTVLNNREIDNTMAGAKRKLAEFAHYKENDKSEIAGKYLNVESFY 321          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: F2UI74_SALR5 (Paramyosin n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI74_SALR5)

HSP 1 Score: 172 bits (435), Expect = 8.720e-46
Identity = 86/213 (40.38%), Postives = 137/213 (64.32%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDDEDQ-LNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLED--RTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            +W++M+K++KF  ++D+ L+ KDALL W    T G+ + +  NF    F++G+ LCA++HK R  L+DY SL+  +   N+  A  AA++YFGLE+Y+ P +I +LD+K M+VYVSEYY GI EQ K+DLA RR  +LI+FT  ND ++ +Y   AA  + ++++ E++L       DNTMAGA + +  F  Y+  +K  + +  + L  +F
Sbjct:  106 VWALMMKYLKFAQEDDETLSPKDALLRWVNLNTQGHAHAQATNFTTS-FRDGMVLCALIHKFRPDLIDYDSLTPEDPLANLATAMKAAQEYFGLEQYVEPSDIAKLDEKSMLVYVSEYYAGITEQLKLDLAFRRISQLIEFTIVNDKMKAQYEHDAADLRTRIQQAEAMLTSLPEKKDNTMAGARRLLETFDAYRSNEKRAMFSEHIKLEALF 317          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: A0A7S2EZC4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2EZC4_9EUKA)

HSP 1 Score: 152 bits (385), Expect = 7.040e-44
Identity = 78/144 (54.17%), Postives = 106/144 (73.61%), Query Frame = 1
Query:  199 DYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            ++S L  SN  Q   IA +AAEKYFGLE Y+TP ++ +LD+  +VVYVSEYYYG+ EQRK+DLA +R  K I  T  NDALR +YN +A  FK+++ +VE VL DRT+DNTMAGAEKR+ DFY YK  DK ++++++L   G++
Sbjct:    4 EWSELDTSNAAQ---IAFDAAEKYFGLEPYLTPADLLKLDEISLVVYVSEYYYGVQEQRKMDLAAKRIGKAIKLTIENDALREKYNGSAQAFKDKVGEVEQVLSDRTVDNTMAGAEKRLEDFYSYKLNDKTQLISHKLKGEGIY 144          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: A0A7S2ACD0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2ACD0_9EUKA)

HSP 1 Score: 147 bits (370), Expect = 9.020e-42
Identity = 78/138 (56.52%), Postives = 101/138 (73.19%), Query Frame = 1
Query:   34 GDDEDQLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLL-DYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALR 444
            GD ED LN KDALL WA+ +T GY+ VE+K  G + FK+GLALCA++HKHR +L+ D+ SL  SN      +A  AAEKYFGLE+Y+ P ++ ++D+   VVYVSEYYYGI EQRK+DLA ++  K+I  T TNDALR
Sbjct:    1 GDAEDTLNFKDALLHWARKQTQGYEGVELK--GWKSFKDGLALCALIHKHRPQLIGDWDSLDHSNAPS---VAFAAAEKYFGLEQYLEPGDLAKMDEMSTVVYVSEYYYGIYEQRKLDLAAKKIGKVIQLTITNDALR 133          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: A0A0B7B7H5_9EUPU (Uncharacterized protein n=3 Tax=Gastropoda TaxID=6448 RepID=A0A0B7B7H5_9EUPU)

HSP 1 Score: 147 bits (370), Expect = 3.980e-37
Identity = 77/213 (36.15%), Postives = 127/213 (59.62%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDDEDQLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEI---QQLDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            IW+I+L+F       ++L AK+ LL+W Q KTA Y NV V+NF    +K+GLA CA++H+HR +LLDY  LS  N  +N+  A + AEKY  + + + PE++    + D++ ++ YVS YY+  +  ++ + A  R  K++   + N+ L  EY   A+   E +++    LE+RT DNT+ G ++R+ +F DY++K K   L ++  L   F
Sbjct:  125 IWTIILRFAIQDITVEELTAKEGLLLWCQRKTAPYKNVNVQNFHLS-WKDGLAFCALIHRHRPELLDYYKLSRDNPIENLNTAFDIAEKYLDIPRMLDPEDMVNSAKPDERSVMAYVSSYYHAFSGAQQAETAANRICKVLKVNQENEKLMEEYERLASDLLEWIRRTRPWLENRTTDNTLPGTQRRLEEFRDYRRKQKPPKLEDKAKLENSF 336          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: UPI001E1D74D2 (alpha-actinin, sarcomeric-like isoform X1 n=4 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D74D2)

HSP 1 Score: 146 bits (369), Expect = 5.440e-37
Identity = 77/213 (36.15%), Postives = 126/213 (59.15%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDDEDQLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQL---DDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            IW+I+L+F       ++L AK+ LL+W Q KTA Y NV V+NF    FK+GLA CA++H+HR  L+DY SLS  N  +N+  A + AEK+  + + + PE++      D++ ++ YVS YY+  +  ++ + A  R  K++   + N+ L  EY   A+   E ++K    LE+RT DNT+ G ++++ +F DY++K K   L ++  L   F
Sbjct:  126 IWTIILRFAIQDITVEELTAKEGLLLWCQRKTAPYKNVNVQNFHLS-FKDGLAFCALIHRHRPDLIDYRSLSKDNPLENLNTAFDVAEKHLDIPRMLDPEDMVNSVKPDERSVMAYVSSYYHAFSGAQQAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRKTTPWLENRTTDNTLPGTQRKLDEFRDYRRKQKPPKLEDKARLENSF 337          
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Match: K1RH58_CRAGI (Alpha-actinin, sarcomeric n=3 Tax=Crassostrea TaxID=6564 RepID=K1RH58_CRAGI)

HSP 1 Score: 145 bits (367), Expect = 1.000e-36
Identity = 76/213 (35.68%), Postives = 126/213 (59.15%), Query Frame = 1
Query:    1 IWSIMLKFMKFGDDEDQLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLALCAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQL---DDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTTAAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQLSLTGVF 630
            IW+I+L+F       ++L AK+ LL+W Q KTA Y NV V+NF    FK+GLA CA++H+HR +L+DY  LS  N  +N+  A + AEK+  + + + PE++      D++ ++ YVS YY+  +  ++ + A  R  K++   + N+ L  EY   A+   E ++K    LE+RT DNT+ G ++++ +F DY++K K   L ++  L   F
Sbjct:  116 IWTIILRFAIQDITVEELTAKEGLLLWCQRKTAPYKNVNVQNFHLS-FKDGLAFCALIHRHRPELIDYHKLSKDNPLENLNTAFDVAEKHLDIPRMLDPEDMVNSVKPDERSVMAYVSSYYHAFSGAQQAETAANRICKVLKVNQENERLMEEYERLASDLLEWIRKTTPWLENRTTDNTLPGTQRKLEEFRDYRRKHKPPKLEDKARLENSF 327          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93224.21528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4JY38_9EUKA1.490e-5952.66Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A6B2KXY4_9EUKA5.970e-5848.83Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A6A7G8A1_9CRUS1.480e-5445.71Paramyosin n=1 Tax=Hirondellea gigas TaxID=1518452... [more]
A0A2P2ICP9_9CRUS8.620e-5343.13Paramyosin (Fragment) n=1 Tax=Hirondellea gigas Ta... [more]
F2UI74_SALR58.720e-4640.38Paramyosin n=1 Tax=Salpingoeca rosetta (strain ATC... [more]
A0A7S2EZC4_9EUKA7.040e-4454.17Hypothetical protein (Fragment) n=1 Tax=Stereomyxa... [more]
A0A7S2ACD0_9EUKA9.020e-4256.52Hypothetical protein (Fragment) n=1 Tax=Stereomyxa... [more]
A0A0B7B7H5_9EUPU3.980e-3736.15Uncharacterized protein n=3 Tax=Gastropoda TaxID=6... [more]
UPI001E1D74D25.440e-3736.15alpha-actinin, sarcomeric-like isoform X1 n=4 Tax=... [more]
K1RH58_CRAGI1.000e-3635.68Alpha-actinin, sarcomeric n=3 Tax=Crassostrea TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93224contigM-pyrifera_M_contig93224:1..754 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score172.2
Seed ortholog evalue2.6e-40
Seed eggNOG ortholog81824.XP_001748455.1
Preferred nameain1
KEGG koko:K05765
KEGG Pathwayko04360,ko04666,ko04810,ko05133,map04360,map04666,map04810,map05133
Hectar predicted targeting categoryother localisation
GOsGO:0000278,GO:0000281,GO:0000910,GO:0000912,GO:0000915,GO:0003674,GO:0003779,GO:0003786,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005826,GO:0005856,GO:0005938,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0008092,GO:0008150,GO:0009987,GO:0015629,GO:0016043,GO:0022402,GO:0022607,GO:0030029,GO:0030036,GO:0030674,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031032,GO:0032153,GO:0032155,GO:0032187,GO:0032432,GO:0032506,GO:0036214,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044837,GO:0044877,GO:0051015,GO:0051017,GO:0051179,GO:0051301,GO:0051764,GO:0060090,GO:0061572,GO:0061640,GO:0070650,GO:0070938,GO:0071520,GO:0071840,GO:0071944,GO:0090426,GO:0097435,GO:0099568,GO:1902405,GO:1902407,GO:1902410,GO:1903047,GO:1903475,GO:1903478,GO:1903479,GO:2000689
EggNOG free text desc.actin binding
EggNOG OGs38C3U@33154,COG5069@1,KOG0035@2759
COG Functional cat.Z
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Exons3
Model size630
Cds size618
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93224.21528.1prot_M-pyrifera_M_contig93224.21528.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93224 1..742 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816844.2553663-CDS-M-pyrifera_M_contig93224:0..4931622816844.2553663-CDS-M-pyrifera_M_contig93224:0..493Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93224 1..493 -
1692278211.7394097-CDS-M-pyrifera_M_contig93224:0..4931692278211.7394097-CDS-M-pyrifera_M_contig93224:0..493Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93224 1..493 -
1622816844.2663655-CDS-M-pyrifera_M_contig93224:560..6511622816844.2663655-CDS-M-pyrifera_M_contig93224:560..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93224 561..651 -
1692278211.7587304-CDS-M-pyrifera_M_contig93224:560..6511692278211.7587304-CDS-M-pyrifera_M_contig93224:560..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93224 561..651 -
1622816844.2796774-CDS-M-pyrifera_M_contig93224:708..7421622816844.2796774-CDS-M-pyrifera_M_contig93224:708..742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93224 709..742 -
1692278211.7696347-CDS-M-pyrifera_M_contig93224:708..7421692278211.7696347-CDS-M-pyrifera_M_contig93224:708..742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93224 709..742 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816844.2961023-UTR-M-pyrifera_M_contig93224:742..7541622816844.2961023-UTR-M-pyrifera_M_contig93224:742..754Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig93224 743..754 -
1692278211.7820032-UTR-M-pyrifera_M_contig93224:742..7541692278211.7820032-UTR-M-pyrifera_M_contig93224:742..754Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig93224 743..754 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93224.21528.1

>prot_M-pyrifera_M_contig93224.21528.1 ID=prot_M-pyrifera_M_contig93224.21528.1|Name=mRNA_M-pyrifera_M_contig93224.21528.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
MLKFMKFGDDEDQLNAKDALLMWAQNKTAGYDNVEVKNFGKEIFKNGLAL
CAILHKHREKLLDYSSLSASNGKQNIEIAQNAAEKYFGLEKYITPEEIQQ
LDDKCMVVYVSEYYYGIAEQRKVDLAVRRTHKLIDFTETNDALRTEYNTT
AAQFKEQLKKVESVLEDRTIDNTMAGAEKRIADFYDYKKKDKGEILANQL
SLTGVF
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mRNA from alignment at M-pyrifera_M_contig93224:1..754-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93224.21528.1 ID=mRNA_M-pyrifera_M_contig93224.21528.1|Name=mRNA_M-pyrifera_M_contig93224.21528.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=754bp|location=Sequence derived from alignment at M-pyrifera_M_contig93224:1..754- (Macrocystis pyrifera P11B4 male)
ATCTGGAGCATCATGCTCAAGTTCATGAAGTTCGGCGACGACGAGGGTGA GCGGCCTCTGAACATTTGAGTGTGCCCCGATTTGCCGACTGACAATCCTG CAGACCAGTTGAACGCCAAGGACGCCCTCCTCATGTGGGCCCAGAACAAG ACCGCTGGCTACGACAACGTTGAGGTCAAGAACTTTGGCAAGGAGTAAGC CACCCCCCCCCCCCCCCCCCCCCCCCTCCCTTACCTTTCTTCGTTTCGTG GCTGACCAGAGGATCTTCAAGAATGGCCTCGCTCTGTGTGCCATTCTCCA CAAGCACCGCGAGAAGCTGCTGGACTACAGCAGCCTCTCTGCCTCCAACG GCAAGCAGAACATCGAGATTGCCCAGAACGCCGCCGAGAAGTACTTCGGC CTGGAGAAGTACATCACTCCCGAGGAAATCCAGCAGCTGGACGACAAGTG CATGGTTGTGTACGTTTCGGAGTACTATTACGGCATCGCCGAGCAGCGTA AGGTCGACCTCGCAGTCCGCCGCACACACAAGCTGATCGACTTCACCGAG ACGAACGACGCCCTTCGCACAGAGTACAACACCACTGCAGCCCAGTTCAA GGAGCAGCTGAAGAAGGTGGAGAGCGTCCTTGAGGACCGCACCATCGACA ACACGATGGCCGGCGCCGAGAAGCGCATCGCAGACTTCTACGACTACAAG AAGAAGGACAAGGGCGAGATCCTGGCCAACCAGCTCAGCCTCACGGGCGT GTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93224:1..754-

>mRNA_M-pyrifera_M_contig93224.21528.1 ID=mRNA_M-pyrifera_M_contig93224.21528.1|Name=mRNA_M-pyrifera_M_contig93224.21528.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig93224:1..754- (Macrocystis pyrifera P11B4 male)
ATGCTCAAGTTCATGAAGTTCGGCGACGACGAGGATGCTCAAGTTCATGA
AGTTCGGCGACGACGAGGACCAGTTGAACGCCAAGGACGCCCTCCTCATG
TGGGCCCAGAACAAGACCGCTGGCTACGACAACGTTGAGGTCAAGAACTT
TGGCAAGGAACCAGTTGAACGCCAAGGACGCCCTCCTCATGTGGGCCCAG
AACAAGACCGCTGGCTACGACAACGTTGAGGTCAAGAACTTTGGCAAGGA
GATCTTCAAGAATGGCCTCGCTCTGTGTGCCATTCTCCACAAGCACCGCG
AGAAGCTGCTGGACTACAGCAGCCTCTCTGCCTCCAACGGCAAGCAGAAC
ATCGAGATTGCCCAGAACGCCGCCGAGAAGTACTTCGGCCTGGAGAAGTA
CATCACTCCCGAGGAAATCCAGCAGCTGGACGACAAGTGCATGGTTGTGT
ACGTTTCGGAGTACTATTACGGCATCGCCGAGCAGCGTAAGGTCGACCTC
GCAGTCCGCCGCACACACAAGCTGATCGACTTCACCGAGACGAACGACGC
CCTTCGCACAGAGTACAACACCACTGCAGCCCAGTTCAAGGAGCAGCTGA
AGAAGGTGGAGAGCGTCCTTGAGGACCGCACCATCGACAACACGATGGCC
GGCGCCGAGAAGCGCATCGCAGACTTCTACGACTACAAGAAGAAGGACAA
GGGCGAGATCCTGGCCAACCAGCTCAGCCTCACGGGCGTGTTCGATCTTC
AAGAATGGCCTCGCTCTGTGTGCCATTCTCCACAAGCACCGCGAGAAGCT
GCTGGACTACAGCAGCCTCTCTGCCTCCAACGGCAAGCAGAACATCGAGA
TTGCCCAGAACGCCGCCGAGAAGTACTTCGGCCTGGAGAAGTACATCACT
CCCGAGGAAATCCAGCAGCTGGACGACAAGTGCATGGTTGTGTACGTTTC
GGAGTACTATTACGGCATCGCCGAGCAGCGTAAGGTCGACCTCGCAGTCC
GCCGCACACACAAGCTGATCGACTTCACCGAGACGAACGACGCCCTTCGC
ACAGAGTACAACACCACTGCAGCCCAGTTCAAGGAGCAGCTGAAGAAGGT
GGAGAGCGTCCTTGAGGACCGCACCATCGACAACACGATGGCCGGCGCCG
AGAAGCGCATCGCAGACTTCTACGACTACAAGAAGAAGGACAAGGGCGAG
ATCCTGGCCAACCAGCTCAGCCTCACGGGCGTGTTC
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