mRNA_M-pyrifera_M_contig93158.21524.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig93158.21524.1
Unique NamemRNA_M-pyrifera_M_contig93158.21524.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A847GTE7_9BACT (YifB family Mg chelatase-like AAA ATPase n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GTE7_9BACT)

HSP 1 Score: 389 bits (1000), Expect = 2.500e-131
Identity = 201/251 (80.08%), Postives = 224/251 (89.24%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGFQRP DR+VINLAPAELPKQA+SFDLPI+LGMLAGSGQL SE+F +YAVVGELAL+G TRP KGALSMAIAAA +  L+G++V S SAAEAAVVE++EVIPV SLTQAV F +GTLDI PTP RLE+ F++++ Y+ DFADVRGQEMAKRAITIA  G HNLLM+GPPGSGKTMLAKRVPTILP L+A ESIETTRIYSAMG LRPGQPL+A RPFRSPHHTISDAGLVGGGS P PGEISLSHN
Sbjct:   52 AIVNSGFQRPQDRIVINLAPAELPKQASSFDLPISLGMLAGSGQLQSELFDKYAVVGELALEGNTRPVKGALSMAIAAAKQEGLRGLVVSSESAAEAAVVENVEVIPVASLTQAVGFFAGTLDIEPTPSRLEELFDSFSKYEDDFADVRGQEMAKRAITIAAAGAHNLLMIGPPGSGKTMLAKRVPTILPALSAAESIETTRIYSAMGRLRPGQPLMARRPFRSPHHTISDAGLVGGGSTPTPGEISLSHN 302          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A257TCT3_9BACT (Magnesium chelatase n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257TCT3_9BACT)

HSP 1 Score: 389 bits (998), Expect = 3.130e-131
Identity = 199/251 (79.28%), Postives = 222/251 (88.45%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            ALVNSGF RP +RVVINLAPA+LPKQAASFDLPITLG+LAGSGQL+SE F +YAVVGELALDGT RPTKGALSMAIAA  E +L+GI+VP  +A EAAVV  +EVI V SL QA AFLSG +DI PTPPR+++WF+ ++ Y+VDFADV+GQEMAKRAI IA  GGHNLLM+GPPGSGKTMLAKR+PTILP+LTA ESIETTRIYSAMGLL  GQPLLATRP+RSPHHTISDAGLVGGGS P PGEISLSHN
Sbjct:   37 ALVNSGFIRPQNRVVINLAPADLPKQAASFDLPITLGILAGSGQLVSEKFDQYAVVGELALDGTMRPTKGALSMAIAATNEKNLRGIIVPRENAGEAAVVAGVEVIAVSSLAQATAFLSGQIDIEPTPPRVDEWFQAFSRYEVDFADVKGQEMAKRAIVIAAAGGHNLLMIGPPGSGKTMLAKRLPTILPDLTAAESIETTRIYSAMGLLPAGQPLLATRPYRSPHHTISDAGLVGGGSTPTPGEISLSHN 287          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A3A0DLW6_9BACT (Magnesium chelatase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DLW6_9BACT)

HSP 1 Score: 380 bits (975), Expect = 2.340e-127
Identity = 194/265 (73.21%), Postives = 227/265 (85.66%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESH--------------LKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGF RP+DR+VINLAPAELPKQAASFDLPI LGMLAGSGQL S++F +YA+VGELAL+G+TRP KGALSMAI+AA +++              L+G++VP++SA EAAVV+ +EVIPV SL +AVAFLSG L+I PTPPR++ WF  ++ YDVDFADVRGQEMAKRA+TIA  G HNLLMLGPPGSGKTMLAKRVPTI+P L+A ESIETTRIYSAMGLL+ GQPL+ATRP+RSPHHTIS+AGLVGGGS P PGEISLSHN
Sbjct:   52 AIVNSGFMRPNDRIVINLAPAELPKQAASFDLPIALGMLAGSGQLASDLFDQYAIVGELALEGSTRPVKGALSMAISAAKQANTAKQAAAHNGEHKKLRGLIVPAASAREAAVVDAVEVIPVSSLAEAVAFLSGQLEIEPTPPRIDQWFHEFSRYDVDFADVRGQEMAKRALTIAAAGSHNLLMLGPPGSGKTMLAKRVPTIMPTLSAGESIETTRIYSAMGLLKEGQPLMATRPYRSPHHTISNAGLVGGGSTPTPGEISLSHN 316          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A0F9C0G5_9ZZZZ (Mg_chelatase domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9C0G5_9ZZZZ)

HSP 1 Score: 373 bits (958), Expect = 4.100e-127
Identity = 191/251 (76.10%), Postives = 219/251 (87.25%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGFQRP  R+VINLAPAELPKQAASFDLPITLG+LA SGQ+ S+ F  YAVVGELALDG TRP KGALSMAI+AA +  L+G+LVPS+SAAEAAVVED+EVI + SL QAV FL+G +DI PTP RL++ F   +TYD DF+DVRGQEMAKRA+T+A  GGHNLLM+GPPGSGKTMLAKRVPTILP+LT+ ESIETTRIYSA+G L+ GQPLLA RPFR PHHTIS+AGLVGGGS P+PGEISL+HN
Sbjct:   52 AIVNSGFQRPQCRIVINLAPAELPKQAASFDLPITLGILAASGQIESDRFDRYAVVGELALDGNTRPAKGALSMAISAAKQDGLQGVLVPSASAAEAAVVEDVEVISISSLAQAVGFLTGEIDIEPTPSRLDELFRELSTYDADFSDVRGQEMAKRAMTVAAAGGHNLLMVGPPGSGKTMLAKRVPTILPDLTSGESIETTRIYSAVGRLKAGQPLLAVRPFRPPHHTISNAGLVGGGSTPSPGEISLAHN 302          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A3L7S1E0_9BACT (ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7S1E0_9BACT)

HSP 1 Score: 373 bits (957), Expect = 9.640e-125
Identity = 188/257 (73.15%), Postives = 223/257 (86.77%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESH------LKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGF RP+DR+V+NLAPAELPKQAA+FDLPITLG+LAGSGQ  SE   +YAVVGEL+L+G+TRP +GALS+A+AAA +        LKG++VPS+SA EAAVVEDI+VIPV SLT+AV F SG+LDIPPTPPR+++WF+ +A YDVDF DVRGQE AKRAI +A  GGHN LM+GPPG GKTMLAKR+PTILP L+A ESIETTRIYSA+GLL+PGQPL+ATRPFR+PHHTIS+AGLVGG S P PGEISL+HN
Sbjct:   52 AMVNSGFNRPNDRIVVNLAPAELPKQAATFDLPITLGILAGSGQFSSERLLDYAVVGELSLEGSTRPARGALSIAMAAARQKRTRECRPLKGVVVPSASATEAAVVEDIDVIPVASLTEAVRFFSGSLDIPPTPPRVDEWFDRFAAYDVDFTDVRGQEAAKRAICVAAAGGHNCLMVGPPGGGKTMLAKRIPTILPPLSATESIETTRIYSALGLLQPGQPLMATRPFRAPHHTISEAGLVGGRSVPMPGEISLAHN 308          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A1G2ZY93_9BACT (Magnesium chelatase n=1 Tax=Planctomycetes bacterium RBG_16_64_10 TaxID=1801970 RepID=A0A1G2ZY93_9BACT)

HSP 1 Score: 372 bits (956), Expect = 1.140e-124
Identity = 189/251 (75.30%), Postives = 219/251 (87.25%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGF+RP DRVVINLAPAELPKQAASFDLPITLGMLA SGQL S+ F +YAVVGELALDGTTRPT+GALSMA+AAA +  L+G++VP++SAAEAAVVE +EV+PV SL +A  F +GT+ + P P +LE++      Y VDFADVRGQEMAKRA TIA  G HN+LM+GPPGSGKTMLAKR+PT+LP+LTA ESIETTRIYS +GLL+PGQPLLATRP+R+PHHTISDAGLVGGGS PAPGEISLSHN
Sbjct:   52 AMVNSGFRRPRDRVVINLAPAELPKQAASFDLPITLGMLASSGQLQSDRFDQYAVVGELALDGTTRPTRGALSMAMAAAQQGRLRGLVVPAASAAEAAVVEGLEVLPVSSLAEAAGFFAGTVPLEPAPAQLEEFLTRLGHYTVDFADVRGQEMAKRAATIAAAGAHNMLMIGPPGSGKTMLAKRLPTVLPDLTAAESIETTRIYSTVGLLKPGQPLLATRPYRAPHHTISDAGLVGGGSIPAPGEISLSHN 302          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A7D8YG66_9PLAN (ATP-binding protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7D8YG66_9PLAN)

HSP 1 Score: 366 bits (940), Expect = 4.640e-124
Identity = 185/251 (73.71%), Postives = 212/251 (84.46%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGF RP DRVVINLAP +LPKQA SFDLP+ LG+LAGSGQL+S+   +YAVVGELAL+G  RP KGALSMAIA A ++ LKG++VPS +A EAA+VE+IEVIPV  L QAVAFL+G +DIP  P RL+ WFE Y+ YDVDF DVRGQEMAKRAI +A  G HNL+M+GPPGSGKTMLAKR+PT+LP+LT  ESIETTRIYSA+G L PGQPL+A RPFRSPHHTISDAGLVGGGS P PGEIS SHN
Sbjct:   52 AIVNSGFIRPQDRVVINLAPGDLPKQAPSFDLPVALGVLAGSGQLISDRLDQYAVVGELALEGHARPIKGALSMAIATARQAGLKGLIVPSDNAQEAAIVEEIEVIPVSGLAQAVAFLAGQIDIPSYPSRLDQWFEQYSAYDVDFGDVRGQEMAKRAIMLAAAGSHNLIMIGPPGSGKTMLAKRMPTVLPQLTPGESIETTRIYSALGQLPPGQPLMARRPFRSPHHTISDAGLVGGGSPPTPGEISKSHN 302          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A7V4M3Q2_9BACT (ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4M3Q2_9BACT)

HSP 1 Score: 369 bits (948), Expect = 1.840e-123
Identity = 190/251 (75.70%), Postives = 215/251 (85.66%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGFQRP  RVVINLAPA+LPK+AASFDLPI LG+L GSGQ+ SE    YAVVGELALDG+TRP KGALSMA+A A     +G++VPS SAAEAAVVE IEVIPV SL+QAV FLSG L+I PTP RL D F  ++ Y+ DFADVRGQEMAKRA+T+A  GGHNLLM+GPPGSGKTMLAKR+PTILP+L   ESIETTRIYSA+G L+PGQPL+ATRPFR+PHHTISDAGLVGGGS PAPGEISL+HN
Sbjct:   52 AMVNSGFQRPQSRVVINLAPADLPKEAASFDLPIALGILLGSGQIASEKLDRYAVVGELALDGSTRPAKGALSMALATAQRDGQRGLIVPSQSAAEAAVVERIEVIPVASLSQAVGFLSGDLEIEPTPSRLGDLFREFSQYEEDFADVRGQEMAKRAMTVAAAGGHNLLMVGPPGSGKTMLAKRLPTILPDLEPEESIETTRIYSALGRLKPGQPLMATRPFRAPHHTISDAGLVGGGSTPAPGEISLAHN 302          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A7C7STJ6_9PLAN (ATP-binding protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7STJ6_9PLAN)

HSP 1 Score: 369 bits (947), Expect = 2.530e-123
Identity = 185/251 (73.71%), Postives = 217/251 (86.45%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSG++RP+DRVVINLAPAELPKQAASFDLP+TLGMLA SGQ +SE F EYAVVGEL+L+G TRP +GALSMA+AAA    ++G+LVP+ +A EAAVVEDI+VIP+DSL QA+ F +G++DIPP+P  L+  F TYA YD+DF+DVRGQE+ KRA+TI  GG HN+LM+GPPGSGKTMLAKRVPT+LP LT  ESIETTRIYS MGLL   QPL+A RPFRSPHHTISDAGLVGGGS P+PGEISLSHN
Sbjct:   52 AIVNSGYERPNDRVVINLAPAELPKQAASFDLPMTLGMLAASGQFVSERFLEYAVVGELSLEGKTRPVRGALSMAMAAAELKGIRGLLVPAENAGEAAVVEDIDVIPIDSLAQAIGFYNGSMDIPPSPSNLDQLFATYAQYDLDFSDVRGQELVKRALTITAGGRHNILMMGPPGSGKTMLAKRVPTVLPPLTPEESIETTRIYSVMGLLGNNQPLMAQRPFRSPHHTISDAGLVGGGSTPSPGEISLSHN 302          
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Match: A0A3L7PI12_9BACT (ATP-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PI12_9BACT)

HSP 1 Score: 369 bits (948), Expect = 2.580e-123
Identity = 187/259 (72.20%), Postives = 222/259 (85.71%), Query Frame = 1
Query:    1 ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVFSEYAVVGELALDGTTRPTKGALSMAIAAA--------AESHLKGILVPSSSAAEAAVVEDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRGQEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIETTRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSHN 753
            A+VNSGF RP++R+V+NLAPAELPKQAA+FDLPITLG+LAGSGQ  S+   +YAVVGEL+L+GTTRPT+GALS+AIAAA         E  L+G++VP++SA EAAVVEDIEVIPV SL +AV F +G +DIPP PPR+ +WF+ YA+YD+DFADVRGQE AKRAI +A  GGHN+LM+GPPG GKTMLAKRVPTILP L+A ESIETTRIYSA+GLL PGQPL+ATRPFR+PHHTIS+AGLVGG S P PGEISL+HN
Sbjct:   52 AMVNSGFNRPNERIVVNLAPAELPKQAATFDLPITLGILAGSGQFSSDRLLDYAVVGELSLEGTTRPTRGALSIAIAAARQRREQIDGERPLRGVVVPAASAMEAAVVEDIEVIPVSSLAEAVRFFAGDIDIPPAPPRVSEWFDRYASYDLDFADVRGQEAAKRAICVAAAGGHNVLMVGPPGGGKTMLAKRVPTILPPLSAAESIETTRIYSALGLLHPGQPLMATRPFRAPHHTISEAGLVGGRSIPMPGEISLAHN 310          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93158.21524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847GTE7_9BACT2.500e-13180.08YifB family Mg chelatase-like AAA ATPase n=1 Tax=C... [more]
A0A257TCT3_9BACT3.130e-13179.28Magnesium chelatase n=1 Tax=Planctomycetia bacteri... [more]
A0A3A0DLW6_9BACT2.340e-12773.21Magnesium chelatase n=1 Tax=Planctomycetes bacteri... [more]
A0A0F9C0G5_9ZZZZ4.100e-12776.10Mg_chelatase domain-containing protein (Fragment) ... [more]
A0A3L7S1E0_9BACT9.640e-12573.15ATP-binding protein n=1 Tax=Planctomycetes bacteri... [more]
A0A1G2ZY93_9BACT1.140e-12475.30Magnesium chelatase n=1 Tax=Planctomycetes bacteri... [more]
A0A7D8YG66_9PLAN4.640e-12473.71ATP-binding protein (Fragment) n=1 Tax=Planctomyce... [more]
A0A7V4M3Q2_9BACT1.840e-12375.70ATP-binding protein n=1 Tax=Planctomycetes bacteri... [more]
A0A7C7STJ6_9PLAN2.530e-12373.71ATP-binding protein n=1 Tax=Planctomycetaceae bact... [more]
A0A3L7PI12_9BACT2.580e-12372.20ATP-binding protein n=1 Tax=Planctomycetes bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93158contigM-pyrifera_M_contig93158:3..755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score356.7
Seed ortholog evalue9e-96
Seed eggNOG ortholog243090.RB9808
Preferred namecomM
KEGG koko:K07391
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM Magnesium chelatase, ChlI subunit
EggNOG OGs2IWTT@203682,COG0606@1,COG0606@2
COG Functional cat.O
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size753
Cds size753
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816844.0996854-CDS-M-pyrifera_M_contig93158:2..7551622816844.0996854-CDS-M-pyrifera_M_contig93158:2..755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93158 3..755 -
1692278211.6625578-CDS-M-pyrifera_M_contig93158:2..7551692278211.6625578-CDS-M-pyrifera_M_contig93158:2..755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig93158 3..755 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93158.21524.1prot_M-pyrifera_M_contig93158.21524.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig93158 3..755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig93158.21524.1

>prot_M-pyrifera_M_contig93158.21524.1 ID=prot_M-pyrifera_M_contig93158.21524.1|Name=mRNA_M-pyrifera_M_contig93158.21524.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=251bp
ALVNSGFQRPHDRVVINLAPAELPKQAASFDLPITLGMLAGSGQLLSEVF
SEYAVVGELALDGTTRPTKGALSMAIAAAAESHLKGILVPSSSAAEAAVV
EDIEVIPVDSLTQAVAFLSGTLDIPPTPPRLEDWFETYATYDVDFADVRG
QEMAKRAITIAGGGGHNLLMLGPPGSGKTMLAKRVPTILPELTAPESIET
TRIYSAMGLLRPGQPLLATRPFRSPHHTISDAGLVGGGSNPAPGEISLSH
N
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mRNA from alignment at M-pyrifera_M_contig93158:3..755-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig93158.21524.1 ID=mRNA_M-pyrifera_M_contig93158.21524.1|Name=mRNA_M-pyrifera_M_contig93158.21524.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=753bp|location=Sequence derived from alignment at M-pyrifera_M_contig93158:3..755- (Macrocystis pyrifera P11B4 male)
GCCCTGGTCAACTCCGGCTTCCAACGGCCACACGATCGGGTCGTGATAAA TCTTGCCCCTGCAGAGCTCCCGAAACAGGCGGCCTCGTTCGACTTGCCGA TTACCTTGGGAATGTTGGCCGGCAGTGGTCAACTGCTCTCCGAAGTGTTC AGCGAGTATGCCGTCGTCGGAGAGTTGGCACTTGATGGCACGACGCGACC CACCAAGGGGGCGCTTTCGATGGCCATCGCCGCGGCGGCAGAATCGCATC TCAAGGGCATTCTGGTTCCCAGTTCCAGCGCGGCAGAGGCGGCGGTGGTC GAAGACATCGAAGTGATCCCCGTCGATAGTCTGACTCAGGCCGTGGCGTT TCTCAGTGGCACGCTCGACATCCCTCCAACTCCACCGCGACTGGAAGATT GGTTCGAGACGTACGCCACCTACGATGTCGACTTCGCCGACGTGCGTGGT CAAGAGATGGCCAAAAGGGCAATCACCATTGCCGGAGGCGGAGGACACAA TTTGCTAATGCTGGGACCGCCCGGCTCGGGGAAAACTATGTTGGCGAAAC GTGTGCCGACCATTCTGCCTGAGTTAACCGCGCCGGAATCGATCGAAACC ACCCGCATCTACAGTGCGATGGGGCTCTTGCGTCCGGGACAACCACTGTT GGCCACGCGACCGTTTCGCAGCCCTCACCATACGATCAGCGATGCCGGAC TAGTCGGCGGTGGGTCGAATCCGGCGCCCGGTGAAATCAGCTTGTCGCAC AAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig93158:3..755-

>mRNA_M-pyrifera_M_contig93158.21524.1 ID=mRNA_M-pyrifera_M_contig93158.21524.1|Name=mRNA_M-pyrifera_M_contig93158.21524.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1506bp|location=Sequence derived from alignment at M-pyrifera_M_contig93158:3..755- (Macrocystis pyrifera P11B4 male)
GCCCTGGTCAACTCCGGCTTCCAACGGCCACACGATCGGGTCGTGATAAA
TCTTGCCCCTGCAGAGCTCCCGAAACAGGCGGCCTCGTTCGACTTGCCGA
TTACCTTGGGAATGTTGGCCGGCAGTGGTCAACTGCTCTCCGAAGTGTTC
AGCGAGTATGCCGTCGTCGGAGAGTTGGCACTTGATGGCACGACGCGACC
CACCAAGGGGGCGCTTTCGATGGCCATCGCCGCGGCGGCAGAATCGCATC
TCAAGGGCATTCTGGTTCCCAGTTCCAGCGCGGCAGAGGCGGCGGTGGTC
GAAGACATCGAAGTGATCCCCGTCGATAGTCTGACTCAGGCCGTGGCGTT
TCTCAGTGGCACGCTCGACATCCCTCCAACTCCACCGCGACTGGAAGATT
GGTTCGAGACGTACGCCACCTACGATGTCGACTTCGCCGACGTGCGTGGT
CAAGAGATGGCCAAAAGGGCAATCACCATTGCCGGAGGCGGAGGACACAA
TTTGCTAATGCTGGGACCGCCCGGCTCGGGGAAAACTATGTTGGCGAAAC
GTGTGCCGACCATTCTGCCTGAGTTAACCGCGCCGGAATCGATCGAAACC
ACCCGCATCTACAGTGCGATGGGGCTCTTGCGTCCGGGACAACCACTGTT
GGCCACGCGACCGTTTCGCAGCCCTCACCATACGATCAGCGATGCCGGAC
TAGTCGGCGGTGGGTCGAATCCGGCGCCCGGTGAAATCAGCTTGTCGCAC
AATGCCCTGGTCAACTCCGGCTTCCAACGGCCACACGATCGGGTCGTGAT
AAATCTTGCCCCTGCAGAGCTCCCGAAACAGGCGGCCTCGTTCGACTTGC
CGATTACCTTGGGAATGTTGGCCGGCAGTGGTCAACTGCTCTCCGAAGTG
TTCAGCGAGTATGCCGTCGTCGGAGAGTTGGCACTTGATGGCACGACGCG
ACCCACCAAGGGGGCGCTTTCGATGGCCATCGCCGCGGCGGCAGAATCGC
ATCTCAAGGGCATTCTGGTTCCCAGTTCCAGCGCGGCAGAGGCGGCGGTG
GTCGAAGACATCGAAGTGATCCCCGTCGATAGTCTGACTCAGGCCGTGGC
GTTTCTCAGTGGCACGCTCGACATCCCTCCAACTCCACCGCGACTGGAAG
ATTGGTTCGAGACGTACGCCACCTACGATGTCGACTTCGCCGACGTGCGT
GGTCAAGAGATGGCCAAAAGGGCAATCACCATTGCCGGAGGCGGAGGACA
CAATTTGCTAATGCTGGGACCGCCCGGCTCGGGGAAAACTATGTTGGCGA
AACGTGTGCCGACCATTCTGCCTGAGTTAACCGCGCCGGAATCGATCGAA
ACCACCCGCATCTACAGTGCGATGGGGCTCTTGCGTCCGGGACAACCACT
GTTGGCCACGCGACCGTTTCGCAGCCCTCACCATACGATCAGCGATGCCG
GACTAGTCGGCGGTGGGTCGAATCCGGCGCCCGGTGAAATCAGCTTGTCG
CACAAT
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