mRNA_M-pyrifera_M_contig93149.21520.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: C3XQV9_BRAFL (VWFA domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XQV9_BRAFL) HSP 1 Score: 106 bits (265), Expect = 2.610e-26 Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 1 Query: 1 CRGAVDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 CR VD+VF+LDGSGS+ + N+Q + T F IG ++++ VV Y S SP+ LDRY + L AI I Y GGT TG+A+DY TT T S GAR +GVP+VI+VVTDGQS D V P++RA+ +GI Sbjct: 42 CRMPVDLVFLLDGSGSIGDSNFQVTKNFVATTTSDFQIGP--DNAQVSVVQYES-SPTEEF--PLDRYATLEDLLSAINLIPYRGGGTRTGRAIDYVVTTTLTVSRGAR---QGVPKVIIVVTDGQSGDDVREPARRAKQSGI 176
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: C3XQX7_BRAFL (VWFA domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XQX7_BRAFL) HSP 1 Score: 98.2 bits (243), Expect = 6.790e-23 Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 1 CRGAVDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 CR VD+VF+LDGSGS+ + N+Q + T F IG ++++G+V Y++ + L++Y + + L AI +I Y GGTYTG A+DY T S GAR + VP+V++VVTDGQS D V P+ RA+ +GI Sbjct: 40 CRMPVDLVFLLDGSGSIGDSNFQVTKNFVATTTSDFQIGP--NNAQVGIVQYANWLYEE---VSLNQYKTLDELLPAIYNISYWGGGTYTGWAIDYVVNATLTESRGAR---QDVPKVVIVVTDGQSADDVRQPALRAKQSGI 174
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: C3XS83_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XS83_BRAFL) HSP 1 Score: 99.4 bits (246), Expect = 1.130e-22 Identity = 61/139 (43.88%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 13 VDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 VD+VF+LDGSGS+ PN++ N T F IG +++GVV Y L++Y + + L AI++I Y GGT TGKA+D+ T S GAR GVP+V++VVTDGQS DSV AP++RA +GI Sbjct: 3 VDLVFLLDGSGSITAPNFEITKSFVQNTTSDFQIGTAH--TQVGVVQYEDNPYDE---FPLNQYATLDELLTAIRNITYRGGGTQTGKAIDHVVDNSLTESHGARP---GVPKVVIVVTDGQSWDSVVAPAQRANHSGI 133
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: A0A8J9YPB0_BRALA (MUC4 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YPB0_BRALA) HSP 1 Score: 102 bits (253), Expect = 2.240e-22 Identity = 65/143 (45.45%), Postives = 84/143 (58.74%), Query Frame = 1 Query: 1 CRGAVDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 CR VD+VF+LDGSGS+ PN++ N T F IG +++GVV YSS P+ L+RY S + L AI +I Y GGT TGKA+ Y T GAR GVP+V++VVTDGQS D V P++RA +GI Sbjct: 1279 CRMPVDLVFLLDGSGSITAPNFKITKSFVQNTTSDFQIGTAH--TQVGVVQYSS-DPTEEF--PLNRYTSLDDLLPAINNIPYRGGGTQTGKAITYVLDNSLTEWHGARP---GVPKVVIVVTDGQSDDDVTPPAQRANGSGI 1413
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: A0A8B7XH29_ACAPL (uncharacterized protein LOC110973524 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XH29_ACAPL) HSP 1 Score: 101 bits (252), Expect = 2.480e-22 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 13 VDMVFVLDGSGSV--LEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 +D+VFVLDGSGSV ++ N K +LA + + F+IG + +R+GV+ YSS S + L + LKEA+ +I Y GGT TG+ALD + T F P GAR +G PRV VVVTDGQS DSV P++RAR GI Sbjct: 198 LDLVFVLDGSGSVGSVDFNTTKNFVLA--MVDFFDIGPDK--TRVGVIQYSS---SPQIEFHLKSFTDKALLKEAVINIRYKDGGTNTGEALDEMSDTSFLPENGARPPGRGFPRVAVVVTDGQSHDSVTGPAERARQKGI 331
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: A0A6P5A167_BRABE (mucin-like protein isoform X1 n=2 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A167_BRABE) HSP 1 Score: 100 bits (248), Expect = 9.970e-22 Identity = 64/143 (44.76%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 1 CRGAVDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 CR VD+VF+LDGSGS+ PN++ N T F IG ++ + VV Y S SP L+RY + + L AI++I Y +GGT TG A+DY + T GAR GVP+V++VVTDG S DSV APS+RA + I Sbjct: 180 CRMPVDLVFLLDGSGSITAPNFEITKNFVQNTTSDFQIGP--ANTLVAVVQYQS-SPHDEF--PLNRYTTLDELLPAIRNISYRSGGTQTGLAIDYVLDSSLTEYNGARP---GVPKVVIVVTDGHSGDSVVAPSQRAHQSEI 314
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: UPI0015FF977A (mucin-like protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FF977A) HSP 1 Score: 99.4 bits (246), Expect = 1.910e-21 Identity = 61/139 (43.88%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 13 VDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 VD+VF+LDGSGS+ PN++ N T F IG +++GVV Y L++Y + + L AI++I Y GGT TGKA+D+ T S GAR GVP+V++VVTDGQS DSV AP++RA +GI Sbjct: 3 VDLVFLLDGSGSITAPNFEITKSFVQNTTSDFQIGTAH--TQVGVVQYEDNPYDE---FPLNQYATLDELLTAIRNITYRGGGTQTGKAIDHVVDNSLTESHGARP---GVPKVVIVVTDGQSWDSVVAPAQRANHSGI 133
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: A0A6P4YS65_BRABE (collagen alpha-3(VI) chain-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YS65_BRABE) HSP 1 Score: 99.4 bits (246), Expect = 1.940e-21 Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 1 CRGAVDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 C +D+VFVLDG+GSV E N+++ + + FNIG GQ +R+G++ Y++ + I LD Y + L EAI +I Y G T TG+ALDYT F+P+ GAR GV +V +V+TDG S D V P++R R A I Sbjct: 1618 CSAVLDLVFVLDGTGSVGEENFERIKAIVQKLVTNFNIGAGQ--TRVGIIQYAN---IQQMEISLDAYSDVDSLVEAIGNIGYIGGNTLTGQALDYTWKFGFSPNNGART---GVVQVAIVITDGVSDDEVSNPAQRMRKAQI 1752
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: UPI001F03FBDA (uncharacterized protein LOC124443411 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03FBDA) HSP 1 Score: 98.2 bits (243), Expect = 4.540e-21 Identity = 58/145 (40.00%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 1 CRGAVDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGK--GQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 C +VD+VF+LD SGSV N+QK L N+ ++F + G+G SR G+ +S+ P L+ Y + + + AI+S++Y +G TY G AL T FT + G R KGVPR+++++TDG++TDSV P+K RD I Sbjct: 255 CNSSVDLVFLLDESGSVSRGNFQKSLDFVLNIIKSFPDERLSGEGGSRFGLSTFST--PPYISHFHLNDYTTQSEYRTAIESVKYNSGWTYLGDALQNILTDQFTENRGLRPAVKGVPRILIILTDGKATDSVLTPAKNIRDNEI 397
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Match: A0A6P5AI24_BRABE (uncharacterized protein LOC109486543 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AI24_BRABE) HSP 1 Score: 97.8 bits (242), Expect = 5.010e-21 Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 13 VDMVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSPSASLVIKLDRYFSANRLKEAIQSIEYPTGGTYTGKALDYTTTTLFTPSGGARDTTKGVPRVIVVVTDGQSTDSVDAPSKRARDAGI 429 +DMVFVLDGSGSV N++ S+V +AF IG Q +RIGVV YS+ + L Y + ++ AI +I Y G TYTG AL Y T F+ GAR + +P+V +VVTDG++TD+V P+ RA +AGI Sbjct: 176 MDMVFVLDGSGSVGADNFETVKDFVSSVVDAFEIG--QSRTRIGVVQYSNEIQNE---FNLTEYGNKPDVQSAIGNITYLQGSTYTGAALRYMTDVSFSLEAGARPAYQAIPKVGIVVTDGEATDNVRGPADRAHEAGI 309 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93149.21520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig93149.21520.1 >prot_M-pyrifera_M_contig93149.21520.1 ID=prot_M-pyrifera_M_contig93149.21520.1|Name=mRNA_M-pyrifera_M_contig93149.21520.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp MVFVLDGSGSVLEPNWQKELLLASNVTEAFNIGKGQGDSRIGVVPYSSGSback to top mRNA from alignment at M-pyrifera_M_contig93149:329..757+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig93149.21520.1 ID=mRNA_M-pyrifera_M_contig93149.21520.1|Name=mRNA_M-pyrifera_M_contig93149.21520.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig93149:329..757+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig93149:329..757+ >mRNA_M-pyrifera_M_contig93149.21520.1 ID=mRNA_M-pyrifera_M_contig93149.21520.1|Name=mRNA_M-pyrifera_M_contig93149.21520.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig93149:329..757+ (Macrocystis pyrifera P11B4 male)back to top |