mRNA_M-pyrifera_M_contig92918.21488.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92918.21488.1
Unique NamemRNA_M-pyrifera_M_contig92918.21488.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A8H3F9L7_9LECA (Zinc transporter n=1 Tax=Gomphillus americanus TaxID=1940652 RepID=A0A8H3F9L7_9LECA)

HSP 1 Score: 87.0 bits (214), Expect = 1.370e-17
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 1 
Query:   22 RMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            R+FS   D  R+ +++ L F  M ++   G+ +GSL L++D  H+FFD  A+ VGL+A  LS R+ +L +PQGF + D+LAGF NGVLL A+   I  EA  RL  GS
Sbjct:  526 RVFS-KKDSRRIIYFMTLNFSFMLIQGVYGFLTGSLGLLSDTVHMFFDCVALAVGLVATVLSERQPSLEYPQGFKMVDSLAGFGNGVLLLAISIEIVYEAIERLASGS 632
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A1W5D806_9LECA (Zinc transporter n=2 Tax=Lasallia pustulata TaxID=136370 RepID=A0A1W5D806_9LECA)

HSP 1 Score: 78.6 bits (192), Expect = 1.270e-14
Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 1 
Query:   13 PPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            P L     + D  R+ ++++L FV M V+   G ++GSL L++D+ H+FFD  A+VVGL A  +S    +  FP G+   D LAGFANG+ L  +   I  EA  RL  GS
Sbjct:  572 PLLYSILAEKDSRRIFYFMILNFVFMLVQTFYGIATGSLGLLSDSIHMFFDCLALVVGLCASVMSKWPPSARFPYGYGKMDTLAGFANGIFLMLISVEIVYEAIERLVEGS 682
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A507QU85_MONPU (Zinc transporter n=1 Tax=Monascus purpureus TaxID=5098 RepID=A0A507QU85_MONPU)

HSP 1 Score: 77.8 bits (190), Expect = 2.350e-14
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 1 
Query:   10 HPPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            +P L     + D  R+ +++ L F  M V+   G+ +GSL L++D+ H+FFD  A+VVGL A  +S   ++  FP G+   D L+GFANGV L  +   I  EA  RLF GS
Sbjct:  466 YPLLHSIIREKDSRRIFYFMCLNFGFMLVQLSYGFLTGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPSSPRFPYGYGKVDTLSGFANGVFLMIISIEIIYEAIERLFSGS 577
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A232LNZ1_9EURO (Zinc transporter n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232LNZ1_9EURO)

HSP 1 Score: 77.8 bits (190), Expect = 2.360e-14
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 1 
Query:    7 SHPPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            S+P L     + D  R+ +++ L FV M V+   G+ +GSL L++D+ H+FFD  A+VVGL A  +S    +  FP G+   D L+GFANG+ L  +   I  EA  RL  GS
Sbjct:  508 SYPLLYSILKEDDSRRIFYFMCLNFVFMLVQLSYGFITGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSSRFPYGYGKVDTLSGFANGIFLMIISVEIIYEAIERLLSGS 620
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A5N6Z9E3_9EURO (Zinc transporter n=1 Tax=Aspergillus coremiiformis TaxID=138285 RepID=A0A5N6Z9E3_9EURO)

HSP 1 Score: 77.0 bits (188), Expect = 4.380e-14
Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 
Query:    1 SPSHPPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            S  +P L     ++D  R+ +++ L F  M V+   G+ +GSL L++D+ H+FFD  A+VVGL A  +S    +  FP G+   D L+GFANG+ L  +   I  EAA RL  GS
Sbjct:  483 SEPYPLLYSILKESDSRRIFYFMGLNFAFMLVQLSYGFLTGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSARFPYGYGKVDTLSGFANGIFLMIISIEIIYEAAERLSTGS 597
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A8H3EGT3_9LECA (Zinc transporter n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3EGT3_9LECA)

HSP 1 Score: 77.0 bits (188), Expect = 4.390e-14
Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 1 
Query:   13 PPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            P L     + D  R+ ++++L F  M V+   G ++GSL L++D+ H+FFD  A+VVGL A  +S    +  FP GF   D LAGFANG+ L  +   I  EAA RL  GS
Sbjct:  470 PLLHSILLEKDSRRIFYFMLLNFGFMLVQTFYGVATGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSTRFPYGFGKMDTLAGFANGIFLMLISVEIVYEAAERLAEGS 580
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A1L9WPS2_ASPA1 (Zinc transporter n=8 Tax=Aspergillus TaxID=5052 RepID=A0A1L9WPS2_ASPA1)

HSP 1 Score: 77.0 bits (188), Expect = 4.400e-14
Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 
Query:    1 SPSHPPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            S S+P L     ++D  R+ +++ L F  M V+   G+ +GSL L++D+ H+FFD  A+VVGL A  +S    +  FP G+   D L+GFANG+ L  +   I  EA  RL  GS
Sbjct:  489 SESYPLLYSILKESDSRRIFYFMCLNFSFMLVQLAYGFLTGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSSRFPYGYGKVDTLSGFANGIFLMIISIEIIYEAVERLSSGS 603
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A165IKU5_XYLHT (Zinc transporter n=1 Tax=Xylona heveae (strain CBS 132557 / TC161) TaxID=1328760 RepID=A0A165IKU5_XYLHT)

HSP 1 Score: 76.6 bits (187), Expect = 5.130e-14
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 1 
Query:   13 PPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            P L     + D  R+ ++++L F  M V+   G ++GSL L++D+ H+FFD  A+V+GL A  +S    ++ FP GF   DAL+GFANG+ L  +   I  EA  RL  GS
Sbjct:   27 PLLHSILVEKDSRRIFYFMLLNFGFMLVQTFYGLATGSLGLLSDSIHMFFDCLALVLGLCASVMSKWPPSMRFPYGFGKMDALSGFANGIFLMLISIEIVYEAIERLVEGS 137
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A1L9RYS1_ASPWE (Zinc transporter n=1 Tax=Aspergillus wentii DTO 134E9 TaxID=1073089 RepID=A0A1L9RYS1_ASPWE)

HSP 1 Score: 76.6 bits (187), Expect = 6.000e-14
Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:    1 SPSHPPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            S  +P L     ++D  R+ +++ L F  M V+   G+ +GSL L++D+ H+FFD  A+VVGL A  +S    +  FP G+   D L+GFANG+ L  +   I  EA  RL  GS
Sbjct:  507 SEPYPLLYSILKESDSRRIFYFMALNFTFMIVQLSYGFMTGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSSRFPYGYGKVDTLSGFANGIFLMIISIEIIYEAVERLSSGS 621
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BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Match: A0A0F4YQY6_TALEM (Zinc transporter n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YQY6_TALEM)

HSP 1 Score: 76.6 bits (187), Expect = 6.050e-14
Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 1 
Query:    7 SHPPLRMFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGAVVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAALRLFRGS 345
            S+P +     + D  R+ +++ L F  M V+   G+ +GSL L++D+ H+FFD  A+VVGL A  +S    +  FP G+   D L+GFANGV L  +   I  EA  RL  GS
Sbjct:  629 SYPLIHSILKEDDSRRIFYFMSLNFAFMLVQLCYGYITGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSTRFPYGYGKVDTLSGFANGVFLMIISVEIVYEAVERLLSGS 741
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92918.21488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H3F9L7_9LECA1.370e-1745.37Zinc transporter n=1 Tax=Gomphillus americanus Tax... [more]
A0A1W5D806_9LECA1.270e-1440.54Zinc transporter n=2 Tax=Lasallia pustulata TaxID=... [more]
A0A507QU85_MONPU2.350e-1440.18Zinc transporter n=1 Tax=Monascus purpureus TaxID=... [more]
A0A232LNZ1_9EURO2.360e-1439.82Zinc transporter n=1 Tax=Elaphomyces granulatus Ta... [more]
A0A5N6Z9E3_9EURO4.380e-1439.13Zinc transporter n=1 Tax=Aspergillus coremiiformis... [more]
A0A8H3EGT3_9LECA4.390e-1441.44Zinc transporter n=1 Tax=Heterodermia speciosa Tax... [more]
A0A1L9WPS2_ASPA14.400e-1439.13Zinc transporter n=8 Tax=Aspergillus TaxID=5052 Re... [more]
A0A165IKU5_XYLHT5.130e-1439.64Zinc transporter n=1 Tax=Xylona heveae (strain CBS... [more]
A0A1L9RYS1_ASPWE6.000e-1438.26Zinc transporter n=1 Tax=Aspergillus wentii DTO 13... [more]
A0A0F4YQY6_TALEM6.050e-1438.94Zinc transporter n=1 Tax=Rasamsonia emersonii CBS ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92918contigM-pyrifera_M_contig92918:377..721 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score76.6
Seed ortholog evalue7.6e-12
Seed eggNOG ortholog176275.XP_008598540.1
Preferred nameMSC2
KEGG koko:K14692
KEGG TC2.A.4.4.3,2.A.4.4.5
Hectar predicted targeting categorysignal peptide
GOsGO:0000041,GO:0000139,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005801,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0006873,GO:0006875,GO:0006882,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0012505,GO:0015075,GO:0015318,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0031090,GO:0031224,GO:0031984,GO:0032879,GO:0033106,GO:0034220,GO:0042175,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0055065,GO:0055069,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0061088,GO:0065007,GO:0065008,GO:0070838,GO:0071577,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098791,GO:0098827,GO:1904257
EggNOG free text desc.Cation efflux protein zinc transporter
EggNOG OGs2151A@147550,38DVB@33154,3NUJZ@4751,3QMGD@4890,3THU4@5125,COG1230@1,KOG1484@2759
COG Functional cat.P
Best tax levelHypocreales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size345
Cds size321
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816842.4864395-UTR-M-pyrifera_M_contig92918:376..4001622816842.4864395-UTR-M-pyrifera_M_contig92918:376..400Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92918 377..400 +
1692278210.7464266-UTR-M-pyrifera_M_contig92918:376..4001692278210.7464266-UTR-M-pyrifera_M_contig92918:376..400Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92918 377..400 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816842.500354-CDS-M-pyrifera_M_contig92918:400..7211622816842.500354-CDS-M-pyrifera_M_contig92918:400..721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92918 401..721 +
1692278210.7640789-CDS-M-pyrifera_M_contig92918:400..7211692278210.7640789-CDS-M-pyrifera_M_contig92918:400..721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92918 401..721 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92918.21488.1prot_M-pyrifera_M_contig92918.21488.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92918 401..721 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92918.21488.1

>prot_M-pyrifera_M_contig92918.21488.1 ID=prot_M-pyrifera_M_contig92918.21488.1|Name=mRNA_M-pyrifera_M_contig92918.21488.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
MFSGDADGTRLTWYLVLVFVVMCVEAGVGWSSGSLALVADAGHLFFDAGA
VVVGLLARSLSSRRATLAFPQGFALADALAGFANGVLLAAVGWSIGVEAA
LRLFRGS
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mRNA from alignment at M-pyrifera_M_contig92918:377..721+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92918.21488.1 ID=mRNA_M-pyrifera_M_contig92918.21488.1|Name=mRNA_M-pyrifera_M_contig92918.21488.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=345bp|location=Sequence derived from alignment at M-pyrifera_M_contig92918:377..721+ (Macrocystis pyrifera P11B4 male)
TCGCCCTCCCATCCACCACTACGCATGTTTTCAGGTGATGCGGATGGGAC
GAGGCTTACTTGGTACCTTGTGTTGGTGTTTGTGGTGATGTGCGTGGAAG
CAGGGGTGGGTTGGTCTTCGGGGAGCCTTGCTCTGGTTGCAGACGCGGGC
CATCTTTTTTTCGACGCCGGTGCGGTGGTGGTGGGGTTGTTGGCGCGGAG
TCTGTCGTCTCGTCGGGCGACGTTGGCGTTTCCGCAGGGGTTTGCACTGG
CGGATGCGTTGGCAGGGTTTGCGAATGGGGTGCTATTGGCCGCCGTAGGG
TGGAGCATCGGCGTGGAGGCTGCGTTGCGTCTGTTCCGCGGCAGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92918:377..721+

>mRNA_M-pyrifera_M_contig92918.21488.1 ID=mRNA_M-pyrifera_M_contig92918.21488.1|Name=mRNA_M-pyrifera_M_contig92918.21488.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig92918:377..721+ (Macrocystis pyrifera P11B4 male)
ATGTTTTCAGGTGATGCGGATGGGACGAGGCTTACTTGGTACCTTGTGTT
GGTGTTTGTGGTGATGTGCGTGGAAGCAGGGGTGGGTTGGTCTTCGGGGA
GCCTTGCTCTGGTTGCAGACGCGGGCCATCTTTTTTTCGACGCCGGTGCG
GTGGTGGTGGGGTTGTTGGCGCGGAGTCTGTCGTCTCGTCGGGCGACGTT
GGCGTTTCCGCAGGGGTTTGCACTGGCGGATGCGTTGGCAGGGTTTGCGA
ATGGGGTGCTATTGGCCGCCGTAGGGTGGAGCATCGGCGTGGAGGCTGCG
TTGCGTCTGTTCCGCGGCAGTATGTTTTCAGGTGATGCGGATGGGACGAG
GCTTACTTGGTACCTTGTGTTGGTGTTTGTGGTGATGTGCGTGGAAGCAG
GGGTGGGTTGGTCTTCGGGGAGCCTTGCTCTGGTTGCAGACGCGGGCCAT
CTTTTTTTCGACGCCGGTGCGGTGGTGGTGGGGTTGTTGGCGCGGAGTCT
GTCGTCTCGTCGGGCGACGTTGGCGTTTCCGCAGGGGTTTGCACTGGCGG
ATGCGTTGGCAGGGTTTGCGAATGGGGTGCTATTGGCCGCCGTAGGGTGG
AGCATCGGCGTGGAGGCTGCGTTGCGTCTGTTCCGCGGCAGT
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