mRNA_M-pyrifera_M_contig92911.21484.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: A0A3N4IWW6_ASCIM (Uncharacterized protein n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IWW6_ASCIM) HSP 1 Score: 89.7 bits (221), Expect = 2.370e-18 Identity = 49/94 (52.13%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 52 LRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFGVEERAVGG----ATVVTVPSFCKTRQAVLLDLSSLSATTITF 321 L +L TLRWR +APTCPDTL YPF DPF +E ESPHV FAG Q FG E VG T++ +PSF +T+Q V LDL ++ AT + F Sbjct: 380 LDLLERTLRWRCVAPTCPDTLWTYPFNDRDPFTIE--ESPHVYFAGNQPSFGTRE-VVGPNGEKTTIIMLPSFAETKQVVRLDLETMQATPLRF 470
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: A0A2P6TSX7_CHLSO (DNA polymerase delta small subunit n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSX7_CHLSO) HSP 1 Score: 85.5 bits (210), Expect = 7.470e-17 Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 58 MLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREF--GVEERAVGGAT-VVTVPSFCKTRQAVLLDLSSLSATTITF 321 +L L+WR LAPT PDTLAAYP+ SDPF++E SPHVLFAG Q F GV E A GG+ +V +P+FC T VLL+LS+L+ I F Sbjct: 371 ILGKLLQWRHLAPTAPDTLAAYPYYESDPFILES--SPHVLFAGGQPAFATGVAEVAGGGSVRLVAIPNFCSTGCVVLLNLSTLACQPIYF 459
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: E1ZH34_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZH34_CHLVA) HSP 1 Score: 83.6 bits (205), Expect = 3.620e-16 Identity = 49/92 (53.26%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 58 MLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFG---VEERAVGGAT-VVTVPSFCKTRQAVLLDLSSLSATTITF 321 +L LRWR LAPT PDTLAAYP+ +DPF++ +PHVLFAG Q +FG VEE A G A VV VP+FC T VL++L++L I F Sbjct: 374 ILEKLLRWRHLAPTAPDTLAAYPYFNNDPFILRS--TPHVLFAGGQPQFGTALVEEEAGGAACRVVAVPNFCTTGCVVLVNLATLYCQPIYF 463
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: A0A7R9Y024_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y024_9VIRI) HSP 1 Score: 82.0 bits (201), Expect = 1.280e-15 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 52 LRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFGVEERAVGGATVVTVPSFCKTRQAVLLDLSSL 300 L +L TLRWR LAPT PD+LA+YP++ DPFVV+D SPHV FAG QR+F + + V G +V VP F T Q VL++ +L Sbjct: 373 LELLEATLRWRHLAPTAPDSLASYPYSDEDPFVVQD--SPHVYFAGNQRQF--DTKLVEGVRLVCVPDFATTGQIVLVNTHTL 451
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: UPI00053F81EA (DNA polymerase delta small subunit isoform X1 n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F81EA) HSP 1 Score: 79.7 bits (195), Expect = 7.850e-15 Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 52 LRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFGVEERAVGG-----ATVVTVPSFCKTRQAVLLDLSSLSATTITFGT 327 L + TLRWR LAPT P+TL YPF DPFV+E PHV F G Q + E R + G A +VT+P FC T AV+L+L +L T++FGT Sbjct: 343 LEFVERTLRWRHLAPTAPNTLGCYPFTDRDPFVLES--CPHVYFVGNQDVY--ESRLLKGSEGQMARIVTIPKFCDTGVAVVLNLRNLECHTLSFGT 435
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: A0A059A347_EUCGR (Uncharacterized protein n=9 Tax=Myrtoideae TaxID=1699513 RepID=A0A059A347_EUCGR) HSP 1 Score: 79.7 bits (195), Expect = 7.870e-15 Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 52 LRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFGVEERAVGGAT-----VVTVPSFCKTRQAVLLDLSSLSATTITFGT 327 L + TLRWR LAPT P+TL YPFA DPF++E PHV F G Q ++ E + + G+ ++++P FC+T AV+L+L +L T+TFGT Sbjct: 346 LEFMERTLRWRHLAPTAPNTLGCYPFADRDPFLIES--CPHVYFVGNQDKY--ETQMLKGSEGQLVRLISIPKFCETGTAVVLNLKNLECHTLTFGT 438
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: A0A060T813_BLAAD (ARAD1B24398p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T813_BLAAD) HSP 1 Score: 79.0 bits (193), Expect = 1.560e-14 Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 52 LRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFG---VEERAVGGATVVTVPSFCKTRQAVLLDLSSL 300 L M+ +TLRW+ APT PDTL +YPF+ DPF+V E+PH+ FAG Q+E+ +EE+ V +VTVP F K+ Q VL+DL +L Sbjct: 381 LAMMESTLRWQHAAPTAPDTLWSYPFSDKDPFIVS--ETPHIYFAGNQKEYSTRIIEEQGVE-VRLVTVPEFYKSGQFVLVDLETL 463
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: A0A2R5G712_9STRA (DNA polymerase delta subunit 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G712_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.600e-14 Identity = 53/109 (48.62%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 46 AGLRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFGVEERAV----GGAT-VVTVPSFCKTRQAVLLDLSS--LSATTITFGTPPTQRSGE 351 +GL ++ TL+WR +APT PDTLA YP DPFV++ E PH+ F G Q F E+R V GG T VV+VP F T Q VL+DLSS L TTI F GE Sbjct: 388 SGLDLMEETLQWRHIAPTAPDTLACYPLTTVDPFVMQ--ERPHLYFCGNQPAF--EDRLVHSLHGGFTRVVSVPEFATTGQVVLVDLSSEYLDCTTIQFDGLDDDNDGE 492
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: UPI000874B08E (DNA polymerase delta small subunit n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000874B08E) HSP 1 Score: 78.6 bits (192), Expect = 1.990e-14 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 52 LRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFGVEERAVGGAT-----VVTVPSFCKTRQAVLLDLSSLSATTITFGT 327 L L N L+W +APT PDTL +P+ DPF+++D PHV F G Q EFG R G ++++P FC T QAV+L+L +L T+ F T Sbjct: 339 LEALENCLQWNHIAPTAPDTLGCFPYYNKDPFILDD--CPHVFFVGNQAEFGT--RMASGENGQKVRLISIPEFCNTFQAVILNLKTLDCNTVIFDT 431
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Match: L1JIW9_GUITC (DNA polymerase delta small subunit n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JIW9_GUITC) HSP 1 Score: 78.6 bits (192), Expect = 2.090e-14 Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 52 LRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVVEDGESPHVLFAGCQREFGVEERAVGG-----ATVVTVPSFCKTRQAVLLDLSSLSATTITFGT 327 L ++ N L+WR LAPT PDTL +P DPF++ PH+ FAG Q+ FG R + G + +V+VPSF +T+ AV +D+ +L+AT I+FGT Sbjct: 360 LDVMQNLLQWRHLAPTAPDTLPCFPVKDEDPFILP--HCPHIFFAGNQKTFG--SRTIDGEKGQKSLLVSVPSFSRTKTAVEVDVRTLTATPISFGT 452 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92911.21484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92911.21484.1 >prot_M-pyrifera_M_contig92911.21484.1 ID=prot_M-pyrifera_M_contig92911.21484.1|Name=mRNA_M-pyrifera_M_contig92911.21484.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp SSSSSSSSSSPPFSSAGLRMLCNTLRWRVLAPTCPDTLAAYPFAGSDPFVback to top mRNA from alignment at M-pyrifera_M_contig92911:172..570- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92911.21484.1 ID=mRNA_M-pyrifera_M_contig92911.21484.1|Name=mRNA_M-pyrifera_M_contig92911.21484.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=399bp|location=Sequence derived from alignment at M-pyrifera_M_contig92911:172..570- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92911:172..570- >mRNA_M-pyrifera_M_contig92911.21484.1 ID=mRNA_M-pyrifera_M_contig92911.21484.1|Name=mRNA_M-pyrifera_M_contig92911.21484.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig92911:172..570- (Macrocystis pyrifera P11B4 male)back to top |