mRNA_M-pyrifera_M_contig92899.21480.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92899.21480.1
Unique NamemRNA_M-pyrifera_M_contig92899.21480.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: A0A3M8G661_9BACT (Alanine--tRNA ligase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G661_9BACT)

HSP 1 Score: 478 bits (1231), Expect = 2.330e-161
Identity = 222/253 (87.75%), Postives = 238/253 (94.07%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            V SAPV PK DPTLLFTNAGMNQFKPIFLGEE+ L HDGK W+RAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKK+AI WAWELLVDRWGM+P RLYATVFGGDEEDGLPVDEEAIELWKS+T+I+HDHILKFGKKDNFWEMG+TGPCGPCSE+HIDLRS+EER +++GA+LVNMDDPRVMEIWNLVFIQFNR  D TLKTLPA+HVDTGMGFERVCAVLQ K SNYD DVFTPLLD+IS
Sbjct:   25 VSSAPVVPKEDPTLLFTNAGMNQFKPIFLGEEEFLTHDGKNWSRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKDAILWAWELLVDRWGMDPGRLYATVFGGDEEDGLPVDEEAIELWKSQTNIAHDHILKFGKKDNFWEMGDTGPCGPCSEIHIDLRSEEERQQQNGAELVNMDDPRVMEIWNLVFIQFNRLPDDTLKTLPAKHVDTGMGFERVCAVLQDKFSNYDSDVFTPLLDQIS 277
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BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: A0A2D8CFA3_9BACT (Alanine--tRNA ligase n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CFA3_9BACT)

HSP 1 Score: 477 bits (1227), Expect = 1.120e-160
Identity = 221/253 (87.35%), Postives = 235/253 (92.89%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            VDSAPV PKNDPTLLFTNAGMNQFK IFLGEE AL H+GK WNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAI WAWELLVD WG+ PDRLYATVFGGDEEDGLPVDEEAIELWKSETSI HDHILK GKKDNFWEMGETGPCGPCSE+HIDLR DE+R K+ GA LVNMDDPRVMEIWNLVFIQFNR+ DS+L+ LPAQHVDTGMGFER+CAVLQ KTSNYD DVFTP++++I+
Sbjct:   25 VDSAPVVPKNDPTLLFTNAGMNQFKSIFLGEEDALKHEGKNWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIGWAWELLVDEWGLEPDRLYATVFGGDEEDGLPVDEEAIELWKSETSIDHDHILKCGKKDNFWEMGETGPCGPCSEVHIDLRPDEDRKKKPGADLVNMDDPRVMEIWNLVFIQFNRKPDSSLEKLPAQHVDTGMGFERICAVLQNKTSNYDTDVFTPVINKIA 277
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BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: A0A1B6Y9Y0_9BACT (Alanine--tRNA ligase n=7 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A1B6Y9Y0_9BACT)

HSP 1 Score: 472 bits (1215), Expect = 6.550e-159
Identity = 220/253 (86.96%), Postives = 235/253 (92.89%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            V+SAPVAPKNDPTLLFTNAGMNQFKPIFLGEEK L+H+GK WNRAADTQKCIRVSGKHNDLEEVG+DTYHHTLFEMLGNWSFGDYFKKEAI WAWELLVD+WG+NPD+LYATVFGGD+ED LPVDEEAIELWKSETSI H HILK GKKDNFWEMG+TGPCGPCSE+HIDLRS+EER + DGA LVN DDPRVMEIWNLVFIQFNRQ D +L+ LP  HVDTGMGFERVCAVLQGKTSNYD DVFTPLL+ IS
Sbjct:   25 VESAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKTLSHEGKEWNRAADTQKCIRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIGWAWELLVDKWGLNPDQLYATVFGGDDEDRLPVDEEAIELWKSETSIDHAHILKCGKKDNFWEMGDTGPCGPCSEIHIDLRSEEERKEVDGATLVNADDPRVMEIWNLVFIQFNRQKDGSLQPLPDMHVDTGMGFERVCAVLQGKTSNYDSDVFTPLLNTIS 277
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BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: A0A2D9FXP0_9BACT (Alanine--tRNA ligase n=4 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FXP0_9BACT)

HSP 1 Score: 472 bits (1214), Expect = 8.760e-159
Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            VDSAPV PKNDPTLLFTNAGMNQFK IFLGEE AL H+GKLW+RAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAI WAWELLVD+WG++PDRLYATVF GDE D LPVD+EAIELWKSETSI HDHILK  KKDNFWEMGETGPCGPCSE+HIDLRSDEER  + G  LVNMDDPRVMEIWNLVFIQFNR+ D++L+ LPAQHVDTGMGFERVCAVLQ KTSNYD DVFTPLLDEIS
Sbjct:   25 VDSAPVVPKNDPTLLFTNAGMNQFKAIFLGEEDALKHEGKLWSRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIGWAWELLVDKWGLDPDRLYATVFEGDEADSLPVDDEAIELWKSETSIDHDHILKCSKKDNFWEMGETGPCGPCSEVHIDLRSDEERKNKPGRDLVNMDDPRVMEIWNLVFIQFNRKPDASLEKLPAQHVDTGMGFERVCAVLQEKTSNYDTDVFTPLLDEIS 277
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BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: UPI00037413B7 (alanine--tRNA ligase n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00037413B7)

HSP 1 Score: 472 bits (1214), Expect = 8.760e-159
Identity = 219/253 (86.56%), Postives = 234/253 (92.49%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            VDSAPVAPKNDPTLLFTNAGMNQFKP FLGEEK L HDGK W RA DTQKCIRVSGKHNDL+EVGHDTYHHTLFEMLGNWSFGDYFKKEAI WAW+LLV++WG+ PDRLYATVFGGD+EDGLPVDEEAIELWKSETSI  +HILKF KKDNFWEMG+TGPCGPCSE+HIDLR++EER K DGA LVNMDDPRVMEIWNLVFIQFNRQ D +L+ LP +HVDTGMGFERVCAVLQGKTSNYD DVFTPLLD+IS
Sbjct:   25 VDSAPVAPKNDPTLLFTNAGMNQFKPQFLGEEKTLKHDGKEWTRATDTQKCIRVSGKHNDLDEVGHDTYHHTLFEMLGNWSFGDYFKKEAIGWAWDLLVNKWGLEPDRLYATVFGGDDEDGLPVDEEAIELWKSETSIKPEHILKFDKKDNFWEMGDTGPCGPCSEVHIDLRTNEEREKVDGATLVNMDDPRVMEIWNLVFIQFNRQPDGSLEMLPDKHVDTGMGFERVCAVLQGKTSNYDSDVFTPLLDQIS 277
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BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: A0A651GBJ1_9BACT (Alanine--tRNA ligase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A651GBJ1_9BACT)

HSP 1 Score: 468 bits (1204), Expect = 2.560e-157
Identity = 211/253 (83.40%), Postives = 237/253 (93.68%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            VDSAPV PK+DPTLLFTNAGMNQFKP+FLGE++ L  DGK+WNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFK+EAI WAWELLVDRWG++P+RLYATVF G+E++GLPVD+E+I+LWK +TSI HDHIL FGKKDNFWEMGETGPCGPCSE+HIDLRSDEER K+ GA+LVNMDDPRVMEIWNLVFIQFNRQ+D +L  LPAQHVDTGMGFER+CAVLQGKTSNYD D+F P+++EIS
Sbjct:   25 VDSAPVVPKDDPTLLFTNAGMNQFKPVFLGEQEGLKEDGKIWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKEEAIEWAWELLVDRWGLDPERLYATVFEGNEDEGLPVDQESIDLWKKKTSIPHDHILTFGKKDNFWEMGETGPCGPCSEVHIDLRSDEERAKQPGAELVNMDDPRVMEIWNLVFIQFNRQADGSLVKLPAQHVDTGMGFERICAVLQGKTSNYDTDIFQPVIEEIS 277
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BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: UPI001F026162 (alanine--tRNA ligase n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F026162)

HSP 1 Score: 463 bits (1191), Expect = 3.310e-155
Identity = 212/253 (83.79%), Postives = 234/253 (92.49%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            VDSAPV PK+DPTLLFTNAGMNQFKPIFLGEE  LN  GKLW RAA+TQ+CIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFK+EAI WAWELLV+RWGM PDRLYATVFGGDE++GLPVDEE+IELW+S+TSIS DHILKFGKKDNFWEMG+TGPCGPCSE+HIDLR DEER K+ G+++VNMDDPRVMEIWNLVFIQFNR  D +L+ LPAQHVDTGMGFER+CAVLQGK SNYD D+F P+LD+IS
Sbjct:   39 VDSAPVVPKDDPTLLFTNAGMNQFKPIFLGEEDGLNEKGKLWKRAANTQRCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKEEAIEWAWELLVERWGMEPDRLYATVFGGDEDEGLPVDEESIELWRSKTSISPDHILKFGKKDNFWEMGDTGPCGPCSEIHIDLRPDEERKKKPGSEIVNMDDPRVMEIWNLVFIQFNRLQDGSLEKLPAQHVDTGMGFERLCAVLQGKKSNYDSDIFEPILDKIS 291
[Close]
BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: UPI001EDA2E8A (alanine--tRNA ligase n=1 Tax=Rhodohalobacter sp. WB101 TaxID=2911366 RepID=UPI001EDA2E8A)

HSP 1 Score: 462 bits (1190), Expect = 3.400e-155
Identity = 214/253 (84.58%), Postives = 232/253 (91.70%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            V+SAPV P +DPTLLFTNAGMNQFK IFL EEK L   GKLW RAA+TQ+CIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFK+EAI WAWELLVDRWGM PDRLYATVFGGDEEDGLPVD+E+IELWKS+TSI   HILKFGKKDNFWEMGETGPCGPCSE+HIDLR DEER K+ GA++VNMDDPRVMEIWNLVFIQFNRQ DS+L+ LPAQHVDTGMGFER+CAVLQGK SNYD D+FTP+LD+IS
Sbjct:   25 VNSAPVVPNDDPTLLFTNAGMNQFKSIFLDEEKGLEEKGKLWKRAANTQRCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKEEAIEWAWELLVDRWGMEPDRLYATVFGGDEEDGLPVDDESIELWKSKTSIDPSHILKFGKKDNFWEMGETGPCGPCSEVHIDLRPDEERKKKPGAEIVNMDDPRVMEIWNLVFIQFNRQQDSSLEKLPAQHVDTGMGFERLCAVLQGKRSNYDTDIFTPILDKIS 277
[Close]
BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: A0A6A8Q9P7_9BACT (Alanine--tRNA ligase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q9P7_9BACT)

HSP 1 Score: 460 bits (1184), Expect = 2.770e-154
Identity = 215/253 (84.98%), Postives = 229/253 (90.51%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            V+SAPV PK+DPTLLFTNAGMNQFKPIFLGEE+AL+HDGK W+RA DTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAI W WELLVD WGM  DRLYATVF GD+EDGLPVD EAIELWKSETSI H HILK  KKDNFWEMG+TGPCGPCSE+HIDLR DEER K DGA+LVN DDPRV+EIWNLVFIQFNR+ D +L+ LPAQHVDTGMGFER+CAVLQGK SNYD DVFTPLLD IS
Sbjct:   25 VESAPVVPKDDPTLLFTNAGMNQFKPIFLGEEEALSHDGKKWSRATDTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIGWCWELLVDIWGMEADRLYATVFEGDDEDGLPVDAEAIELWKSETSIDHGHILKCDKKDNFWEMGDTGPCGPCSEVHIDLRPDEEREKVDGAQLVNKDDPRVIEIWNLVFIQFNRKPDGSLEKLPAQHVDTGMGFERLCAVLQGKVSNYDSDVFTPLLDRIS 277
[Close]
BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Match: A0A6M1SVR1_9BACT (Alanine--tRNA ligase n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SVR1_9BACT)

HSP 1 Score: 459 bits (1180), Expect = 1.070e-153
Identity = 211/253 (83.40%), Postives = 229/253 (90.51%), Query Frame = 1 
Query:    1 VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQKCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVDRWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKDNFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLVFIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLDEIS 759
            V SAPV P+NDPTLLFTNAGMNQFKPIFLGEE  L  + K W RAADTQ+CIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAI WAWELLVD+WG+ PDR+YATVF GDEEDGLPVD+E+I+LWKSET I+ DHILKF KKDNFWEMG+TGPCGPCSE+HIDLR DEER K+ GA LVNMDDPRVMEIWNLVFIQFNRQ DS+LK LPA+HVDTGMGFER+CAVLQGK SNYD D+F PLLD+IS
Sbjct:   25 VSSAPVVPQNDPTLLFTNAGMNQFKPIFLGEESGLKREEKTWKRAADTQRCIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIGWAWELLVDKWGLEPDRMYATVFEGDEEDGLPVDQESIDLWKSETGIAEDHILKFDKKDNFWEMGDTGPCGPCSEVHIDLRPDEEREKKPGADLVNMDDPRVMEIWNLVFIQFNRQPDSSLKKLPARHVDTGMGFERICAVLQGKKSNYDTDLFEPLLDKIS 277
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92899.21480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M8G661_9BACT2.330e-16187.75Alanine--tRNA ligase n=1 Tax=Balneola sp. TaxID=20... [more]
A0A2D8CFA3_9BACT1.120e-16087.35Alanine--tRNA ligase n=3 Tax=Balneolaceae TaxID=18... [more]
A0A1B6Y9Y0_9BACT6.550e-15986.96Alanine--tRNA ligase n=7 Tax=Bacteroidetes/Chlorob... [more]
A0A2D9FXP0_9BACT8.760e-15987.35Alanine--tRNA ligase n=4 Tax=Balneolaceae TaxID=18... [more]
UPI00037413B78.760e-15986.56alanine--tRNA ligase n=1 Tax=Balneola vulgaris Tax... [more]
A0A651GBJ1_9BACT2.560e-15783.40Alanine--tRNA ligase n=1 Tax=Balneolaceae bacteriu... [more]
UPI001F0261623.310e-15583.79alanine--tRNA ligase n=1 Tax=Rhodohalobacter sp. 6... [more]
UPI001EDA2E8A3.400e-15584.58alanine--tRNA ligase n=1 Tax=Rhodohalobacter sp. W... [more]
A0A6A8Q9P7_9BACT2.770e-15484.98Alanine--tRNA ligase n=1 Tax=Balneolaceae bacteriu... [more]
A0A6M1SVR1_9BACT1.070e-15383.40Alanine--tRNA ligase n=1 Tax=Balneolaceae bacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92899contigM-pyrifera_M_contig92899:2..760 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score479.9
Seed ortholog evalue7.1e-133
Seed eggNOG ortholog1121930.AQXG01000001_gene1212
Preferred namealaS
KEGG rclassRC00055,RC00523
KEGG koko:K01872
KEGG ReactionR03038
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EggNOG OGs1INPU@117747,4NFHW@976,COG0013@1,COG0013@2
EC6.1.1.7
COG Functional cat.J
Best tax levelSphingobacteriia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816841.8220787-CDS-M-pyrifera_M_contig92899:1..7601622816841.8220787-CDS-M-pyrifera_M_contig92899:1..760Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92899 2..760 +
1692278210.1884658-CDS-M-pyrifera_M_contig92899:1..7601692278210.1884658-CDS-M-pyrifera_M_contig92899:1..760Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92899 2..760 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92899.21480.1prot_M-pyrifera_M_contig92899.21480.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92899 2..760 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92899.21480.1

>prot_M-pyrifera_M_contig92899.21480.1 ID=prot_M-pyrifera_M_contig92899.21480.1|Name=mRNA_M-pyrifera_M_contig92899.21480.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=253bp
VDSAPVAPKNDPTLLFTNAGMNQFKPIFLGEEKALNHDGKLWNRAADTQK
CIRVSGKHNDLEEVGHDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLVD
RWGMNPDRLYATVFGGDEEDGLPVDEEAIELWKSETSISHDHILKFGKKD
NFWEMGETGPCGPCSELHIDLRSDEERTKEDGAKLVNMDDPRVMEIWNLV
FIQFNRQSDSTLKTLPAQHVDTGMGFERVCAVLQGKTSNYDWDVFTPLLD
EIS
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mRNA from alignment at M-pyrifera_M_contig92899:2..760+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92899.21480.1 ID=mRNA_M-pyrifera_M_contig92899.21480.1|Name=mRNA_M-pyrifera_M_contig92899.21480.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=759bp|location=Sequence derived from alignment at M-pyrifera_M_contig92899:2..760+ (Macrocystis pyrifera P11B4 male)
GTAGATAGCGCACCCGTAGCGCCTAAAAATGATCCAACGCTTTTATTTAC
CAACGCAGGAATGAACCAGTTCAAGCCTATTTTTTTAGGAGAAGAAAAAG
CACTAAATCACGATGGTAAACTATGGAATCGTGCAGCCGATACCCAAAAA
TGTATTCGAGTTAGTGGAAAACATAACGATTTAGAAGAAGTTGGGCATGA
TACTTATCATCATACCCTATTCGAGATGCTTGGGAATTGGTCATTTGGAG
ATTATTTCAAGAAAGAAGCAATTGCTTGGGCTTGGGAATTATTGGTAGAC
CGTTGGGGTATGAATCCCGATCGATTATACGCTACGGTGTTTGGTGGTGA
TGAGGAAGATGGACTTCCTGTTGACGAAGAAGCAATTGAACTTTGGAAAA
GTGAGACCTCAATTTCACACGATCATATTCTGAAATTTGGGAAAAAGGAT
AATTTTTGGGAAATGGGCGAAACAGGACCTTGTGGTCCTTGTTCTGAGTT
GCATATTGATCTTCGTTCGGATGAAGAACGTACAAAGGAAGATGGCGCTA
AACTAGTGAATATGGACGATCCGCGAGTTATGGAAATCTGGAACCTGGTC
TTCATTCAGTTTAATCGCCAATCTGATTCAACCCTCAAGACTTTGCCTGC
CCAACATGTAGATACAGGAATGGGATTTGAGCGTGTTTGTGCAGTTTTGC
AGGGCAAAACCTCCAATTATGATTGGGATGTCTTCACTCCATTATTGGAT
GAAATTTCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92899:2..760+

>mRNA_M-pyrifera_M_contig92899.21480.1 ID=mRNA_M-pyrifera_M_contig92899.21480.1|Name=mRNA_M-pyrifera_M_contig92899.21480.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1518bp|location=Sequence derived from alignment at M-pyrifera_M_contig92899:2..760+ (Macrocystis pyrifera P11B4 male)
GTAGATAGCGCACCCGTAGCGCCTAAAAATGATCCAACGCTTTTATTTAC
CAACGCAGGAATGAACCAGTTCAAGCCTATTTTTTTAGGAGAAGAAAAAG
CACTAAATCACGATGGTAAACTATGGAATCGTGCAGCCGATACCCAAAAA
TGTATTCGAGTTAGTGGAAAACATAACGATTTAGAAGAAGTTGGGCATGA
TACTTATCATCATACCCTATTCGAGATGCTTGGGAATTGGTCATTTGGAG
ATTATTTCAAGAAAGAAGCAATTGCTTGGGCTTGGGAATTATTGGTAGAC
CGTTGGGGTATGAATCCCGATCGATTATACGCTACGGTGTTTGGTGGTGA
TGAGGAAGATGGACTTCCTGTTGACGAAGAAGCAATTGAACTTTGGAAAA
GTGAGACCTCAATTTCACACGATCATATTCTGAAATTTGGGAAAAAGGAT
AATTTTTGGGAAATGGGCGAAACAGGACCTTGTGGTCCTTGTTCTGAGTT
GCATATTGATCTTCGTTCGGATGAAGAACGTACAAAGGAAGATGGCGCTA
AACTAGTGAATATGGACGATCCGCGAGTTATGGAAATCTGGAACCTGGTC
TTCATTCAGTTTAATCGCCAATCTGATTCAACCCTCAAGACTTTGCCTGC
CCAACATGTAGATACAGGAATGGGATTTGAGCGTGTTTGTGCAGTTTTGC
AGGGCAAAACCTCCAATTATGATTGGGATGTCTTCACTCCATTATTGGAT
GAAATTTCAGTAGATAGCGCACCCGTAGCGCCTAAAAATGATCCAACGCT
TTTATTTACCAACGCAGGAATGAACCAGTTCAAGCCTATTTTTTTAGGAG
AAGAAAAAGCACTAAATCACGATGGTAAACTATGGAATCGTGCAGCCGAT
ACCCAAAAATGTATTCGAGTTAGTGGAAAACATAACGATTTAGAAGAAGT
TGGGCATGATACTTATCATCATACCCTATTCGAGATGCTTGGGAATTGGT
CATTTGGAGATTATTTCAAGAAAGAAGCAATTGCTTGGGCTTGGGAATTA
TTGGTAGACCGTTGGGGTATGAATCCCGATCGATTATACGCTACGGTGTT
TGGTGGTGATGAGGAAGATGGACTTCCTGTTGACGAAGAAGCAATTGAAC
TTTGGAAAAGTGAGACCTCAATTTCACACGATCATATTCTGAAATTTGGG
AAAAAGGATAATTTTTGGGAAATGGGCGAAACAGGACCTTGTGGTCCTTG
TTCTGAGTTGCATATTGATCTTCGTTCGGATGAAGAACGTACAAAGGAAG
ATGGCGCTAAACTAGTGAATATGGACGATCCGCGAGTTATGGAAATCTGG
AACCTGGTCTTCATTCAGTTTAATCGCCAATCTGATTCAACCCTCAAGAC
TTTGCCTGCCCAACATGTAGATACAGGAATGGGATTTGAGCGTGTTTGTG
CAGTTTTGCAGGGCAAAACCTCCAATTATGATTGGGATGTCTTCACTCCA
TTATTGGATGAAATTTCA
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