mRNA_M-pyrifera_M_contig92859.21475.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92859.21475.1
Unique NamemRNA_M-pyrifera_M_contig92859.21475.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A6B1AXN9_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AXN9_9ACTN)

HSP 1 Score: 369 bits (946), Expect = 1.140e-123
Identity = 191/252 (75.79%), Postives = 215/252 (85.32%), Query Frame = 1
Query:    1 NGHVYFDLTEPSETPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRLAECE 756
            NGHVYFDL EP E PGAAPVAT+PVVLFR++RDRVNRLLKRHGDPIRMSDGV +RIQG VDYYPP  R+Q RMS+IDPTYTLG LAA +DAL+A LSA+G+LRAN    L  VPLRVGLVTSIGSAAHADI+TVF ++ +AFT+VEVDTPVQG GAE  V AAI AA D+  DV++VARGGGSKTDLA FDHE+VAR IA+  VPV+TG+GHDIDRSVADEVAHTATTTPTAAAQ VV RV +WL RL + E
Sbjct:   56 NGHVYFDLVEPGEGPGAAPVATMPVVLFRESRDRVNRLLKRHGDPIRMSDGVCVRIQGRVDYYPPSARVQLRMSSIDPTYTLGKLAASKDALLAELSAEGILRANAAQLLEPVPLRVGLVTSIGSAAHADISTVFEQAGMAFTVVEVDTPVQGSGAEVPVAAAIRAAEDADADVVLVARGGGSKTDLAVFDHEVVARAIASVGVPVVTGIGHDIDRSVADEVAHTATTTPTAAAQFVVGRVQQWLDRLGDHE 307          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A2D8LSQ6_9ACTN (Exodeoxyribonuclease 7 large subunit n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LSQ6_9ACTN)

HSP 1 Score: 352 bits (904), Expect = 2.830e-117
Identity = 184/252 (73.02%), Postives = 208/252 (82.54%), Query Frame = 1
Query:    1 NGHVYFDLTEPSETPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRLAECE 756
            +GHVYFDL E +ET GA PVA++PVVLFRD R+RVNRLLKRHGDPIRM+DGV+IRIQG VD+YPP GR+Q RMSAIDPTYTLG LAAER+AL+  LS  G+LRAN RH +PAVPLRVG+V+SIGSAAHADITTVF RSE AFTLVEVDT VQG GAE  + AAI AA ++ VDV++V RGGGSKTDLA FDH  VA  I    +PV TG+GHDID SVADEVAHTA TTPTAAAQ +VA V +WL RLA  E
Sbjct:   81 SGHVYFDLIESAETSGAPPVASMPVVLFRDARERVNRLLKRHGDPIRMTDGVKIRIQGTVDFYPPNGRLQLRMSAIDPTYTLGVLAAEREALLRRLSESGMLRANARHAVPAVPLRVGVVSSIGSAAHADITTVFERSERAFTLVEVDTAVQGAGAERSIAAAIRAAGEAGVDVVLVVRGGGSKTDLAVFDHADVADAIVHAPIPVFTGIGHDIDHSVADEVAHTAHTTPTAAAQAIVAVVDDWLARLASRE 332          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A7K2A1Z5_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A1Z5_9ACTN)

HSP 1 Score: 285 bits (729), Expect = 6.580e-91
Identity = 149/250 (59.60%), Postives = 191/250 (76.40%), Query Frame = 1
Query:    1 NGHVYFDLTEPSE--TPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRL 744
            +GHVYF+L E +E   PGA PVA++ VVLFRD+++RVN  +KRHG+ IRM DGV +RIQG++D+YP +G++Q RM AIDP +TLG LAA+RDAL+ AL+A+G LR N    L  VPLRVG+VTS+ SAAHAD+  V A S  AF +VE+ TPVQG+ A   + AA+ AA D+  DV+++ARGGGS+TDL  FDHE+VAR IA  + PV TG+GH+ DRSVADE AHTA +TPTAAA+ VV RV  WL +L
Sbjct:   46 SGHVYFELVERAERAAPGAPPVASLNVVLFRDDKERVNATIKRHGNAIRMEDGVSVRIQGMLDFYPQRGQLQLRMIAIDPAHTLGALAADRDALLRALAAEGTLRRNADVALEPVPLRVGIVTSLDSAAHADMLRVLAGSGFAFQVVEIHTPVQGVDAPAAIAAAVRAAVDAASDVVVLARGGGSRTDLVAFDHELVARAIAMCERPVFTGIGHETDRSVADETAHTACSTPTAAARAVVQRVEGWLEQL 295          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A6N9EUD9_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EUD9_9ACTN)

HSP 1 Score: 285 bits (728), Expect = 9.310e-91
Identity = 153/250 (61.20%), Postives = 190/250 (76.00%), Query Frame = 1
Query:    1 NGHVYFDLTEPSE--TPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRL 744
            +GHVYFDL E SE   PGA PVA+V VVLFRD+++RVN ++K+HGD IRM D V +RIQG+ D+Y P+G++Q RM +IDP +TLG LAAER+AL+ AL+A+G+L  N    L  VPLRVGLVTS GSAAHAD+  VFA S  AF + E+DT VQG  A   + AAI   AD+ VDV+++ARGGGS+TDL  FDHE+VAR IA  + PV TG+GH+IDRSVADE AHTA +TPTAAA+ VV RV  WL +L
Sbjct:   46 SGHVYFDLVERSEHAKPGAPPVASVSVVLFRDDKERVNTVIKQHGDAIRMVDRVSVRIQGMPDFYAPRGQLQLRMISIDPAHTLGALAAEREALLKALAAEGILSRNAGVALAPVPLRVGLVTSAGSAAHADMLKVFATSGFAFQVFEIDTRVQGADAPAEIAAAIGTVADADVDVVVLARGGGSRTDLVAFDHELVARAIAMCERPVFTGIGHEIDRSVADETAHTACSTPTAAARAVVQRVECWLEQL 295          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A7K2DCX2_9ACTN (Exodeoxyribonuclease 7 large subunit n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DCX2_9ACTN)

HSP 1 Score: 284 bits (726), Expect = 1.860e-90
Identity = 154/250 (61.60%), Postives = 191/250 (76.40%), Query Frame = 1
Query:    1 NGHVYFDLTEPSE--TPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRL 744
            +GHVYFDL E SE   PGA PVA+V VVLFRD+++RVN ++K+HGD IRM D V +RIQG+ D+Y P+G++Q RM +IDP +TLG LAAER+A++ AL+A+G+L  N    L  VPLRVGLVTS GSAAHAD+  VFA S  AF + E+DT VQG  A   V AAI AAA + VDV+++ARGGGS+TDL  FDHE+VAR IA  + PV TG+GH+IDRSVADE AHTA +TPTAAA+ VV RV  WL +L
Sbjct:   46 SGHVYFDLVERSEHAKPGAPPVASVSVVLFRDDKERVNTVIKQHGDAIRMVDRVSVRIQGMPDFYAPRGQLQLRMISIDPAHTLGALAAEREAMLKALAAEGILSRNTGVALAPVPLRVGLVTSAGSAAHADMLKVFATSGFAFKVFEIDTRVQGPDAPAEVAAAIGAAAGAGVDVVVLARGGGSRTDLVAFDHELVARAIAMCERPVFTGIGHEIDRSVADETAHTACSTPTAAARAVVQRVEGWLEQL 295          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A6B1E502_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E502_9ACTN)

HSP 1 Score: 280 bits (717), Expect = 4.200e-89
Identity = 145/250 (58.00%), Postives = 191/250 (76.40%), Query Frame = 1
Query:    1 NGHVYFDLTEPSET--PGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRL 744
            +GHVYFDL E  +   PGA P+A+V VVLFRD+++RVN  +K HG+ IRM++GV++R+QG++D+YP +G++Q RM AIDP +TLG LAA+R+AL+ AL+ + +LR N    L  VPLRVGLVTS+ SAAHAD+  VF+ S  AF + E+DTPVQG  A   + AAI A A + VDV+++ARGGGS+TDL  FDHE+VAR +A  + PV TG+GH+ DRSVADE AHTA +TPTAAA+ VV RV +WL RL
Sbjct:   46 SGHVYFDLVERPQRAEPGAPPIASVSVVLFRDDKERVNATIKGHGNTIRMANGVKVRVQGMLDFYPRRGQLQLRMIAIDPAHTLGALAADREALLKALATEQILRRNAGVALAPVPLRVGLVTSVDSAAHADMLKVFSTSGFAFQVFEIDTPVQGADAPAEIAAAIGAVAGAGVDVVVLARGGGSRTDLVAFDHELVARAVAMCERPVFTGIGHETDRSVADETAHTACSTPTAAARAVVQRVEDWLERL 295          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A3M2H0B2_ACTSX (Exodeoxyribonuclease 7 large subunit n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H0B2_ACTSX)

HSP 1 Score: 263 bits (671), Expect = 3.140e-82
Identity = 143/248 (57.66%), Postives = 177/248 (71.37%), Query Frame = 1
Query:    1 NGHVYFDLTEPSETPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRL 744
            NG  +FDL EP+   G APVA V VVLF D R RVN LL+RHG  ++M DGVRIRIQ  V +Y PQGR+Q RM+ IDP+YT+  LAA+++A++  L A+GL   N R PLP +P RVGLVT+  SAA AD+  VFA +    TLVE D  VQG  A   +VAA+ A   + VD+++V RGGG++TDLA FDHE VAR IAA  VPV+TG+GH+ID SVAD VAHTA  TPTAAA+ VV+ +AE  GRL
Sbjct:   40 NGMRWFDLVEPAPEAGRAPVARVAVVLFDDARRRVNALLRRHGGAVKMGDGVRIRIQAAVAFYAPQGRLQLRMTTIDPSYTIARLAADKEAVLRRLRAEGLTELNRRLPLPVLPGRVGLVTARDSAAAADVHRVFANAGYGVTLVECDALVQGADAPRSLVAALDAVTAADVDLVLVVRGGGARTDLAAFDHETVARAIAACPVPVVTGIGHEIDESVADLVAHTARATPTAAAEFVVSVIAEARGRL 287          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A8F4J3Q2_9ACTN (Exodeoxyribonuclease 7 large subunit n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J3Q2_9ACTN)

HSP 1 Score: 251 bits (641), Expect = 7.380e-78
Identity = 137/250 (54.80%), Postives = 172/250 (68.80%), Query Frame = 1
Query:    1 NGHVYFDLTEPSETPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRLAE 750
            NGH YFDL EP+   G  P A V V L    R  VN  LKR G  +RM DG+ +RIQG + +Y P+G +Q RMS IDP +TLG L A+RD ++AAL+ADGL+ ANGR P+P VPLRVGLVTS+GSAAHAD+ +    S LAF +   D   QG  A   VV A+   A   VDVI++ RGGG++TDLA FD ++VAR IAA  VPV TG+GH++DRS+ADE+AH+A  TPTAAA  VV+ V  +L R+ E
Sbjct:   53 NGHAYFDLAEPTAA-GEQPRAQVSVTLLAPERKHVNEQLKRAGGAVRMDDGIEVRIQGRLRWYAPRGTLQLRMSGIDPAFTLGRLQADRDRILAALAADGLVEANGRLPVPLVPLRVGLVTSVGSAAHADVLSELTGSGLAFVVRTADARTQGPDAARSVVHALHRVARDGVDVILLVRGGGARTDLAGFDTDLVARAIAAMPVPVFTGIGHEVDRSIADELAHSAHKTPTAAAAAVVSLVRAFLDRVDE 301          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: A0A3D5K5S2_9ACTN (Exodeoxyribonuclease 7 large subunit n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K5S2_9ACTN)

HSP 1 Score: 243 bits (621), Expect = 2.930e-75
Identity = 130/241 (53.94%), Postives = 168/241 (69.71%), Query Frame = 1
Query:    1 NGHVYFDLTEPSETPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARV 723
            +GH YFDL EPSE PG A  A + V LF+  R  V+R L   G  + ++D +++RI+  +D+YPP GR+Q +M  +DPT+TLG LAAERD L+ AL+ +GLLRAN  +P+P  PLR+GLVTS+GSAAHAD T   ARS L F ++E D  VQG GA   +  A+   A  R DVI + RGGGS  DL  FD E++ARTIA  D PV+TG+GH++DR+VADEVAHTA  TPTA A  +V +V
Sbjct:   46 SGHAYFDLVEPSEVPGRAVAAKLSVALFKGPRVGVDRTLAAAGG-LALADDLQLRIRARIDFYPPNGRLQLKMDGVDPTFTLGRLAAERDQLLRALTDEGLLRANRANPVPIPPLRIGLVTSLGSAAHADFTDELARSGLPFEVLERDARVQGDGAAMDLAEALAVLATHRPDVIALVRGGGSAADLIVFDAEVLARTIAGLDTPVMTGIGHEVDRAVADEVAHTAMKTPTACAAALVEQV 285          
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Match: UPI001E5E7F7D (exodeoxyribonuclease VII large subunit n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E5E7F7D)

HSP 1 Score: 241 bits (615), Expect = 8.120e-74
Identity = 136/241 (56.43%), Postives = 170/241 (70.54%), Query Frame = 1
Query:    4 GHVYFDLTE-PSETPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSDGVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADGLLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTPVQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIAATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARV 723
            GHVYFDL E P++  GAAP A VPVVL+   RDRVN  L+R G  IR+ DGVRIRI G ++ Y P+GR+Q +M  IDPTYTLG LA+ERD ++  L  +GLL  N R  +P +PLRVGLVT+ GSAA AD       S LA+ ++ VD  VQG+GA   V AA+  AA   VDV+ + RGGG++TDLATFDHE+VAR IA  DVPV+TG+GH+ D+S+AD VAH +  TPTA A  +VA V
Sbjct:   42 GHVYFDLVERPAD--GAAPTAAVPVVLWSSVRDRVNLHLRRAGS-IRIEDGVRIRISGRLELYEPKGRLQVQMQGIDPTYTLGLLASERDRVLQVLETEGLLHRNRRMEIPPLPLRVGLVTAAGSAAEADALQTLTDSGLAWRVLHVDARVQGVGAAEQVAAALRTAAAWGVDVVALVRGGGARTDLATFDHEVVARAIATLDVPVVTGIGHETDQSLADLVAHLSERTPTACAAALVAHV 279          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92859.21475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B1AXN9_9ACTN1.140e-12375.79Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidi... [more]
A0A2D8LSQ6_9ACTN2.830e-11773.02Exodeoxyribonuclease 7 large subunit n=7 Tax=Acidi... [more]
A0A7K2A1Z5_9ACTN6.580e-9159.60Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidi... [more]
A0A6N9EUD9_9ACTN9.310e-9161.20Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidi... [more]
A0A7K2DCX2_9ACTN1.860e-9061.60Exodeoxyribonuclease 7 large subunit n=5 Tax=Acidi... [more]
A0A6B1E502_9ACTN4.200e-8958.00Exodeoxyribonuclease 7 large subunit n=1 Tax=Acidi... [more]
A0A3M2H0B2_ACTSX3.140e-8257.66Exodeoxyribonuclease 7 large subunit n=1 Tax=Actin... [more]
A0A8F4J3Q2_9ACTN7.380e-7854.80Exodeoxyribonuclease 7 large subunit n=1 Tax=Aquih... [more]
A0A3D5K5S2_9ACTN2.930e-7553.94Exodeoxyribonuclease 7 large subunit n=2 Tax=Acidi... [more]
UPI001E5E7F7D8.120e-7456.43exodeoxyribonuclease VII large subunit n=1 Tax=Rha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92859contigM-pyrifera_M_contig92859:2..757 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score213.0
Seed ortholog evalue1.6e-52
Seed eggNOG ortholog1229780.BN381_70073
Preferred namexseA
KEGG koko:K03601
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
EggNOG OGs2GJAS@201174,3UWFU@52018,COG1570@1,COG1570@2
EC3.1.11.6
COG Functional cat.L
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons1
Model size756
Cds size756
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816841.588132-CDS-M-pyrifera_M_contig92859:1..7571622816841.588132-CDS-M-pyrifera_M_contig92859:1..757Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92859 2..757 +
1692278210.014588-CDS-M-pyrifera_M_contig92859:1..7571692278210.014588-CDS-M-pyrifera_M_contig92859:1..757Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92859 2..757 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92859.21475.1prot_M-pyrifera_M_contig92859.21475.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92859 2..757 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92859.21475.1

>prot_M-pyrifera_M_contig92859.21475.1 ID=prot_M-pyrifera_M_contig92859.21475.1|Name=mRNA_M-pyrifera_M_contig92859.21475.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
NGHVYFDLTEPSETPGAAPVATVPVVLFRDNRDRVNRLLKRHGDPIRMSD
GVRIRIQGVVDYYPPQGRIQFRMSAIDPTYTLGHLAAERDALMAALSADG
LLRANGRHPLPAVPLRVGLVTSIGSAAHADITTVFARSELAFTLVEVDTP
VQGLGAEHGVVAAITAAADSRVDVIIVARGGGSKTDLATFDHEIVARTIA
ATDVPVITGVGHDIDRSVADEVAHTATTTPTAAAQLVVARVAEWLGRLAE
CE
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mRNA from alignment at M-pyrifera_M_contig92859:2..757+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92859.21475.1 ID=mRNA_M-pyrifera_M_contig92859.21475.1|Name=mRNA_M-pyrifera_M_contig92859.21475.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig92859:2..757+ (Macrocystis pyrifera P11B4 male)
AACGGCCACGTCTACTTCGACCTCACCGAACCGAGCGAGACCCCCGGAGC CGCGCCGGTGGCCACCGTGCCGGTCGTGCTGTTCCGCGACAATCGCGACC GGGTCAATCGGCTGCTGAAACGCCACGGCGACCCCATCAGGATGAGCGAC GGTGTGCGCATCCGTATCCAGGGCGTTGTCGACTACTACCCGCCGCAGGG ACGCATCCAGTTCCGCATGTCGGCCATCGACCCCACCTACACACTCGGCC ATCTGGCCGCCGAGCGCGACGCGCTGATGGCGGCGCTGTCGGCCGACGGC CTGTTGCGGGCCAACGGCCGCCACCCGCTGCCGGCCGTCCCGCTGCGGGT GGGCCTGGTCACCTCGATCGGCAGCGCCGCCCACGCCGACATCACCACCG TCTTCGCCCGCAGCGAGCTGGCGTTCACCCTCGTCGAAGTCGACACCCCG GTGCAGGGGCTGGGTGCCGAACACGGCGTGGTCGCCGCCATCACCGCGGC GGCGGATTCACGAGTCGACGTCATCATCGTCGCTCGCGGTGGCGGCTCGA AGACCGATCTCGCCACGTTCGACCACGAGATCGTGGCCCGGACGATCGCC GCCACCGACGTGCCGGTCATCACCGGGGTCGGCCACGACATCGACCGCAG CGTCGCCGACGAAGTCGCCCACACCGCCACCACCACACCCACCGCCGCAG CCCAGCTCGTGGTGGCCAGGGTGGCCGAGTGGTTGGGGCGCCTGGCCGAG TGCGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92859:2..757+

>mRNA_M-pyrifera_M_contig92859.21475.1 ID=mRNA_M-pyrifera_M_contig92859.21475.1|Name=mRNA_M-pyrifera_M_contig92859.21475.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1512bp|location=Sequence derived from alignment at M-pyrifera_M_contig92859:2..757+ (Macrocystis pyrifera P11B4 male)
AACGGCCACGTCTACTTCGACCTCACCGAACCGAGCGAGACCCCCGGAGC
CGCGCCGGTGGCCACCGTGCCGGTCGTGCTGTTCCGCGACAATCGCGACC
GGGTCAATCGGCTGCTGAAACGCCACGGCGACCCCATCAGGATGAGCGAC
GGTGTGCGCATCCGTATCCAGGGCGTTGTCGACTACTACCCGCCGCAGGG
ACGCATCCAGTTCCGCATGTCGGCCATCGACCCCACCTACACACTCGGCC
ATCTGGCCGCCGAGCGCGACGCGCTGATGGCGGCGCTGTCGGCCGACGGC
CTGTTGCGGGCCAACGGCCGCCACCCGCTGCCGGCCGTCCCGCTGCGGGT
GGGCCTGGTCACCTCGATCGGCAGCGCCGCCCACGCCGACATCACCACCG
TCTTCGCCCGCAGCGAGCTGGCGTTCACCCTCGTCGAAGTCGACACCCCG
GTGCAGGGGCTGGGTGCCGAACACGGCGTGGTCGCCGCCATCACCGCGGC
GGCGGATTCACGAGTCGACGTCATCATCGTCGCTCGCGGTGGCGGCTCGA
AGACCGATCTCGCCACGTTCGACCACGAGATCGTGGCCCGGACGATCGCC
GCCACCGACGTGCCGGTCATCACCGGGGTCGGCCACGACATCGACCGCAG
CGTCGCCGACGAAGTCGCCCACACCGCCACCACCACACCCACCGCCGCAG
CCCAGCTCGTGGTGGCCAGGGTGGCCGAGTGGTTGGGGCGCCTGGCCGAG
TGCGAAAACGGCCACGTCTACTTCGACCTCACCGAACCGAGCGAGACCCC
CGGAGCCGCGCCGGTGGCCACCGTGCCGGTCGTGCTGTTCCGCGACAATC
GCGACCGGGTCAATCGGCTGCTGAAACGCCACGGCGACCCCATCAGGATG
AGCGACGGTGTGCGCATCCGTATCCAGGGCGTTGTCGACTACTACCCGCC
GCAGGGACGCATCCAGTTCCGCATGTCGGCCATCGACCCCACCTACACAC
TCGGCCATCTGGCCGCCGAGCGCGACGCGCTGATGGCGGCGCTGTCGGCC
GACGGCCTGTTGCGGGCCAACGGCCGCCACCCGCTGCCGGCCGTCCCGCT
GCGGGTGGGCCTGGTCACCTCGATCGGCAGCGCCGCCCACGCCGACATCA
CCACCGTCTTCGCCCGCAGCGAGCTGGCGTTCACCCTCGTCGAAGTCGAC
ACCCCGGTGCAGGGGCTGGGTGCCGAACACGGCGTGGTCGCCGCCATCAC
CGCGGCGGCGGATTCACGAGTCGACGTCATCATCGTCGCTCGCGGTGGCG
GCTCGAAGACCGATCTCGCCACGTTCGACCACGAGATCGTGGCCCGGACG
ATCGCCGCCACCGACGTGCCGGTCATCACCGGGGTCGGCCACGACATCGA
CCGCAGCGTCGCCGACGAAGTCGCCCACACCGCCACCACCACACCCACCG
CCGCAGCCCAGCTCGTGGTGGCCAGGGTGGCCGAGTGGTTGGGGCGCCTG
GCCGAGTGCGAA
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