mRNA_M-pyrifera_M_contig92846.21471.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: A0A354GW15_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GW15_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 4.370e-15 Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 244 ATETFDDLRLASRRYFAKQLSGLSAPEQLTFLQTQDEGHFHNSLSLGLQHREELGMSDRSAAWLLNGKAVAQESLSERIRLARESDDPAMAQQLEALASLRSQLARLSLKRPEAWVELDNVRKRLPTGSLLVDIA 648 A + D R RRY A L+ LS +QL +L +D FH + S+ L RE+ + SA W+LNGKAVAQESL++R+ A ++ D A A L A+ S R E WVEL +RK LP ++L++I+ Sbjct: 319 AAQAADQERRVVRRYVANALAVLSEKDQLAYLDHRDAKQFHIAESIALNRREDAAPAALSAGWVLNGKAVAQESLAQRVLAALDARDLA--------AHLGKTSAQSS--RAEPWVELAEIRKALPADAVLIEIS 443
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: A0A354H169_9BACT (CHAT domain-containing protein n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354H169_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 5.220e-15 Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 244 ATETFDDLRLASRRYFAKQLSGLSAPEQLTFLQTQDEGHFHNSLSLGLQHREELGMSDRSAAWLLNGKAVAQESLSERIRLARESDDPAMAQQLEALASLRSQLARLSLKRPEAWVELDNVRKRLPTGSLLVDIA 648 A + D R RR+ + L LS EQL FL+ +D FH + SL L RE+ + +SA WLLNGKAVAQE+L++R+ A ++ D A R A R E WVEL VRK LP ++L++I+ Sbjct: 265 AADAADQERRIVRRHVTRVLPVLSEKEQLAFLEHKDAVFFHVAESLALSRREDATTAAQSAGWLLNGKAVAQEALAQRVLAALDARDHAA----------RLGKASAPSSRAEPWVELAEVRKALPADAVLIEIS 389
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: A0A354H164_9BACT (CHAT domain-containing protein (Fragment) n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354H164_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 1.630e-14 Identity = 57/137 (41.61%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 238 TAATETFDDLRLASRRYFAKQLSGLSAPEQLTFLQTQDEGHFHNSLSLGLQHREELGMSDRSAAWLLNGKAVAQESLSERIRLARESDDPAMAQQLEALASLRSQLARLSLKRPEAWVELDNVRKRLPTGSLLVDIA 648 T A + D R R + + L LS EQL FL+ D +FH + SL L REE + SA WLLNGKAVAQE+L++R+ A ++ D A A L A S R E WVEL VRK LP ++L++I+ Sbjct: 305 TEALKPADQERRIVRHHVTRVLPVLSEKEQLAFLEHNDARNFHVAESLALSRREEAATAALSAGWLLNGKAVAQEALAQRVLAALDARDFA--------ARLGKTSAPSS--RAEPWVELAEVRKTLPADAVLIEIS 431
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: A0A7C4V6T2_9BACT (CHAT domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4V6T2_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 6.200e-14 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 268 RLASRRYFAKQLSGLSAPEQLTFLQTQDEGHFHNSLSLGLQHREELGMSDRSAAWLLNGKAVAQESLSERIRLARESDDPAMAQQLEALASLRSQLARLS 567 R SRR+ A+ L L+ EQL FL + E H +LSL L G++ SA+W+LNGKA+AQE+L+E LAR+S DPA+A+ L+ L ++R +LA S Sbjct: 403 RRISRRHVARTLPVLAESEQLRFLTQKHEPELHQALSLALSKDAAPGLTSLSASWILNGKAIAQEALAESSLLARDSADPALAEDLKQLTAVRRKLANRS 502
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: A0A517YGY4_9BACT (Photosystem I assembly protein Ycf3 n=2 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YGY4_9BACT) HSP 1 Score: 68.2 bits (165), Expect = 1.050e-9 Identity = 50/163 (30.67%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 259 DDLRLASRRYFAKQLSGLSAPEQLTFLQTQDEGHFHNSLSLGLQHREELGMSDRSAAWLLNGKAVAQESLSERIRLARESDDPAMAQQLEALASLRSQLARLSLKRPEA---------------------------------WVELDNVRKRLPTGSLLVDIA 648 D R A R + + L GLS EQL FL+ + +HNSLS G R +S+ SAAWL+NGK +++ESL+ I+L + P A + L +LR +LA + +++P++ WV++ +RK +P ++LV+ A Sbjct: 543 DQARRAIRFHEVRTLPGLSEAEQLAFLRNMHDKDWHNSLSWGRSERTTSRISEISAAWLVNGKGISEESLATGIQL----EKPETAALVAQLRTLRGKLADI-VRQPQSDERDRRQAELAAEQQRLVRLLGQARGEDLTSDPWVDIAGIRKAIPAKTMLVNTA 700
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: A0A517YGT5_9BACT (Photosystem I assembly protein Ycf3 n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YGT5_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 3.900e-8 Identity = 48/161 (29.81%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 247 TETFDDLRLASRRYFAKQLSGLSAPEQLTFLQTQDEGHFHNSLSLGLQHREELGMSDRSAAWLLNGKAVAQESLSERI-------------------RLARESDDP---AMAQQLEALASLRSQLARLSLKRP------EAWVELDNVRKRLPTGSLLVDI 645 T D+ R A R + + L G+S EQLT+L+T + ++H SLS G + SAAWL+NGK + +ESL+ + L D P A ++ E L + + +L RL + E WV+++ VR+ +P ++LV+I Sbjct: 453 TNYLDESRRAIRIHEVQVLQGISEAEQLTYLRTNHDENWHESLSFGRSQLTRSRAVELSAAWLINGKGITEESLATAVYFETAQINVHLDELRTIRGNLTEIGDKPKSEARDRRKEQLEAEQQRLVRLIDQARAEGLSIETWVDIEGVRRSIPAKAMLVNI 613
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: A0A2D5GRG8_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2D5GRG8_9PLAN) HSP 1 Score: 63.5 bits (153), Expect = 4.050e-8 Identity = 51/190 (26.84%), Postives = 82/190 (43.16%), Query Frame = 1 Query: 1 LYEQTLELRRKVLGEEHPHTLDSMHNLANALSKLGDNATARTLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAATETFDDLRLASRRYFAKQLSGLSAPEQLTFLQTQDEGHFHNSLSLGLQHREELGMSDRSAAWLLNGKAVAQESLSERIRLARESDDPAMAQQLEALASLRSQLARLSL 570 L +++ + + LG+EHP TL + LAN G+ A A L AA FD+ R ++R+ K L+GL+ EQL FL+ D+ + + + R ++++ W+LN KA+ QE+LS RL R+ A E L +R QLA +++ Sbjct: 367 LVKESFAIAHRTLGDEHPQTLGIKYRLANYEYNDGNYAIAVQLLGEIISTRKRLFHDQNRQLGSALGFLGTIEAIQGNWVAAARAFDEQRRGAKRFSDKVLTGLNQREQLRFLKGIDQVDYRRATGIMWPQRNNPQVAEKHLEWILNRKALVQETLSSHERLLRQFQGAARVF-AENLFEVRRQLASITI 555
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Match: UPI001C658DBB (tetratricopeptide repeat protein n=1 Tax=Micromonospora saelicesensis TaxID=285676 RepID=UPI001C658DBB) HSP 1 Score: 52.8 bits (125), Expect = 5.210e-6 Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 1 Query: 16 LELRRKVLGEEHPHTLDSMHNLANALSKLGDNATARTLH 132 ++LRR+VLGEEH HTL SM+NLA LS++G+ AR LH Sbjct: 1 MQLRRRVLGEEHRHTLTSMNNLAGMLSRMGELTEARRLH 39 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92846.21471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92846.21471.1 >prot_M-pyrifera_M_contig92846.21471.1 ID=prot_M-pyrifera_M_contig92846.21471.1|Name=mRNA_M-pyrifera_M_contig92846.21471.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp LYEQTLELRRKVLGEEHPHTLDSMHNLANALSKLGDNATARTLHEQTLALback to top mRNA from alignment at M-pyrifera_M_contig92846:2..757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92846.21471.1 ID=mRNA_M-pyrifera_M_contig92846.21471.1|Name=mRNA_M-pyrifera_M_contig92846.21471.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig92846:2..757- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92846:2..757- >mRNA_M-pyrifera_M_contig92846.21471.1 ID=mRNA_M-pyrifera_M_contig92846.21471.1|Name=mRNA_M-pyrifera_M_contig92846.21471.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig92846:2..757- (Macrocystis pyrifera P11B4 male)back to top |