mRNA_M-pyrifera_M_contig92830.21468.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92830.21468.1
Unique NamemRNA_M-pyrifera_M_contig92830.21468.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: A0A6V7GXA5_9HYME (Hypothetical protein (Fragment) n=1 Tax=Heterotrigona itama TaxID=395501 RepID=A0A6V7GXA5_9HYME)

HSP 1 Score: 128 bits (322), Expect = 3.310e-31
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  535 GEIVGGLAVLTGEPSFYTIRAKHSSR------IALLSKSTFFAIMREQPTVVLHVAHSVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKEIVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 704          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: V9IBX3_APICE (Neuropathy target esterase sws n=1 Tax=Apis cerana TaxID=7461 RepID=V9IBX3_APICE)

HSP 1 Score: 127 bits (320), Expect = 5.970e-31
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  537 GEIVGGLAVLTGEPSFYTIRAKHSSR------IALLSKSTFFAIMREQPTVVLHVAHSVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 706          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: UPI001CB68ECF (neuropathy target esterase sws isoform X6 n=1 Tax=Frieseomelitta varia TaxID=561572 RepID=UPI001CB68ECF)

HSP 1 Score: 127 bits (320), Expect = 6.030e-31
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  545 GEIVGGLAVLTGEPSFYTIRAKHSSR------IALLSKSTFFAIMREQPTVVLHVAHSVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 714          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: A0A833W314_9HYME (Neuropathy target esterase sws n=2 Tax=Frieseomelitta varia TaxID=561572 RepID=A0A833W314_9HYME)

HSP 1 Score: 127 bits (320), Expect = 6.050e-31
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  554 GEIVGGLAVLTGEPSFYTIRAKHSSR------IALLSKSTFFAIMREQPTVVLHVAHSVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 723          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: UPI001CB6930C (neuropathy target esterase sws isoform X5 n=1 Tax=Frieseomelitta varia TaxID=561572 RepID=UPI001CB6930C)

HSP 1 Score: 127 bits (320), Expect = 6.060e-31
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  545 GEIVGGLAVLTGEPSFYTIRAKHSSR------IALLSKSTFFAIMREQPTVVLHVAHSVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 714          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: UPI001CB6A6A7 (neuropathy target esterase sws isoform X4 n=1 Tax=Frieseomelitta varia TaxID=561572 RepID=UPI001CB6A6A7)

HSP 1 Score: 127 bits (320), Expect = 6.150e-31
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  545 GEIVGGLAVLTGEPSFYTIRAKHSSR------IALLSKSTFFAIMREQPTVVLHVAHSVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 714          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: A0A0M9A8F9_9HYME (Neuropathy target esterase sws n=8 Tax=Apinae TaxID=70987 RepID=A0A0M9A8F9_9HYME)

HSP 1 Score: 127 bits (320), Expect = 6.210e-31
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  642 GEIVGGLAVLTGEPSFYTIRAKHSSR------IALLSKSTFFAIMREQPTVVLHVAHSVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 811          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: A0A6J8B591_MYTCO (NTE n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B591_MYTCO)

HSP 1 Score: 127 bits (319), Expect = 8.290e-31
Identity = 65/175 (37.14%), Postives = 110/175 (62.86%), Query Frame = 1
Query:    4 GDTVGQLAVVTGDFYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAKR---QGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +        R    T++  + K  F +++ ++P+V+    +   +++AP V+ +DFALDW   +AG+ + RQ D +D +Y++L+GRLR+ R    G  ++VAEYG+GE  G +EVLTD  R +T++AVRDTE A + + +   + +KYPQ+V +   ++G
Sbjct:  424 GEIVGSLAVLTGEPSFFTM-----RAKVDTIVVTISKVEFYSIMREQPSVVLNVAHTTAVRIAPFVRQIDFALDWMMIEAGKALFRQGDQSDSVYIILTGRLRSVRTHHNGKKSLVAEYGRGELVGIVEVLTDTARTTTIMAVRDTECAHLPADLLNLIKRKYPQIVTRLIHLLG 593          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: A0A6V7IUU6_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7IUU6_9HYME)

HSP 1 Score: 119 bits (298), Expect = 8.670e-31
Identity = 66/168 (39.29%), Postives = 102/168 (60.71%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRA---KRQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVV 495
            G+  G LAV+TG+  +Y ++ +   R      +  L K  F +++ + PTV+      +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+      G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV
Sbjct:   25 GEVEGGLAVLTGEPSFYTIRAKHASR------IALLNKQTFFSIMREMPTVVLHVANTVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITHPNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVV 186          
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Match: UPI000718BEE9 (neuropathy target esterase sws isoform X4 n=3 Tax=Vespidae TaxID=7438 RepID=UPI000718BEE9)

HSP 1 Score: 127 bits (318), Expect = 1.120e-30
Identity = 69/176 (39.20%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    4 GDTVGQLAVVTGD-FYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPTVIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLSGRLRAK---RQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKISSTMFKFVIKKYPQVVVQFSKIVG 519
            G+ VG LAV+TG+  +Y ++ +   R      +  L K  F A++ ++PTV+    + +  +L+P V+ VDFALDW   ++G  V RQ D +D  ++VLSGRLR+    + G   +VAEYGKG+  G +E++T  PR++TV+AVRD+ELAK+   +F  +  +YP VV +   ++G
Sbjct:  544 GEIVGGLAVLTGEPSFYTIRAKHPSR------IALLSKSTFFAIMREQPTVVLHVAHTVVRRLSPFVRQVDFALDWLFLESGRAVYRQGDESDSTFIVLSGRLRSVITYKNGKKELVAEYGKGDLVGIVEMVTQTPRSTTVMAVRDSELAKLPEGLFNVIKLRYPIVVTRLINLLG 713          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92830.21468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V7GXA5_9HYME3.310e-3139.20Hypothetical protein (Fragment) n=1 Tax=Heterotrig... [more]
V9IBX3_APICE5.970e-3139.20Neuropathy target esterase sws n=1 Tax=Apis cerana... [more]
UPI001CB68ECF6.030e-3139.20neuropathy target esterase sws isoform X6 n=1 Tax=... [more]
A0A833W314_9HYME6.050e-3139.20Neuropathy target esterase sws n=2 Tax=Frieseomeli... [more]
UPI001CB6930C6.060e-3139.20neuropathy target esterase sws isoform X5 n=1 Tax=... [more]
UPI001CB6A6A76.150e-3139.20neuropathy target esterase sws isoform X4 n=1 Tax=... [more]
A0A0M9A8F9_9HYME6.210e-3139.20Neuropathy target esterase sws n=8 Tax=Apinae TaxI... [more]
A0A6J8B591_MYTCO8.290e-3137.14NTE n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A... [more]
A0A6V7IUU6_9HYME8.670e-3139.29Uncharacterized protein (Fragment) n=1 Tax=Bracon ... [more]
UPI000718BEE91.120e-3039.20neuropathy target esterase sws isoform X4 n=3 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92830contigM-pyrifera_M_contig92830:41..757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score127.5
Seed ortholog evalue6.1e-27
Seed eggNOG ortholog69319.XP_008556860.1
Preferred namesws
KEGG rclassRC00020,RC00037,RC00041,RC00094
KEGG koko:K14676
KEGG ReactionR02746,R02747,R03416,R03417
KEGG Pathwayko00564,map00564
Hectar predicted targeting categoryother localisation
GOsGO:0001894,GO:0001895,GO:0001932,GO:0001933,GO:0003008,GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006469,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007272,GO:0007275,GO:0007399,GO:0007600,GO:0007606,GO:0007608,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009892,GO:0009987,GO:0010563,GO:0010605,GO:0012501,GO:0012505,GO:0016020,GO:0016043,GO:0016298,GO:0016787,GO:0016788,GO:0019220,GO:0019222,GO:0019637,GO:0019899,GO:0019900,GO:0019901,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031984,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0033036,GO:0033673,GO:0034236,GO:0034349,GO:0034613,GO:0042175,GO:0042325,GO:0042326,GO:0042592,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043549,GO:0044092,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045494,GO:0045859,GO:0045936,GO:0046470,GO:0046486,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0048871,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0051018,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051402,GO:0051641,GO:0052689,GO:0060249,GO:0060255,GO:0061024,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070997,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0071944,GO:0072657,GO:0080090,GO:0097164,GO:0098827,GO:1901564,GO:2000479,GO:2000480
EggNOG free text desc.Patatin-like phospholipase
EggNOG OGs38ERP@33154,3BAG1@33208,3CVZD@33213,3SI8D@50557,41YH9@6656,46HZE@7399,COG0664@1,KOG2968@2759
EC3.1.1.5
COG Functional cat.I
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size519
Cds size519
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816841.306542-CDS-M-pyrifera_M_contig92830:40..2451622816841.306542-CDS-M-pyrifera_M_contig92830:40..245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92830 41..245 -
1692278209.904992-CDS-M-pyrifera_M_contig92830:40..2451692278209.904992-CDS-M-pyrifera_M_contig92830:40..245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92830 41..245 -
1622816841.3216813-CDS-M-pyrifera_M_contig92830:443..7571622816841.3216813-CDS-M-pyrifera_M_contig92830:443..757Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92830 444..757 -
1692278209.9215436-CDS-M-pyrifera_M_contig92830:443..7571692278209.9215436-CDS-M-pyrifera_M_contig92830:443..757Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92830 444..757 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92830.21468.1prot_M-pyrifera_M_contig92830.21468.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92830 41..757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92830.21468.1

>prot_M-pyrifera_M_contig92830.21468.1 ID=prot_M-pyrifera_M_contig92830.21468.1|Name=mRNA_M-pyrifera_M_contig92830.21468.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp
AGDTVGQLAVVTGDFYYRVQTREGGRPDAATVLGKLRKDAFDALVAKRPT
VIGRTIYMIYLQLAPVVKHVDFALDWQQRQAGEVVCRQDDATDGMYVVLS
GRLRAKRQGNAAVVAEYGKGESFGALEVLTDMPRASTVVAVRDTELAKIS
STMFKFVIKKYPQVVVQFSKIVG
back to top

mRNA from alignment at M-pyrifera_M_contig92830:41..757-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92830.21468.1 ID=mRNA_M-pyrifera_M_contig92830.21468.1|Name=mRNA_M-pyrifera_M_contig92830.21468.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=717bp|location=Sequence derived from alignment at M-pyrifera_M_contig92830:41..757- (Macrocystis pyrifera P11B4 male)
GCTGGCGACACTGTCGGCCAGCTCGCCGTGGTGACAGGAGACTTCTACTA CCGCGTGCAGACGCGCGAGGGCGGCAGGCCTGACGCCGCCACGGTGCTGG GCAAGCTGCGCAAGGACGCCTTCGACGCGCTCGTCGCCAAGCGGCCCACG GTGATCGGAAGGACGATCTACATGATCTACCTCCAGCTGGCGCCCGTGGT GAAGCACGTCGACTTTGCGCTGGACTGGCAGCAGCGGCAGGCAGGCGAGG TGGTGTGTAGGCAGGACGACGCCACCGACGGTATGTACGTCGTCCTCAGC GGCCGCCTCCGAGCGTTCGGTCCGACCTCCCCCGCCGCAGCTCAGACCGT CCTGCCACACAGGCCCGAGGCGGCCGCTGAGGCGAGGGCCAAGGCCAGCG CAGGAGAGGGAACTGAGGCAGCGCAGCTCTCGCATCACTCGGTGGAGAGC GGAGGCCTCGCGGGCCTCGCCAGCCTCTCTGTGCCTGGGGGAATGTCGCT GTTTGGCGTGAGCAAGCGACAAGGCAACGCAGCGGTGGTGGCAGAGTATG GCAAGGGAGAGAGCTTTGGTGCGCTGGAGGTGCTCACGGACATGCCCCGC GCCTCGACGGTGGTGGCGGTGCGCGACACGGAGCTGGCCAAGATCTCCTC GACGATGTTCAAGTTCGTGATCAAGAAGTACCCCCAGGTGGTGGTGCAGT TCTCGAAGATCGTCGGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig92830:41..757-

>mRNA_M-pyrifera_M_contig92830.21468.1 ID=mRNA_M-pyrifera_M_contig92830.21468.1|Name=mRNA_M-pyrifera_M_contig92830.21468.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig92830:41..757- (Macrocystis pyrifera P11B4 male)
GCTGGCGACACTGTCGGCCAGCTCGCCGTGGTGACAGGAGACTTCTACTA
CCGCGTGCAGACGCGCGAGGGCGGCAGGCCTGACGCCGCCACGGTGCTGG
GCAAGCTGCGCAAGGACGCCTTCGACGCGCTCGTCGCCAAGCGGCCCACG
GTGATCGGAAGGACGATCTACATGATCTACCTCCAGCTGGCGCCCGTGGT
GAAGCACGTCGACTTTGCGCTGGACTGGCAGCAGCGGCAGGCAGGCGAGG
TGGTGTGTAGGCAGGACGACGCCACCGACGGTATGTACGTCGTCCTCAGC
GGCCGCCTCCGAGCGCTGGCGACACTGTCGGCCAGCTCGCCGTGGTGACA
GGAGACTTCTACTACCGCGTGCAGACGCGCGAGGGCGGCAGGCCTGACGC
CGCCACGGTGCTGGGCAAGCTGCGCAAGGACGCCTTCGACGCGCTCGTCG
CCAAGCGGCCCACGGTGATCGGAAGGACGATCTACATGATCTACCTCCAG
CTGGCGCCCGTGGTGAAGCACGTCGACTTTGCGCTGGACTGGCAGCAGCG
GCAGGCAGGCGAGGTGGTGTGTAGGCAGGACGACGCCACCGACGGTATGT
ACGTCGTCCTCAGCGGCCGCCTCCGAGCCAAGCGACAAGGCAACGCAGCG
GTGGTGGCAGAGTATGGCAAGGGAGAGAGCTTTGGTGCGCTGGAGGTGCT
CACGGACATGCCCCGCGCCTCGACGGTGGTGGCGGTGCGCGACACGGAGC
TGGCCAAGATCTCCTCGACGATGTTCAAGTTCGTGATCAAGAAGTACCCC
CAGGTGGTGGTGCAGTTCTCGAAGATCGTCGGCCAAGCGACAAGGCAACG
CAGCGGTGGTGGCAGAGTATGGCAAGGGAGAGAGCTTTGGTGCGCTGGAG
GTGCTCACGGACATGCCCCGCGCCTCGACGGTGGTGGCGGTGCGCGACAC
GGAGCTGGCCAAGATCTCCTCGACGATGTTCAAGTTCGTGATCAAGAAGT
ACCCCCAGGTGGTGGTGCAGTTCTCGAAGATCGTCGGC
back to top