mRNA_M-pyrifera_M_contig92826.21466.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A538LI66_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LI66_9ACTN) HSP 1 Score: 113 bits (283), Expect = 2.360e-25 Identity = 78/213 (36.62%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 1 RDVAMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDLPPVERQVLAFLDAVTDSLHGAA-------RAGAEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGG-DKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLV 615 RD A+ +L R+LKRAL DDQ+D+LDR+R K E LPPV F A + L A R G E G + G+G+++ L LA A+ PLR R+ERS+ D +++ + A YR+ + + ++A D + AF+ G G T + WI D E PDC DN LAGP+ + + +PTG P GCRCL+ Sbjct: 597 RDDAIAPITVALSRRLKRALQDDQNDLLDRLRSRGKRPLDEILPPVAEHQEHFRRAGVELLGRAELAGTSFLREGREGDGRANGSGVEKDSIALAGELAIAITDPLRRRLERSLGDAADPDDASLVDNVGAAYREWKGPRIERVAGDHVVAAFSQGELGVAREGTALRWIVDDGDERCPDCDDNALAGPLPRGERYPTGQAHPPAHSGCRCLL 809
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A7W0RFH1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0RFH1_9ACTN) HSP 1 Score: 108 bits (269), Expect = 5.410e-25 Identity = 71/209 (33.97%), Postives = 107/209 (51.20%), Query Frame = 1 Query: 1 RDVAMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDL-PPVERQVLAFLDAVTDSLHGAARAGAEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLVVSE 624 RD +L + LKRALAD+Q++VLD +R+ + SL++L P + F+ A L +AG G +G+G + ++ E LA + LR+RV S+ GD+ + + + A+YR+ + V +A ++ A A G + V + W+ D PDC DN LAGP+ K + FPTG P PGCRCLV S Sbjct: 65 RDAETEPIERALAKALKRALADEQNEVLDSLRRLRTAPSLDELLPSADAHRRRFVTAARSGLE---QAGMLGLGGGSGSGSAPPIDDVAESLAEDITVALRSRVATSVEEAEGDEAVLAQGVSASYREWKMTRVEPMARHAVVAAHARGRFAVVEGPLR--WVVDDEQGACPDCDDNALAGPIDKGQVFPTGQPHPPAHPGCRCLVRSS 268
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A538JVT6_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JVT6_9ACTN) HSP 1 Score: 110 bits (276), Expect = 1.740e-24 Identity = 75/210 (35.71%), Postives = 107/210 (50.95%), Query Frame = 1 Query: 1 RDVAMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLED-LPPVERQVLAFLDAVTDSLHGAARAGAEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLVVSEA 627 RD + L R+LKRAL D+Q++VLDR+R A+ + L V Q + D L AA+AG + + G + V +L LA+ + PLR R+ER++T D E V+ + A YR ++ + ++ LA AF +G Y A ++ + W+ D PDC DN LAGP K FPTG P GCRCL+V A Sbjct: 411 RDEVLEPLSAQLVRKLKRALQDEQNEVLDRLRTARGKAQPDVVLLSVVDQARRYRDVAEPLLARAAQAGVRSVTGADGR-VALPVDDLAVDLASDLVGPLRDRLERALTAAPDDDEAVVASLGAGYRQWKAERIEPVSRQHLAAAFTMGAYRASPDDASLRWLVDDDEGACPDCDDNALAGPTPKGTKFPTGQTYPPAHAGCRCLLVPAA 619
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A7V9V805_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9V805_9ACTN) HSP 1 Score: 107 bits (266), Expect = 3.160e-24 Identity = 78/207 (37.68%), Postives = 104/207 (50.24%), Query Frame = 1 Query: 1 RDVAMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDLPPVERQVLAFLDAVTDSLHGAARAGAEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGGDKEEVL-EPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLVV 618 RD A+ L R+LKRAL D+Q++VLD +R + S + LP + Q + D L AA AGA S GA VG++ E LA + PLR R++R + G GD E I A YR+ ++ V LA D+ AF+ G A A + W+ D P DC+DN LAGP +PTG P GCRCL+V Sbjct: 103 RDAALEAVTSRLSRKLKRALQDEQNEVLDGLRSHRGPPSDQLLPSIANQADRYRRTSVDLLEDAAVAGARFM--SPGASPAPEVGDVAENLAQNLVGPLRRRLQRGLAGENGDDAAATAERISAAYRECKTQIVDGLAGDATIGAFSRGAAQA-APGALLRWVVDDDGGPCSDCYDNALAGPTASGDTYPTGQVHPPAHAGCRCLLV 306
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A7Y2DJT7_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DJT7_9ACTN) HSP 1 Score: 108 bits (270), Expect = 1.280e-23 Identity = 69/146 (47.26%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 10 AMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDLPPVERQVLAFLDAVTDSLHGAARAGAEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGV 447 +M R P L+RQLKRALADDQSD+LD VR+ K ++EDLP ERQV F DA+ SL +A AGA A G+ V LV A+ + +R V ++ GG+ + LE IR++YRD RSN + L DDSLA+AF +GV Sbjct: 658 SMDRLAPDLKRQLKRALADDQSDLLDAVRRGGKQATVEDLPAEERQVARFADALESSLRASANAGAGAVDGRIWPGL---VDGLVAETAHRLVDDVRGVVTAAVNANGGE-DAALEAIRSHYRDLRSNRLNGLVDDSLAQAFGLGV 799
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A7V9J5I7_9ACTN (Cell wall synthesis protein Wag31 n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9J5I7_9ACTN) HSP 1 Score: 105 bits (261), Expect = 1.920e-22 Identity = 76/209 (36.36%), Postives = 109/209 (52.15%), Query Frame = 1 Query: 1 RDVAMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDLPPVERQVLA-FLDAVTDSLHGAARAGAEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLVVSE 624 RDV + SL + LKRALAD+Q++VLD +R+++ + L DL P A +L L AA G A D+ ID+ L LA +A +RAR++R++ GD+ ++E I A YR+ ++ V LA +A A + G + A + W+ D P PDC DN LAG + K +PFPTG P GCRC V + Sbjct: 474 RDVEVGDVERSLAKALKRALADEQNEVLDILRRSRGGVPLVDLLPSPSDHTARYLAVAGPDLRTAAGRGL--ASDAEPPSIDD----LAVSLAATLADDVRARLQRALEAADGDEGPLVEGISAAYREWKTTRVEPLARHHVAAAHSRGRFAACEGRLR--WVVDGEEGPCPDCDDNALAGSIDKNQPFPTGQLHPPAHVGCRCTVAGD 674
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A7Y2N8V7_9ACTN (DivIVA domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N8V7_9ACTN) HSP 1 Score: 105 bits (261), Expect = 2.010e-22 Identity = 66/145 (45.52%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 13 MTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDLPPVERQVLAFLDAVTDSLHGAARAGAEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGV 447 +T P L+RQLKRALADDQSD+LD VR+ K SLEDLPP +RQV F DA+ SL +A GA A G G+ V LV A + +RA V+ +++ GG+ + LE IR++YRD R+N + +L D +L +F +GV Sbjct: 634 ITDLAPGLKRQLKRALADDQSDLLDAVRRGGKDASLEDLPPRDRQVARFADALESSLRASANNGANAVGGKIWPGM---VDGLVADTATKLVADVRASVDAAVSSDGGE-DRSLETIRSHYRDVRTNRLNRLVDSALNASFDLGV 774
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A538DQM4_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DQM4_9ACTN) HSP 1 Score: 104 bits (260), Expect = 2.480e-22 Identity = 72/210 (34.29%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 1 RDVAMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLED-LPPVERQVLAFLDAVTDSLHGAARAGAEAAGDSTGAGIDEAVGELVERLANA-VAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLVVSE 624 RD + F L R KR++ D+Q+++ D +R+ K ++++ L + + AVT ++ ARAGA A TG DE+ + R+ A + PLRA+++R D EE ++ +R+ YR+A+S +A + F GV A + T V W+ D SPDC DN+LAGP+ K FPTG P CRCLV+ E Sbjct: 415 RDAVIDPFEAKLARLFKRSVTDEQNEMQDAIRRRKNKATVDEILADPDTHAARYEAAVTTTIGEVARAGA-AMFALTGTVDDESFRPMTRRIVGASLVAPLRAQLDRVFADTTSD-EERIDRVRSAYREAKSQRADLVAHELALAGFNAGVIAAAPDGTSVRWVTDDVRGCSPDCQDNSLAGPIPAGKLFPTGSAHPPAHQHCRCLVIPE 622
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A6J4HGG4_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4HGG4_9ACTN) HSP 1 Score: 100 bits (249), Expect = 7.810e-21 Identity = 74/203 (36.45%), Postives = 102/203 (50.25%), Query Frame = 1 Query: 31 SLRRQLKRALADDQSDVLDRVRQAKKTISLEDL-PPVERQVLAFLDAVTDSLHGAARAG------AEAAGDSTGAGIDEAVGELVERLANAVAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLVV 618 +L R LKRALAD+Q+ +LD +RQAK + L PP E + L AA +G AE +T G D G LR R+ R++ GGD+ V + A YR+ ++ + LA + A+A G + A A++ ++ W+ DP SPDC DN LAGP K + FPTG P PGCRCLV+ Sbjct: 528 ALARALKRALADEQNQLLDDLRQAKGVPGPDVLLPPAEEHAARCARVAVEVLAAAAASGGGSLPAAEVQAMATAMGADLVAG-------------LRPRLARALDDGGGDEAAVAGAVSAAYREWKTARIEPLARHHVLSAWAAGSF-ASADDAELQWVVDPEVGCSPDCADNVLAGPTAKGEAFPTGQLHPPAHPGCRCLVL 716
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Match: A0A3C1CM97_9ACTN (Cell wall synthesis protein Wag31 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1CM97_9ACTN) HSP 1 Score: 98.2 bits (243), Expect = 4.810e-20 Identity = 72/208 (34.62%), Postives = 105/208 (50.48%), Query Frame = 1 Query: 1 RDVAMTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDLPPVERQVLAFLDAVTDSLHGAARAGAEAAGDSTGAGIDEA--VGELVERLANAVAKPLRARVERSITGVGGDKEEVLEPIRANYRDARSNDVPQLADDSLAEAFAIGVYGAVANNTKVVWIADPRHEPSPDCHDNTLAGPVKKPKPFPTGLKLPLGGPGCRCLVV 618 RD + +L R+LKRALADDQ+DVLDR+R A + + L + + + A L AARAGA G S D+A V +L LA ++ PLR + + + D+ ++E + + YRD + V ++A D AF+ ++ W+ D PDC DN LAG + + + FPTG P PGCRCL+V Sbjct: 465 RDELLGPAAAALARRLKRALADDQNDVLDRLR-ALGSFGPQVLVSEDEERSRYRQAADGQLLEAARAGAVFGGGSP----DDAPSVDDLSAELATSIVAPLRRHLLEAPAPLEDDEAAMVEHVGSAYRDWKGQRVERVAHDHAHAAFSRAALAVTPEGRQLRWLVDDDGGKCPDCDDNALAGALPRGEAFPTGHVHPPAHPGCRCLLV 667 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92826.21466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92826.21466.1 >prot_M-pyrifera_M_contig92826.21466.1 ID=prot_M-pyrifera_M_contig92826.21466.1|Name=mRNA_M-pyrifera_M_contig92826.21466.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp MTRFGPSLRRQLKRALADDQSDVLDRVRQAKKTISLEDLPPVERQVLAFLback to top mRNA from alignment at M-pyrifera_M_contig92826:2..658+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92826.21466.1 ID=mRNA_M-pyrifera_M_contig92826.21466.1|Name=mRNA_M-pyrifera_M_contig92826.21466.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig92826:2..658+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92826:2..658+ >mRNA_M-pyrifera_M_contig92826.21466.1 ID=mRNA_M-pyrifera_M_contig92826.21466.1|Name=mRNA_M-pyrifera_M_contig92826.21466.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig92826:2..658+ (Macrocystis pyrifera P11B4 male)back to top |