mRNA_M-pyrifera_M_contig92823.21464.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92823.21464.1
Unique NamemRNA_M-pyrifera_M_contig92823.21464.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: A3JFC0_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=5 Tax=Marinobacter TaxID=2742 RepID=A3JFC0_9GAMM)

HSP 1 Score: 468 bits (1204), Expect = 1.460e-162
Identity = 221/244 (90.57%), Postives = 236/244 (96.72%), Query Frame = 1
Query:    4 SSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            +SAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIP++Y W +LK K+GAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMV STQWV+MGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMV+C+RPEPGKTIADPACGTGGFFLAAYDF+T   NY+LDKAQK+F+KH TF+GNEIVANTRRMCLMNMFLHNIGEIDG+S+VSPNDA
Sbjct:    4 ASAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPEQYRWHTLKTKKGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVDSTQWVIMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVDCLRPEPGKTIADPACGTGGFFLAAYDFLTDTQNYQLDKAQKSFIKHDTFFGNEIVANTRRMCLMNMFLHNIGEIDGDSLVSPNDA 247          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: UPI001CF1926E (type I restriction-modification system subunit M n=1 Tax=unclassified Methylophaga TaxID=2629249 RepID=UPI001CF1926E)

HSP 1 Score: 468 bits (1203), Expect = 1.820e-162
Identity = 220/245 (89.80%), Postives = 238/245 (97.14%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            M++API+SKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEY+KPPYNR+VGIP++YNW +LK+K+GAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMV STQW  MGADVKGDIYEGLLE+NAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDF+T  ++Y+LDK+QK+FLKH TFYGNEIVANTRRMCLMNMFLHNIGEIDGES+VSPNDA
Sbjct:    1 MTTAPIVSKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYSKPPYNRNVGIPERYNWSTLKSKKGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVDSTQWATMGADVKGDIYEGLLERNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFLTDTNHYQLDKSQKSFLKHNTFYGNEIVANTRRMCLMNMFLHNIGEIDGESLVSPNDA 245          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: A0A6C0U4N3_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=3 Tax=Halieaceae TaxID=1706372 RepID=A0A6C0U4N3_9GAMM)

HSP 1 Score: 464 bits (1194), Expect = 4.670e-161
Identity = 222/243 (91.36%), Postives = 234/243 (96.30%), Query Frame = 1
Query:    7 SAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            +APIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEY++PPYNR+VGIPKKY+WQ+LK K+GAELEVLYVELLRALGT+KGMLGQIFTK+QNKIQDPAKLYRLI MV STQW  MGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEP KTIADPACGTGGFFLAAYDFIT   NYKLDKAQKAFLKH+TFYGNEIVANTRRMCLMNMFLHNIGEIDG+S+VSPNDA
Sbjct:    4 TAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYSRPPYNRNVGIPKKYSWQTLKAKKGAELEVLYVELLRALGTKKGMLGQIFTKSQNKIQDPAKLYRLIAMVDSTQWATMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPKKTIADPACGTGGFFLAAYDFITDTQNYKLDKAQKAFLKHETFYGNEIVANTRRMCLMNMFLHNIGEIDGDSLVSPNDA 246          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: A0A258N4C0_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Thiotrichales bacterium 35-46-9 TaxID=1970606 RepID=A0A258N4C0_9GAMM)

HSP 1 Score: 464 bits (1193), Expect = 5.800e-161
Identity = 222/245 (90.61%), Postives = 235/245 (95.92%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            M+SAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEY+KPPYNR+V IP++Y WQ+LK KRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMV STQWV+MGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVEC+RPEP KTIADP+CGTGGFFLAAYDF+T+ +N  LDKAQK FLKH TFYGNEIVANTRRMCLMNMFLHNIGEIDGES+VSPNDA
Sbjct:    1 MTSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYSKPPYNRNVSIPEQYTWQTLKTKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVDSTQWVMMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECIRPEPNKTIADPSCGTGGFFLAAYDFLTNPNNGILDKAQKTFLKHHTFYGNEIVANTRRMCLMNMFLHNIGEIDGESLVSPNDA 245          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: A0A1I1IYH3_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1I1IYH3_9GAMM)

HSP 1 Score: 458 bits (1179), Expect = 8.280e-159
Identity = 215/245 (87.76%), Postives = 233/245 (95.10%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            M++A IIS+VWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEY+KPPYNRDVGIPKKY+W +LK K+GAELEVLYVELLR LG++KGMLGQIFTKAQNKIQDPAKLYRLIDM+ ST W+VMGAD+KGDIYEGLLEKNAEDTKSGAGQYFTPRALIR MVECVRPEPGKTIADPACGTGGFFLAAYDF+T+ DNY LD+ QK FLKH TFYGNEIVANTRR+CLMNMFLHNIGEIDG+S+VSPNDA
Sbjct:    1 MNTASIISRVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYSKPPYNRDVGIPKKYSWPALKGKKGAELEVLYVELLRQLGSRKGMLGQIFTKAQNKIQDPAKLYRLIDMIDSTNWLVMGADIKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRTMVECVRPEPGKTIADPACGTGGFFLAAYDFLTNPDNYNLDREQKQFLKHSTFYGNEIVANTRRLCLMNMFLHNIGEIDGDSLVSPNDA 245          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: UPI000BFEFEEA (type I restriction-modification system subunit M n=1 Tax=Lacimicrobium alkaliphilum TaxID=1526571 RepID=UPI000BFEFEEA)

HSP 1 Score: 457 bits (1175), Expect = 3.240e-158
Identity = 214/245 (87.35%), Postives = 234/245 (95.51%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            M+++ IIS+VWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPY+RDVGIP+KYNWQ+LK K+GAELEVLYVELLR LG +KGMLGQIFTKAQNKIQDPAKLYRLIDM+ STQW++MGADVKGDIYEGLLEKNAEDTKSGAGQYFTPR+LIRAMVECVRPEPGKTIADP+CGTGGFFL AYDF+T+ DNY+LDK QK  LKH TFYGNEIVANTRR+CLMNMFLHNIGEIDGES++SPNDA
Sbjct:    1 MNTSTIISRVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYSRDVGIPEKYNWQALKRKKGAELEVLYVELLRELGQEKGMLGQIFTKAQNKIQDPAKLYRLIDMIDSTQWLMMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRSLIRAMVECVRPEPGKTIADPSCGTGGFFLRAYDFLTNPDNYQLDKEQKHLLKHHTFYGNEIVANTRRLCLMNMFLHNIGEIDGESLISPNDA 245          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: UPI0002883007 (type I restriction-modification system subunit M n=2 Tax=Hyphomicrobiales TaxID=356 RepID=UPI0002883007)

HSP 1 Score: 456 bits (1172), Expect = 1.090e-157
Identity = 218/245 (88.98%), Postives = 229/245 (93.47%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            MS+API+SKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPY+R VG+P+KY+WQSLK KRGAELE  Y+ELLR LG+ KGMLGQIFTKAQNKIQDPAKLYRLIDMV   QWV MGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFIT   NY+LDKAQKAFLKH+ F+GNEIVANTRRMCLMNMFLHNIGEIDGE  VSPNDA
Sbjct:    1 MSTAPIVSKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYSRTVGVPEKYSWQSLKAKRGAELEGHYIELLRELGSHKGMLGQIFTKAQNKIQDPAKLYRLIDMVDDVQWVTMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITEPKNYQLDKAQKAFLKHEAFHGNEIVANTRRMCLMNMFLHNIGEIDGEGAVSPNDA 245          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: A0A0A7S348_FRIPE (Site-specific DNA-methyltransferase (adenine-specific) n=26 Tax=Proteobacteria TaxID=1224 RepID=A0A0A7S348_FRIPE)

HSP 1 Score: 452 bits (1164), Expect = 1.570e-156
Identity = 214/245 (87.35%), Postives = 231/245 (94.29%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            M+++ IISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPY+RDVGIP KYNWQ+L +K+GAELEVLYVELL  LG QKGMLGQIFTKAQNKIQDPAKLYRLIDM+ STQW++MGADVKGDIYEGLLEKNAEDTKSGAGQYFTPR LIRAMVEC+RPEPGKTIADPACGTGGFFLAAYDF+T+ +N  LDK QK FLKH TFYGNEIVANTRR+CLMNMFLHNIGEIDG+S+VSPNDA
Sbjct:    1 MNTSTIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYSRDVGIPAKYNWQALTSKKGAELEVLYVELLLELGKQKGMLGQIFTKAQNKIQDPAKLYRLIDMIDSTQWIMMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRPLIRAMVECIRPEPGKTIADPACGTGGFFLAAYDFLTNPENTALDKEQKQFLKHSTFYGNEIVANTRRLCLMNMFLHNIGEIDGDSLVSPNDA 245          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: A0A853I4W4_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A853I4W4_9GAMM)

HSP 1 Score: 452 bits (1163), Expect = 2.220e-156
Identity = 213/245 (86.94%), Postives = 233/245 (95.10%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            M++A IIS+VWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKY WQ+L +K+GAELEV YVELLRALG +KGMLGQIFTKAQNKIQDPAKL RLIDM+  TQWV+MGADVKGDIYEGLLEKNAEDTKSGAGQYFTPR+LIRA+VECVRPEPGKTIADP+CGTGGFFLAAYDF+T+ +NY LDK+QK FLKH TF+GNEIVANTRR+CLMNMFLHNIGEIDGES++SPNDA
Sbjct:    1 MNTASIISRVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYQWQTLASKKGAELEVHYVELLRALGKKKGMLGQIFTKAQNKIQDPAKLSRLIDMIDGTQWVMMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRSLIRAIVECVRPEPGKTIADPSCGTGGFFLAAYDFLTNTENYHLDKSQKLFLKHNTFHGNEIVANTRRLCLMNMFLHNIGEIDGESLISPNDA 245          
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Match: A0A2D7XC67_9BURK (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Pusillimonas sp. (ex Stolz et al. 2005) TaxID=1979962 RepID=A0A2D7XC67_9BURK)

HSP 1 Score: 451 bits (1161), Expect = 5.110e-156
Identity = 213/245 (86.94%), Postives = 231/245 (94.29%), Query Frame = 1
Query:    1 MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNRDVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKIQDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQKAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA 735
            M+++ IIS+VWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEY+KPPY+RDVGIP KYNWQ+L +KRGAELEVLYVELLR LG QKG+LGQIFTKAQNKIQDPAKL+RLIDM+ STQW++MG DVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVEC+RPEPGKTIADPACGTGGFFLAAYDF+T+  NY LDK QK FLKH TFYGNEIVANTRR+CLMNMFLHNIGEIDG S+VSPNDA
Sbjct:    1 MNTSTIISRVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYSKPPYSRDVGIPVKYNWQALTSKRGAELEVLYVELLRELGKQKGILGQIFTKAQNKIQDPAKLHRLIDMIDSTQWIMMGVDVKGDIYEGLLEKNAEDTKSGAGQYFTPRALIRAMVECIRPEPGKTIADPACGTGGFFLAAYDFLTNPLNYSLDKEQKQFLKHSTFYGNEIVANTRRLCLMNMFLHNIGEIDGNSLVSPNDA 245          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92823.21464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A3JFC0_9GAMM1.460e-16290.57Site-specific DNA-methyltransferase (adenine-speci... [more]
UPI001CF1926E1.820e-16289.80type I restriction-modification system subunit M n... [more]
A0A6C0U4N3_9GAMM4.670e-16191.36Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A258N4C0_9GAMM5.800e-16190.61Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A1I1IYH3_9GAMM8.280e-15987.76Site-specific DNA-methyltransferase (adenine-speci... [more]
UPI000BFEFEEA3.240e-15887.35type I restriction-modification system subunit M n... [more]
UPI00028830071.090e-15788.98type I restriction-modification system subunit M n... [more]
A0A0A7S348_FRIPE1.570e-15687.35Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A853I4W4_9GAMM2.220e-15686.94Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A2D7XC67_9BURK5.110e-15686.94Site-specific DNA-methyltransferase (adenine-speci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92823contigM-pyrifera_M_contig92823:1..735 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score469.2
Seed ortholog evalue1.2e-129
Seed eggNOG ortholog270374.MELB17_05779
KEGG koko:K03427
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG0286 Type I restriction-modification system methyltransferase subunit
EggNOG OGs1MW3A@1224,1RRVF@1236,464A1@72275,COG0286@1,COG0286@2
EC2.1.1.72
COG Functional cat.V
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02048
Exons1
Model size735
Cds size735
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816841.1561186-CDS-M-pyrifera_M_contig92823:0..7351622816841.1561186-CDS-M-pyrifera_M_contig92823:0..735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92823 1..735 -
1692278209.8366394-CDS-M-pyrifera_M_contig92823:0..7351692278209.8366394-CDS-M-pyrifera_M_contig92823:0..735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92823 1..735 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92823.21464.1prot_M-pyrifera_M_contig92823.21464.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92823 1..735 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92823.21464.1

>prot_M-pyrifera_M_contig92823.21464.1 ID=prot_M-pyrifera_M_contig92823.21464.1|Name=mRNA_M-pyrifera_M_contig92823.21464.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
MSSAPIISKVWSFCTTLRDDGVGYGDYLEQLTYLIFLKMADEYAKPPYNR
DVGIPKKYNWQSLKNKRGAELEVLYVELLRALGTQKGMLGQIFTKAQNKI
QDPAKLYRLIDMVGSTQWVVMGADVKGDIYEGLLEKNAEDTKSGAGQYFT
PRALIRAMVECVRPEPGKTIADPACGTGGFFLAAYDFITHADNYKLDKAQ
KAFLKHQTFYGNEIVANTRRMCLMNMFLHNIGEIDGESMVSPNDA
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mRNA from alignment at M-pyrifera_M_contig92823:1..735-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92823.21464.1 ID=mRNA_M-pyrifera_M_contig92823.21464.1|Name=mRNA_M-pyrifera_M_contig92823.21464.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=735bp|location=Sequence derived from alignment at M-pyrifera_M_contig92823:1..735- (Macrocystis pyrifera P11B4 male)
ATGAGTAGTGCCCCTATCATCTCCAAAGTCTGGAGCTTTTGTACCACCCT GCGCGACGACGGTGTGGGTTATGGCGATTATCTGGAGCAACTCACCTACC TGATCTTCCTGAAAATGGCGGACGAGTATGCCAAACCACCTTACAACCGC GACGTAGGTATTCCGAAGAAGTACAACTGGCAGAGCCTGAAGAACAAGCG CGGTGCGGAGCTTGAAGTTCTGTATGTCGAGCTGCTGCGGGCTCTGGGCA CCCAAAAGGGCATGCTTGGTCAGATTTTCACGAAGGCGCAGAATAAGATC CAAGACCCAGCCAAACTCTATCGCCTGATAGATATGGTGGGTAGCACCCA ATGGGTGGTCATGGGCGCCGATGTCAAAGGCGATATCTATGAGGGCTTGC TGGAGAAAAACGCTGAGGACACCAAATCCGGCGCCGGCCAGTATTTCACC CCGCGGGCGCTGATTCGCGCTATGGTCGAATGCGTGCGCCCGGAGCCGGG CAAGACTATTGCCGACCCGGCCTGTGGTACCGGCGGCTTTTTCCTCGCTG CCTATGACTTCATCACCCACGCTGATAACTACAAGCTGGATAAAGCCCAG AAGGCCTTTCTGAAACACCAGACCTTCTATGGCAATGAGATTGTGGCCAA TACTCGCCGAATGTGCCTGATGAATATGTTCCTGCACAACATCGGTGAGA TTGATGGCGAGAGCATGGTTTCGCCCAACGACGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92823:1..735-

>mRNA_M-pyrifera_M_contig92823.21464.1 ID=mRNA_M-pyrifera_M_contig92823.21464.1|Name=mRNA_M-pyrifera_M_contig92823.21464.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig92823:1..735- (Macrocystis pyrifera P11B4 male)
ATGAGTAGTGCCCCTATCATCTCCAAAGTCTGGAGCTTTTGTACCACCCT
GCGCGACGACGGTGTGGGTTATGGCGATTATCTGGAGCAACTCACCTACC
TGATCTTCCTGAAAATGGCGGACGAGTATGCCAAACCACCTTACAACCGC
GACGTAGGTATTCCGAAGAAGTACAACTGGCAGAGCCTGAAGAACAAGCG
CGGTGCGGAGCTTGAAGTTCTGTATGTCGAGCTGCTGCGGGCTCTGGGCA
CCCAAAAGGGCATGCTTGGTCAGATTTTCACGAAGGCGCAGAATAAGATC
CAAGACCCAGCCAAACTCTATCGCCTGATAGATATGGTGGGTAGCACCCA
ATGGGTGGTCATGGGCGCCGATGTCAAAGGCGATATCTATGAGGGCTTGC
TGGAGAAAAACGCTGAGGACACCAAATCCGGCGCCGGCCAGTATTTCACC
CCGCGGGCGCTGATTCGCGCTATGGTCGAATGCGTGCGCCCGGAGCCGGG
CAAGACTATTGCCGACCCGGCCTGTGGTACCGGCGGCTTTTTCCTCGCTG
CCTATGACTTCATCACCCACGCTGATAACTACAAGCTGGATAAAGCCCAG
AAGGCCTTTCTGAAACACCAGACCTTCTATGGCAATGAGATTGTGGCCAA
TACTCGCCGAATGTGCCTGATGAATATGTTCCTGCACAACATCGGTGAGA
TTGATGGCGAGAGCATGGTTTCGCCCAACGACGCCATGAGTAGTGCCCCT
ATCATCTCCAAAGTCTGGAGCTTTTGTACCACCCTGCGCGACGACGGTGT
GGGTTATGGCGATTATCTGGAGCAACTCACCTACCTGATCTTCCTGAAAA
TGGCGGACGAGTATGCCAAACCACCTTACAACCGCGACGTAGGTATTCCG
AAGAAGTACAACTGGCAGAGCCTGAAGAACAAGCGCGGTGCGGAGCTTGA
AGTTCTGTATGTCGAGCTGCTGCGGGCTCTGGGCACCCAAAAGGGCATGC
TTGGTCAGATTTTCACGAAGGCGCAGAATAAGATCCAAGACCCAGCCAAA
CTCTATCGCCTGATAGATATGGTGGGTAGCACCCAATGGGTGGTCATGGG
CGCCGATGTCAAAGGCGATATCTATGAGGGCTTGCTGGAGAAAAACGCTG
AGGACACCAAATCCGGCGCCGGCCAGTATTTCACCCCGCGGGCGCTGATT
CGCGCTATGGTCGAATGCGTGCGCCCGGAGCCGGGCAAGACTATTGCCGA
CCCGGCCTGTGGTACCGGCGGCTTTTTCCTCGCTGCCTATGACTTCATCA
CCCACGCTGATAACTACAAGCTGGATAAAGCCCAGAAGGCCTTTCTGAAA
CACCAGACCTTCTATGGCAATGAGATTGTGGCCAATACTCGCCGAATGTG
CCTGATGAATATGTTCCTGCACAACATCGGTGAGATTGATGGCGAGAGCA
TGGTTTCGCCCAACGACGCC
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