mRNA_M-pyrifera_M_contig92781.21460.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A8B8DJH6_CRAVI (DNA-binding protein SMUBP-2-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DJH6_CRAVI) HSP 1 Score: 147 bits (370), Expect = 7.360e-37 Identity = 90/234 (38.46%), Postives = 136/234 (58.12%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSGE----VHKLTPGDIVEAFARGKRG---SIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681 G YGR+++ G G H LTPGDIV A + S+G G+V A + I +A D +E+ +++E ++ L+ND T+ RL A+ G ++ V + E + +PP +L +I N L+ SQ+ AV+ L +V ++HGPPGTGKTTTV+E+I Q + +G +++A A SNIAVDNLV LA VVR+GHPAR+ P + +SLDA+++S + Sbjct: 55 GFYGRTVVTFEPGGGSQELPAHNLTPGDIVSLNASSSQQENESLGSGIVTHAGKSAISVAFDEKEDLFDLKEEDHYKLTKLANDVTYKRLKNALNNLRKGDFGKSSKLVNVLFG---EAELSPPFDLKDIHLVNTGLDESQEDAVKFALSQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPSNIAVDNLVERLALNKQRVVRLGHPARVLPHIQKYSLDAILSSSEE 285
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A267G3D9_9PLAT (AN1-type domain-containing protein (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267G3D9_9PLAT) HSP 1 Score: 146 bits (368), Expect = 1.400e-36 Identity = 99/247 (40.08%), Postives = 135/247 (54.66%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSGEV----HKLTPGDIVEAF-ARGKRGSIGKGVVQKASEERIVLAMDGEEEEI-------EVEEGMGVRVICLSNDATHVRLVEAMRGF-----GVGRVLFGERVRQVAYE---KTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681 GMYGR +LE H + PGDIV F ++ ++ IG G+V K + +AM+ ++ ++E G V+ L +D T RL + + + +L GER + + E A G +++ N L+ SQ+ AVE GLR D+ +IHGPPGTGKTTTVVEL+RQ V RGER++ A SN AVDNL L A+GV VR+GHPAR P V+ HSLDAL+A D Sbjct: 59 GMYGRRVLEFETYQRAKDLPSHSIAPGDIVGIFHSQQEQQQIGSGIVTKVLARAVCVAMETDQASSAASSGDGQLEVGYKYSVVKLGSDVTFKRLKKGLLALLQKPPSLADLLLGERSLAPTRDLPPPSGESTAASGSSRG-VSYFNPHLDESQRAAVELGLRRSDLVMIHGPPGTGKTTTVVELVRQLVARGERLLCCAPSNTAVDNLAERLIASGVRCVRLGHPARQLPQVVEHSLDALLARSED 304
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A267GB73_9PLAT (AN1-type domain-containing protein (Fragment) n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GB73_9PLAT) HSP 1 Score: 146 bits (368), Expect = 1.400e-36 Identity = 99/247 (40.08%), Postives = 135/247 (54.66%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSGEV----HKLTPGDIVEAF-ARGKRGSIGKGVVQKASEERIVLAMDGEEEEI-------EVEEGMGVRVICLSNDATHVRLVEAMRGF-----GVGRVLFGERVRQVAYE---KTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681 GMYGR +LE H + PGDIV F ++ ++ IG G+V K + +AM+ ++ ++E G V+ L +D T RL + + + +L GER + + E A G +++ N L+ SQ+ AVE GLR D+ +IHGPPGTGKTTTVVEL+RQ V RGER++ A SN AVDNL L A+GV VR+GHPAR P V+ HSLDAL+A D Sbjct: 47 GMYGRRVLEFETYQRAKDLPSHSIAPGDIVGIFHSQQEQQQIGSGIVTKVLARAVCVAMETDQASSAASSGDGQLEVGYKYSVVKLGSDVTFKRLKKGLLALLQKPPSLADLLLGERSLAPTRDLPPPSGESTAASGSSRG-VSYFNPHLDESQRAAVELGLRRSDLVMIHGPPGTGKTTTVVELVRQLVARGERLLCCAPSNTAVDNLAERLIASGVRCVRLGHPARQLPQVVEHSLDALLARSED 292
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: M2NIT9_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2NIT9_BAUPA) HSP 1 Score: 144 bits (363), Expect = 4.260e-36 Identity = 98/238 (41.18%), Postives = 138/238 (57.98%), Query Frame = 1 Query: 1 GMYGRSMLEI----AVGSGEV--HKLTPGDIVEAFARGK-------RGSIGK----GVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDAL 663 G G+S+LE+ AVG G++ H L GDI + K R SI K GVV K ++ + +A+D +EE+EV G + +I L+ND T+ RL + M + + QV + K+ + E ++ WH+ +N SQK AV L S+DV LIHGPPGTGKT T++ELI Q +DRG+R + SNI+VDN+V L + V++VR+GHPAR+ P VL HSLD L Sbjct: 59 GFGGKSLLELSLDPAVGVGDLPEHGLRVGDICAVAEQPKGAERKKERASIEKRAVEGVVTKVQKQAVTVALD--KEEVEVPNGK-LWLIKLANDVTYKRLSQTMSKLEKMQPSEHSILTQVLFGKSSPTSLSDAEIQKDLEWHDKTMNDSQKEAVRFALASRDVALIHGPPGTGKTHTLIELILQFLDRGQRALVCGPSNISVDNIVERLTSHKVSMVRLGHPARLLPSVLDHSLDVL 293
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: S4RW89_PETMA (Immunoglobulin mu DNA binding protein 2 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RW89_PETMA) HSP 1 Score: 140 bits (353), Expect = 7.570e-35 Identity = 95/245 (38.78%), Postives = 136/245 (55.51%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSGEV------HKLTPGDIVEAFARGK---RGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAM------RGFGVGR---VLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681 G+YGR +L+ A G + PGDIV + + + GVV + S + +A D + ++++ ++ L+ND T+ RL A+ G G+ VLFG T EP AP G++ + N L++SQ+ AV L ++V +IHGPPGTGKTTTVVE+I+Q V RGE+V+A A SN+AVDNLV LA AGV V+R+GHPAR+ V + LDA++A D Sbjct: 59 GLYGRQLLKFAARGGAPDSKLPSNDFGPGDIVGLYEGARDAVEAQLASGVVTRVSASAVTVAFDEAHDALDLKHDGPYSLLKLANDVTYKRLKTALTALNNHHGGPSGQMISVLFG----------TSEPS-APLAHTGQVEFLNTALDHSQREAVIFALAQREVAIIHGPPGTGKTTTVVEIIQQTVRRGEKVLACAPSNVAVDNLVERLACAGVRVLRLGHPARLLDSVRSRCLDAVLARGDD 292
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: UPI00140259DA (DNA-binding protein SMUBP-2 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140259DA) HSP 1 Score: 140 bits (353), Expect = 1.410e-34 Identity = 95/245 (38.78%), Postives = 136/245 (55.51%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSGEV------HKLTPGDIVEAFARGK---RGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAM------RGFGVGR---VLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681 G+YGR +L+ A G + PGDIV + + + GVV + S + +A D + ++++ ++ L+ND T+ RL A+ G G+ VLFG T EP AP G++ + N L++SQ+ AV L ++V +IHGPPGTGKTTTVVE+I+Q V RGE+V+A A SN+AVDNLV LA AGV V+R+GHPAR+ V + LDA++A D Sbjct: 56 GLYGRQLLKFAARGGAPDSKLPSNDFGPGDIVGLYEGARDAVEAQLASGVVTRVSASAVTVAFDEAHDALDLKHDGPYSLLKLANDVTYKRLKTALTALNNHHGGPSGQMISVLFG----------TSEPS-APLAHTGQVEFLNTALDHSQREAVIFALAQREVAIIHGPPGTGKTTTVVEIIQQTVRRGEKVLACAPSNVAVDNLVERLACAGVRVLRLGHPARLLDSVRSRCLDAVLARGDD 289
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A6J8A076_MYTCO (IGHMBP2 n=8 Tax=Mytilus TaxID=6548 RepID=A0A6J8A076_MYTCO) HSP 1 Score: 140 bits (352), Expect = 1.920e-34 Identity = 82/234 (35.04%), Postives = 135/234 (57.69%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSG----EVHKLTPGDIV---EAFARGKRGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681 G+YGR++L G H +T GDIV ++ + + S G G++ + S+ I +A D ++ +++ ++ L+ND T+ R+ A+ G + V ++ E + +PP E EI + N L+ SQK AV L ++ ++HGPPGTGKTTT++E+I Q V +G++++A A SNIAVDNLV LA+ +VR+GHPAR+ + +SLDA++++ D Sbjct: 53 GLYGRTILSFEASGGIKEFPSHNITSGDIVGLCQSSSDQQTDSAGSGIITRVSQTEINVAFDESQDLFSLDDDALYKLTKLANDVTYKRIKNALNRLSQGHSQPCSHLASVLFQ---ESELSPPLESKEIYYINSNLDESQKEAVRFALSQPEIAVVHGPPGTGKTTTIIEIIIQAVKQGKKILACAPSNIAVDNLVERLASNKQKIVRLGHPARVLKHIQKYSLDAILSTSDD 283
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A7J7QMT3_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QMT3_9CHLO) HSP 1 Score: 139 bits (349), Expect = 4.190e-34 Identity = 107/244 (43.85%), Postives = 148/244 (60.66%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSG---------EVHKLTPGDIV--EAFARGKRGS-IGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMR---GFGVGR---VLFGERVRQVAYEKTKEPQFAPPEELGEIAWH--NLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAG--VNVVRVGHPARMHPDVLAHSLDALV 666 G+ GR++L + G HK +P D+V +A + G G + G+V + + +V+A+D EE +E+ + R+ L+N+ T+ RL E ++ G G R +L G + V +++ +EP+FA AW N RL+ SQ+RAVE LR+QDV LIHGPPGTGKTT VVE+I Q V RG RV+A+AASNIAVDNLV LAAA V +VRVGHPAR+ P V+ SL+A V Sbjct: 176 GLLGRTLLTLVPNKGFRTTPAVPLPAHKFSPHDVVALKASSAGLGGPPLCTGLVCRVRDAALVVAVDDPPEE-GLEQPL--RLEKLANEVTYKRLQETLQQLSGPGTDRRAGLLPGMALVDVLFDR-REPRFA----AAAPAWKPVNARLDASQRRAVELALRAQDVALIHGPPGTGKTTAVVEVILQEVARGSRVLAAAASNIAVDNLVERLAAAAPKVKLVRVGHPARLLPQVIDKSLEAQV 411
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A1D1ZYC0_AUXPR (R3H domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZYC0_AUXPR) HSP 1 Score: 138 bits (348), Expect = 5.850e-34 Identity = 100/233 (42.92%), Postives = 128/233 (54.94%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSGE------VHKLTPGDIVEAFA-RGKRGS--IGKGVVQKASEERIVLAMDGEEEEIEVEEGMGV--RVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALV 666 G+ GRS+L + G VHK P DIV A + G+ + +GVV + ++ IV+A+D E+ G+ V R+ L N TH R+ A+ + V + + AP LG + W N L+ +Q+ AV L D+ LIHGPPGTGKTT VVE I Q V RG RV+A AASNIAVDNL LAAAGV VVRVGHPAR+ P VL SL+A V Sbjct: 207 GLLGRSLLTLVHNKGTPPGPLPVHKFGPHDIVRLRASKAAAGAPVLAEGVVYRLRDDSIVIAVDDTPED-----GLDVPLRLEKLVNTVTHTRMKAALNTLASASEHGSSPLIDVCFGRRPA---APATPLGPVQWTNASLDETQREAVCAALSCPDLALIHGPPGTGKTTAVVEAIVQEVGRGSRVLACAASNIAVDNLAERLAAAGVPVVRVGHPARLLPQVLDVSLEAKV 431
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: K1PTU1_CRAGI (DNA-binding protein SMUBP-2 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1PTU1_CRAGI) HSP 1 Score: 138 bits (348), Expect = 6.480e-34 Identity = 89/235 (37.87%), Postives = 132/235 (56.17%), Query Frame = 1 Query: 1 GMYGRSMLEIAVGSG----EVHKLTPGDIVEAFA----RGKRGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681 G YGR+++ G H +TPGDIV A +G G G G+V A + I +A D +E+ +++E ++ L+ND T+ RL A+ G R+ V + +T + P L +I N L+ SQ+ AV L +V ++HGPPGTGKTTTV+E+I Q + +G +++A A SNIAVDNLV LA VVR+GHPAR+ P + +SLDA+++S + Sbjct: 55 GFYGRTVVTFEPGGALQELPAHNITPGDIVSLTASSAHQGDEG-FGSGIVTHAGKSAISVAFDDKEDLYDLQEEDLYKLTKLANDVTYKRLKNALNNLKKGDFGGSSRLVDVLFGET---DLSSPYNLKDIHLVNSGLDESQEDAVRFALAQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPSNIAVDNLVERLAQHKQKVVRLGHPARVLPHIQKYSLDAILSSSEE 285 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92781.21460.1 >prot_M-pyrifera_M_contig92781.21460.1 ID=prot_M-pyrifera_M_contig92781.21460.1|Name=mRNA_M-pyrifera_M_contig92781.21460.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp MYGRSMLEIAVGSGEVHKLTPGDIVEAFARGKRGSIGKGVVQKASEERIVback to top mRNA from alignment at M-pyrifera_M_contig92781:41..721+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92781.21460.1 ID=mRNA_M-pyrifera_M_contig92781.21460.1|Name=mRNA_M-pyrifera_M_contig92781.21460.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=681bp|location=Sequence derived from alignment at M-pyrifera_M_contig92781:41..721+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92781:41..721+ >mRNA_M-pyrifera_M_contig92781.21460.1 ID=mRNA_M-pyrifera_M_contig92781.21460.1|Name=mRNA_M-pyrifera_M_contig92781.21460.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig92781:41..721+ (Macrocystis pyrifera P11B4 male)back to top |