mRNA_M-pyrifera_M_contig92781.21460.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92781.21460.1
Unique NamemRNA_M-pyrifera_M_contig92781.21460.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A8B8DJH6_CRAVI (DNA-binding protein SMUBP-2-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DJH6_CRAVI)

HSP 1 Score: 147 bits (370), Expect = 7.360e-37
Identity = 90/234 (38.46%), Postives = 136/234 (58.12%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSGE----VHKLTPGDIVEAFARGKRG---SIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681
            G YGR+++    G G      H LTPGDIV   A   +    S+G G+V  A +  I +A D +E+  +++E    ++  L+ND T+ RL  A+     G      ++  V +    E + +PP +L +I   N  L+ SQ+ AV+  L   +V ++HGPPGTGKTTTV+E+I Q + +G +++A A SNIAVDNLV  LA     VVR+GHPAR+ P +  +SLDA+++S  +
Sbjct:   55 GFYGRTVVTFEPGGGSQELPAHNLTPGDIVSLNASSSQQENESLGSGIVTHAGKSAISVAFDEKEDLFDLKEEDHYKLTKLANDVTYKRLKNALNNLRKGDFGKSSKLVNVLFG---EAELSPPFDLKDIHLVNTGLDESQEDAVKFALSQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPSNIAVDNLVERLALNKQRVVRLGHPARVLPHIQKYSLDAILSSSEE 285          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A267G3D9_9PLAT (AN1-type domain-containing protein (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267G3D9_9PLAT)

HSP 1 Score: 146 bits (368), Expect = 1.400e-36
Identity = 99/247 (40.08%), Postives = 135/247 (54.66%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSGEV----HKLTPGDIVEAF-ARGKRGSIGKGVVQKASEERIVLAMDGEEEEI-------EVEEGMGVRVICLSNDATHVRLVEAMRGF-----GVGRVLFGERVRQVAYE---KTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681
            GMYGR +LE            H + PGDIV  F ++ ++  IG G+V K     + +AM+ ++          ++E G    V+ L +D T  RL + +         +  +L GER      +    + E   A     G +++ N  L+ SQ+ AVE GLR  D+ +IHGPPGTGKTTTVVEL+RQ V RGER++  A SN AVDNL   L A+GV  VR+GHPAR  P V+ HSLDAL+A   D
Sbjct:   59 GMYGRRVLEFETYQRAKDLPSHSIAPGDIVGIFHSQQEQQQIGSGIVTKVLARAVCVAMETDQASSAASSGDGQLEVGYKYSVVKLGSDVTFKRLKKGLLALLQKPPSLADLLLGERSLAPTRDLPPPSGESTAASGSSRG-VSYFNPHLDESQRAAVELGLRRSDLVMIHGPPGTGKTTTVVELVRQLVARGERLLCCAPSNTAVDNLAERLIASGVRCVRLGHPARQLPQVVEHSLDALLARSED 304          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A267GB73_9PLAT (AN1-type domain-containing protein (Fragment) n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GB73_9PLAT)

HSP 1 Score: 146 bits (368), Expect = 1.400e-36
Identity = 99/247 (40.08%), Postives = 135/247 (54.66%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSGEV----HKLTPGDIVEAF-ARGKRGSIGKGVVQKASEERIVLAMDGEEEEI-------EVEEGMGVRVICLSNDATHVRLVEAMRGF-----GVGRVLFGERVRQVAYE---KTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681
            GMYGR +LE            H + PGDIV  F ++ ++  IG G+V K     + +AM+ ++          ++E G    V+ L +D T  RL + +         +  +L GER      +    + E   A     G +++ N  L+ SQ+ AVE GLR  D+ +IHGPPGTGKTTTVVEL+RQ V RGER++  A SN AVDNL   L A+GV  VR+GHPAR  P V+ HSLDAL+A   D
Sbjct:   47 GMYGRRVLEFETYQRAKDLPSHSIAPGDIVGIFHSQQEQQQIGSGIVTKVLARAVCVAMETDQASSAASSGDGQLEVGYKYSVVKLGSDVTFKRLKKGLLALLQKPPSLADLLLGERSLAPTRDLPPPSGESTAASGSSRG-VSYFNPHLDESQRAAVELGLRRSDLVMIHGPPGTGKTTTVVELVRQLVARGERLLCCAPSNTAVDNLAERLIASGVRCVRLGHPARQLPQVVEHSLDALLARSED 292          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: M2NIT9_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2NIT9_BAUPA)

HSP 1 Score: 144 bits (363), Expect = 4.260e-36
Identity = 98/238 (41.18%), Postives = 138/238 (57.98%), Query Frame = 1
Query:    1 GMYGRSMLEI----AVGSGEV--HKLTPGDIVEAFARGK-------RGSIGK----GVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDAL 663
            G  G+S+LE+    AVG G++  H L  GDI     + K       R SI K    GVV K  ++ + +A+D  +EE+EV  G  + +I L+ND T+ RL + M      +      + QV + K+     +  E   ++ WH+  +N SQK AV   L S+DV LIHGPPGTGKT T++ELI Q +DRG+R +    SNI+VDN+V  L +  V++VR+GHPAR+ P VL HSLD L
Sbjct:   59 GFGGKSLLELSLDPAVGVGDLPEHGLRVGDICAVAEQPKGAERKKERASIEKRAVEGVVTKVQKQAVTVALD--KEEVEVPNGK-LWLIKLANDVTYKRLSQTMSKLEKMQPSEHSILTQVLFGKSSPTSLSDAEIQKDLEWHDKTMNDSQKEAVRFALASRDVALIHGPPGTGKTHTLIELILQFLDRGQRALVCGPSNISVDNIVERLTSHKVSMVRLGHPARLLPSVLDHSLDVL 293          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: S4RW89_PETMA (Immunoglobulin mu DNA binding protein 2 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RW89_PETMA)

HSP 1 Score: 140 bits (353), Expect = 7.570e-35
Identity = 95/245 (38.78%), Postives = 136/245 (55.51%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSGEV------HKLTPGDIVEAFARGK---RGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAM------RGFGVGR---VLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681
            G+YGR +L+ A   G        +   PGDIV  +   +      +  GVV + S   + +A D   + ++++      ++ L+ND T+ RL  A+       G   G+   VLFG          T EP  AP    G++ + N  L++SQ+ AV   L  ++V +IHGPPGTGKTTTVVE+I+Q V RGE+V+A A SN+AVDNLV  LA AGV V+R+GHPAR+   V +  LDA++A   D
Sbjct:   59 GLYGRQLLKFAARGGAPDSKLPSNDFGPGDIVGLYEGARDAVEAQLASGVVTRVSASAVTVAFDEAHDALDLKHDGPYSLLKLANDVTYKRLKTALTALNNHHGGPSGQMISVLFG----------TSEPS-APLAHTGQVEFLNTALDHSQREAVIFALAQREVAIIHGPPGTGKTTTVVEIIQQTVRRGEKVLACAPSNVAVDNLVERLACAGVRVLRLGHPARLLDSVRSRCLDAVLARGDD 292          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: UPI00140259DA (DNA-binding protein SMUBP-2 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI00140259DA)

HSP 1 Score: 140 bits (353), Expect = 1.410e-34
Identity = 95/245 (38.78%), Postives = 136/245 (55.51%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSGEV------HKLTPGDIVEAFARGK---RGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAM------RGFGVGR---VLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681
            G+YGR +L+ A   G        +   PGDIV  +   +      +  GVV + S   + +A D   + ++++      ++ L+ND T+ RL  A+       G   G+   VLFG          T EP  AP    G++ + N  L++SQ+ AV   L  ++V +IHGPPGTGKTTTVVE+I+Q V RGE+V+A A SN+AVDNLV  LA AGV V+R+GHPAR+   V +  LDA++A   D
Sbjct:   56 GLYGRQLLKFAARGGAPDSKLPSNDFGPGDIVGLYEGARDAVEAQLASGVVTRVSASAVTVAFDEAHDALDLKHDGPYSLLKLANDVTYKRLKTALTALNNHHGGPSGQMISVLFG----------TSEPS-APLAHTGQVEFLNTALDHSQREAVIFALAQREVAIIHGPPGTGKTTTVVEIIQQTVRRGEKVLACAPSNVAVDNLVERLACAGVRVLRLGHPARLLDSVRSRCLDAVLARGDD 289          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A6J8A076_MYTCO (IGHMBP2 n=8 Tax=Mytilus TaxID=6548 RepID=A0A6J8A076_MYTCO)

HSP 1 Score: 140 bits (352), Expect = 1.920e-34
Identity = 82/234 (35.04%), Postives = 135/234 (57.69%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSG----EVHKLTPGDIV---EAFARGKRGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681
            G+YGR++L      G      H +T GDIV   ++ +  +  S G G++ + S+  I +A D  ++   +++    ++  L+ND T+ R+  A+     G       +  V ++   E + +PP E  EI + N  L+ SQK AV   L   ++ ++HGPPGTGKTTT++E+I Q V +G++++A A SNIAVDNLV  LA+    +VR+GHPAR+   +  +SLDA++++  D
Sbjct:   53 GLYGRTILSFEASGGIKEFPSHNITSGDIVGLCQSSSDQQTDSAGSGIITRVSQTEINVAFDESQDLFSLDDDALYKLTKLANDVTYKRIKNALNRLSQGHSQPCSHLASVLFQ---ESELSPPLESKEIYYINSNLDESQKEAVRFALSQPEIAVVHGPPGTGKTTTIIEIIIQAVKQGKKILACAPSNIAVDNLVERLASNKQKIVRLGHPARVLKHIQKYSLDAILSTSDD 283          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A7J7QMT3_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QMT3_9CHLO)

HSP 1 Score: 139 bits (349), Expect = 4.190e-34
Identity = 107/244 (43.85%), Postives = 148/244 (60.66%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSG---------EVHKLTPGDIV--EAFARGKRGS-IGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMR---GFGVGR---VLFGERVRQVAYEKTKEPQFAPPEELGEIAWH--NLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAG--VNVVRVGHPARMHPDVLAHSLDALV 666
            G+ GR++L +    G           HK +P D+V  +A + G  G  +  G+V +  +  +V+A+D   EE  +E+ +  R+  L+N+ T+ RL E ++   G G  R   +L G  +  V +++ +EP+FA        AW   N RL+ SQ+RAVE  LR+QDV LIHGPPGTGKTT VVE+I Q V RG RV+A+AASNIAVDNLV  LAAA   V +VRVGHPAR+ P V+  SL+A V
Sbjct:  176 GLLGRTLLTLVPNKGFRTTPAVPLPAHKFSPHDVVALKASSAGLGGPPLCTGLVCRVRDAALVVAVDDPPEE-GLEQPL--RLEKLANEVTYKRLQETLQQLSGPGTDRRAGLLPGMALVDVLFDR-REPRFA----AAAPAWKPVNARLDASQRRAVELALRAQDVALIHGPPGTGKTTAVVEVILQEVARGSRVLAAAASNIAVDNLVERLAAAAPKVKLVRVGHPARLLPQVIDKSLEAQV 411          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: A0A1D1ZYC0_AUXPR (R3H domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZYC0_AUXPR)

HSP 1 Score: 138 bits (348), Expect = 5.850e-34
Identity = 100/233 (42.92%), Postives = 128/233 (54.94%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSGE------VHKLTPGDIVEAFA-RGKRGS--IGKGVVQKASEERIVLAMDGEEEEIEVEEGMGV--RVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALV 666
            G+ GRS+L +    G       VHK  P DIV   A +   G+  + +GVV +  ++ IV+A+D   E+     G+ V  R+  L N  TH R+  A+             +  V + +      AP   LG + W N  L+ +Q+ AV   L   D+ LIHGPPGTGKTT VVE I Q V RG RV+A AASNIAVDNL   LAAAGV VVRVGHPAR+ P VL  SL+A V
Sbjct:  207 GLLGRSLLTLVHNKGTPPGPLPVHKFGPHDIVRLRASKAAAGAPVLAEGVVYRLRDDSIVIAVDDTPED-----GLDVPLRLEKLVNTVTHTRMKAALNTLASASEHGSSPLIDVCFGRRPA---APATPLGPVQWTNASLDETQREAVCAALSCPDLALIHGPPGTGKTTAVVEAIVQEVGRGSRVLACAASNIAVDNLAERLAAAGVPVVRVGHPARLLPQVLDVSLEAKV 431          
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Match: K1PTU1_CRAGI (DNA-binding protein SMUBP-2 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1PTU1_CRAGI)

HSP 1 Score: 138 bits (348), Expect = 6.480e-34
Identity = 89/235 (37.87%), Postives = 132/235 (56.17%), Query Frame = 1
Query:    1 GMYGRSMLEIAVGSG----EVHKLTPGDIVEAFA----RGKRGSIGKGVVQKASEERIVLAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERVRQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIHGPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVVRVGHPARMHPDVLAHSLDALVASERD 681
            G YGR+++    G        H +TPGDIV   A    +G  G  G G+V  A +  I +A D +E+  +++E    ++  L+ND T+ RL  A+     G      R+  V + +T     + P  L +I   N  L+ SQ+ AV   L   +V ++HGPPGTGKTTTV+E+I Q + +G +++A A SNIAVDNLV  LA     VVR+GHPAR+ P +  +SLDA+++S  +
Sbjct:   55 GFYGRTVVTFEPGGALQELPAHNITPGDIVSLTASSAHQGDEG-FGSGIVTHAGKSAISVAFDDKEDLYDLQEEDLYKLTKLANDVTYKRLKNALNNLKKGDFGGSSRLVDVLFGET---DLSSPYNLKDIHLVNSGLDESQEDAVRFALAQPEVAIVHGPPGTGKTTTVIEIIIQAIKQGNKILACAPSNIAVDNLVERLAQHKQKVVRLGHPARVLPHIQKYSLDAILSSSEE 285          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92781.21460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8B8DJH6_CRAVI7.360e-3738.46DNA-binding protein SMUBP-2-like n=1 Tax=Crassostr... [more]
A0A267G3D9_9PLAT1.400e-3640.08AN1-type domain-containing protein (Fragment) n=3 ... [more]
A0A267GB73_9PLAT1.400e-3640.08AN1-type domain-containing protein (Fragment) n=4 ... [more]
M2NIT9_BAUPA4.260e-3641.18Uncharacterized protein n=1 Tax=Baudoinia panameri... [more]
S4RW89_PETMA7.570e-3538.78Immunoglobulin mu DNA binding protein 2 n=1 Tax=Pe... [more]
UPI00140259DA1.410e-3438.78DNA-binding protein SMUBP-2 isoform X1 n=2 Tax=Pet... [more]
A0A6J8A076_MYTCO1.920e-3435.04IGHMBP2 n=8 Tax=Mytilus TaxID=6548 RepID=A0A6J8A07... [more]
A0A7J7QMT3_9CHLO4.190e-3443.85P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1D1ZYC0_AUXPR5.850e-3442.92R3H domain-containing protein n=3 Tax=Auxenochlore... [more]
K1PTU1_CRAGI6.480e-3437.87DNA-binding protein SMUBP-2 n=2 Tax=Crassostrea gi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92781contigM-pyrifera_M_contig92781:41..721 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score141.7
Seed ortholog evalue4.1e-31
Seed eggNOG ortholog430998.XP_007673547.1
KEGG koko:K19783
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000278,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022616,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033203,GO:0033260,GO:0034641,GO:0034645,GO:0042623,GO:0043139,GO:0043141,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0046483,GO:0051276,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576,GO:1902296,GO:1902319,GO:1902494,GO:1902969,GO:1902983,GO:1903047,GO:1903459
EggNOG free text desc.Uncharacterized conserved protein (DUF2075)
EggNOG OGs200CT@147541,38E4S@33154,3MHAS@451867,3NXAX@4751,3QJXR@4890,COG1112@1,KOG1803@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Exons1
Model size681
Cds size678
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.9931622-UTR-M-pyrifera_M_contig92781:40..431622816840.9931622-UTR-M-pyrifera_M_contig92781:40..43Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92781 41..43 +
1692278209.7644236-UTR-M-pyrifera_M_contig92781:40..431692278209.7644236-UTR-M-pyrifera_M_contig92781:40..43Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92781 41..43 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816841.0055115-CDS-M-pyrifera_M_contig92781:43..7211622816841.0055115-CDS-M-pyrifera_M_contig92781:43..721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92781 44..721 +
1692278209.7830741-CDS-M-pyrifera_M_contig92781:43..7211692278209.7830741-CDS-M-pyrifera_M_contig92781:43..721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92781 44..721 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92781.21460.1prot_M-pyrifera_M_contig92781.21460.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92781 44..721 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92781.21460.1

>prot_M-pyrifera_M_contig92781.21460.1 ID=prot_M-pyrifera_M_contig92781.21460.1|Name=mRNA_M-pyrifera_M_contig92781.21460.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
MYGRSMLEIAVGSGEVHKLTPGDIVEAFARGKRGSIGKGVVQKASEERIV
LAMDGEEEEIEVEEGMGVRVICLSNDATHVRLVEAMRGFGVGRVLFGERV
RQVAYEKTKEPQFAPPEELGEIAWHNLRLNYSQKRAVECGLRSQDVFLIH
GPPGTGKTTTVVELIRQCVDRGERVMASAASNIAVDNLVMLLAAAGVNVV
RVGHPARMHPDVLAHSLDALVASERD
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mRNA from alignment at M-pyrifera_M_contig92781:41..721+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92781.21460.1 ID=mRNA_M-pyrifera_M_contig92781.21460.1|Name=mRNA_M-pyrifera_M_contig92781.21460.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=681bp|location=Sequence derived from alignment at M-pyrifera_M_contig92781:41..721+ (Macrocystis pyrifera P11B4 male)
GGTATGTATGGTCGTAGTATGTTGGAAATTGCGGTAGGGTCTGGAGAAGT ACACAAATTGACGCCAGGAGACATTGTGGAAGCCTTTGCGCGTGGCAAGC GTGGAAGTATTGGAAAAGGAGTGGTGCAAAAGGCGTCTGAGGAGAGGATT GTTCTAGCAATGGATGGGGAAGAGGAAGAGATAGAGGTGGAGGAAGGTAT GGGGGTGAGGGTGATTTGTTTATCCAATGATGCCACCCATGTACGTTTGG TGGAAGCTATGCGTGGGTTTGGAGTAGGGAGAGTATTGTTTGGTGAGAGA GTGCGGCAGGTAGCATATGAAAAGACGAAAGAACCGCAGTTTGCTCCACC TGAAGAGTTGGGTGAAATTGCATGGCACAATTTGCGTTTGAATTATTCAC AAAAGCGTGCAGTGGAGTGTGGGTTGCGCTCACAAGATGTGTTCTTAATT CATGGTCCTCCTGGGACAGGAAAGACTACCACAGTTGTTGAGTTGATTCG TCAATGTGTTGATCGAGGTGAGCGTGTGATGGCGAGTGCAGCATCCAACA TTGCAGTGGACAATCTTGTGATGCTCCTTGCTGCTGCTGGTGTGAATGTT GTACGTGTAGGACATCCAGCAAGAATGCATCCTGATGTCCTTGCACACTC TCTCGATGCACTAGTTGCATCTGAACGCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92781:41..721+

>mRNA_M-pyrifera_M_contig92781.21460.1 ID=mRNA_M-pyrifera_M_contig92781.21460.1|Name=mRNA_M-pyrifera_M_contig92781.21460.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig92781:41..721+ (Macrocystis pyrifera P11B4 male)
ATGTATGGTCGTAGTATGTTGGAAATTGCGGTAGGGTCTGGAGAAGTACA
CAAATTGACGCCAGGAGACATTGTGGAAGCCTTTGCGCGTGGCAAGCGTG
GAAGTATTGGAAAAGGAGTGGTGCAAAAGGCGTCTGAGGAGAGGATTGTT
CTAGCAATGGATGGGGAAGAGGAAGAGATAGAGGTGGAGGAAGGTATGGG
GGTGAGGGTGATTTGTTTATCCAATGATGCCACCCATGTACGTTTGGTGG
AAGCTATGCGTGGGTTTGGAGTAGGGAGAGTATTGTTTGGTGAGAGAGTG
CGGCAGGTAGCATATGAAAAGACGAAAGAACCGCAGTTTGCTCCACCTGA
AGAGTTGGGTGAAATTGCATGGCACAATTTGCGTTTGAATTATTCACAAA
AGCGTGCAGTGGAGTGTGGGTTGCGCTCACAAGATGTGTTCTTAATTCAT
GGTCCTCCTGGGACAGGAAAGACTACCACAGTTGTTGAGTTGATTCGTCA
ATGTGTTGATCGAGGTGAGCGTGTGATGGCGAGTGCAGCATCCAACATTG
CAGTGGACAATCTTGTGATGCTCCTTGCTGCTGCTGGTGTGAATGTTGTA
CGTGTAGGACATCCAGCAAGAATGCATCCTGATGTCCTTGCACACTCTCT
CGATGCACTAGTTGCATCTGAACGCGATATGTATGGTCGTAGTATGTTGG
AAATTGCGGTAGGGTCTGGAGAAGTACACAAATTGACGCCAGGAGACATT
GTGGAAGCCTTTGCGCGTGGCAAGCGTGGAAGTATTGGAAAAGGAGTGGT
GCAAAAGGCGTCTGAGGAGAGGATTGTTCTAGCAATGGATGGGGAAGAGG
AAGAGATAGAGGTGGAGGAAGGTATGGGGGTGAGGGTGATTTGTTTATCC
AATGATGCCACCCATGTACGTTTGGTGGAAGCTATGCGTGGGTTTGGAGT
AGGGAGAGTATTGTTTGGTGAGAGAGTGCGGCAGGTAGCATATGAAAAGA
CGAAAGAACCGCAGTTTGCTCCACCTGAAGAGTTGGGTGAAATTGCATGG
CACAATTTGCGTTTGAATTATTCACAAAAGCGTGCAGTGGAGTGTGGGTT
GCGCTCACAAGATGTGTTCTTAATTCATGGTCCTCCTGGGACAGGAAAGA
CTACCACAGTTGTTGAGTTGATTCGTCAATGTGTTGATCGAGGTGAGCGT
GTGATGGCGAGTGCAGCATCCAACATTGCAGTGGACAATCTTGTGATGCT
CCTTGCTGCTGCTGGTGTGAATGTTGTACGTGTAGGACATCCAGCAAGAA
TGCATCCTGATGTCCTTGCACACTCTCTCGATGCACTAGTTGCATCTGAA
CGCGAT
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