mRNA_M-pyrifera_M_contig92755.21452.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92755.21452.1
Unique NamemRNA_M-pyrifera_M_contig92755.21452.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A507FIG1_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FIG1_9FUNG)

HSP 1 Score: 155 bits (391), Expect = 2.390e-42
Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 1 
Query:    7 MADTEQRIVDEYLGLVERSQQLFSGLRDVPHLGKQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            +A +  +IV+E+  L+E+SQQLF+GLRD+P  GK WQPYFQ+TFEVYTKLWKFQQ  R VLENKD YGLKR+EIGEIASKIGQLYYHYYLRTSETNYL
Sbjct:   31 VAHSNAKIVEEFQYLLEKSQQLFAGLRDLPPTGKNWQPYFQRTFEVYTKLWKFQQTHRLVLENKDLYGLKRYEIGEIASKIGQLYYHYYLRTSETNYL 128
[Close]
BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A1Y2BKE9_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BKE9_9FUNG)

HSP 1 Score: 154 bits (389), Expect = 5.230e-42
Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 1 
Query:   10 ADTEQRIVDEYLGLVERSQQLFSGLRDVPHLGKQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            A+   +IV+E+  L+E+SQQLF+GLRD+P  GK WQPYFQ+TFEVYTKLWKFQQ  R VLENKD YGLKR+EIGEIASKIGQLYYHYYLRTSETNYL
Sbjct:   32 ANPNAKIVEEFQYLLEKSQQLFAGLRDLPPTGKNWQPYFQRTFEVYTKLWKFQQSHRLVLENKDLYGLKRYEIGEIASKIGQLYYHYYLRTSETNYL 128
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BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A015LBF7_RHIIW (Uncharacterized protein n=11 Tax=Glomeraceae TaxID=36751 RepID=A0A015LBF7_RHIIW)

HSP 1 Score: 152 bits (383), Expect = 4.810e-41
Identity = 77/101 (76.24%), Postives = 86/101 (85.15%), Query Frame = 1 
Query:    1 AAMADTEQRIVDEYLGLVERSQQLFSGLRDVPHLG-KQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            A  A   QRIV+E+  L+E+SQQLF+GLRD+P  G +QWQPYFQ+TFEVYTKLWKFQQ  R VLENKD YGLKR E+GEIASKIGQLYYHYYLRTSETNYL
Sbjct:   55 ATTAMNNQRIVEEFQYLLEKSQQLFAGLRDLPPTGGRQWQPYFQRTFEVYTKLWKFQQQNRFVLENKDNYGLKRWEVGEIASKIGQLYYHYYLRTSETNYL 155
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BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A507DMM5_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DMM5_9FUNG)

HSP 1 Score: 151 bits (381), Expect = 9.960e-41
Identity = 71/100 (71.00%), Postives = 86/100 (86.00%), Query Frame = 1 
Query:    1 AAMADTEQRIVDEYLGLVERSQQLFSGLRDVPHLGKQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            A +   + ++V+E+L L+E+SQQLF+GLRD+P  G+ WQPYFQ+TFEVYTKLWK+QQ  R +LENKD YGLKR EIGE+ASKIGQLYYHYYLRTSETNYL
Sbjct:   43 AHLLPDQAKVVEEFLFLLEKSQQLFAGLRDLPPTGRNWQPYFQRTFEVYTKLWKYQQQHRSMLENKDAYGLKRWEIGEVASKIGQLYYHYYLRTSETNYL 142
[Close]
BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A397G1B2_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G1B2_9GLOM)

HSP 1 Score: 150 bits (378), Expect = 2.630e-40
Identity = 74/98 (75.51%), Postives = 85/98 (86.73%), Query Frame = 1 
Query:   10 ADTEQRIVDEYLGLVERSQQLFSGLRDVPHLG-KQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            A   Q+IV+E+  L+E+SQQLF+GLRD+P  G +QWQPYFQ+TFEVYTKLWKFQQ  R +LENKD YGLKR E+GEIASKIGQLYYHYYLRTSETNYL
Sbjct:   57 ATNNQKIVEEFQYLLEKSQQLFAGLRDLPPTGGRQWQPYFQRTFEVYTKLWKFQQQNRFILENKDNYGLKRWEVGEIASKIGQLYYHYYLRTSETNYL 154
[Close]
BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A7S3DDY2_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DDY2_9EUKA)

HSP 1 Score: 149 bits (376), Expect = 2.830e-40
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 1 
Query:    7 MADTEQRIVDEYLGLVERSQQLFSGLRDVPHLGKQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            +A+ E+ IV E+L LVE+SQQ FSGLRD+P  G++WQ YF KTFEV+TKLW+FQQ +R VLENK+ YGLKR E+G+IASKIGQLYYHYYLRTSETNYL
Sbjct:   29 IANEEKAIVQEFLSLVEKSQQFFSGLRDLPAYGREWQTYFTKTFEVFTKLWRFQQEKRKVLENKENYGLKRWEVGDIASKIGQLYYHYYLRTSETNYL 126
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BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A1S8W7J8_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium TaxID=100474 RepID=A0A1S8W7J8_9FUNG)

HSP 1 Score: 149 bits (376), Expect = 2.940e-40
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 1 
Query:   16 TEQRIVDEYLGLVERSQQLFSGLRDVPHLGKQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            + Q+IV+E+  L+E+SQQLF+GLRD+P  G+ WQPYFQ+TFEVYTK+WKFQQ  R VL+NK+ YGLKR EIGE+ASKIGQLYYHYYLRTSETNYL
Sbjct:   27 SSQKIVEEFQYLLEKSQQLFAGLRDLPPTGRNWQPYFQRTFEVYTKIWKFQQTYRSVLDNKEYYGLKRWEIGELASKIGQLYYHYYLRTSETNYL 121
[Close]
BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A397UIF2_9GLOM (Protein SCAI n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UIF2_9GLOM)

HSP 1 Score: 149 bits (376), Expect = 3.590e-40
Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 1 
Query:   19 EQRIVDEYLGLVERSQQLFSGLRDVPHLG-KQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            +QRIV+E+  L+E+SQQLF+GLRD+P  G +QWQPYFQ+TFEVYTKLWKFQQ  R VLENK+ YGLKR E+GEIASKIGQLYYHYYLRTSETNYL
Sbjct:   28 DQRIVEEFQYLLEKSQQLFAGLRDLPPTGGRQWQPYFQRTFEVYTKLWKFQQQNRFVLENKNNYGLKRWEVGEIASKIGQLYYHYYLRTSETNYL 122
[Close]
BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A0L0HLS2_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLS2_SPIPD)

HSP 1 Score: 148 bits (374), Expect = 7.360e-40
Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = 1 
Query:   10 ADTEQRIVDEYLGLVERSQQLFSGLRDVPHLGKQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            AD    I  E+  LVE+SQQLF+GLRDVP  G+ WQPYFQ+TFEVY KLWKFQQ+ R +LENK+ YGLKR EIGE+ASKIGQLYYHYYLRTSETNYL
Sbjct:   35 ADPNVVIAQEFQYLVEKSQQLFAGLRDVPPTGRNWQPYFQRTFEVYQKLWKFQQMHRSILENKEYYGLKRWEIGEVASKIGQLYYHYYLRTSETNYL 131
[Close]
BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Match: A0A1Y1YZS4_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YZS4_9FUNG)

HSP 1 Score: 148 bits (373), Expect = 9.230e-40
Identity = 72/94 (76.60%), Postives = 84/94 (89.36%), Query Frame = 1 
Query:   22 QRIVDEYLGLVERSQQLFSGLRDV-PHLGKQWQPYFQKTFEVYTKLWKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL 300
            QRIV+E+  L+E+SQQLF+GLR++ P  G+QWQPYFQ+TFE+YTKLWKFQQ  R VLENKD YGLKR E+GE+ASKIGQLYYHYYLRTSETNYL
Sbjct:   43 QRIVEEFQYLLEKSQQLFAGLRELSPTGGRQWQPYFQRTFEIYTKLWKFQQQHRAVLENKDNYGLKRWEVGEVASKIGQLYYHYYLRTSETNYL 136
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92755.21452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A507FIG1_9FUNG2.390e-4276.53Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
A0A1Y2BKE9_9FUNG5.230e-4277.32Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
A0A015LBF7_RHIIW4.810e-4176.24Uncharacterized protein n=11 Tax=Glomeraceae TaxID... [more]
A0A507DMM5_9FUNG9.960e-4171.00Uncharacterized protein n=2 Tax=Synchytrium endobi... [more]
A0A397G1B2_9GLOM2.630e-4075.51Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A7S3DDY2_9EUKA2.830e-4072.45Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A1S8W7J8_9FUNG2.940e-4073.68Uncharacterized protein n=3 Tax=Batrachochytrium T... [more]
A0A397UIF2_9GLOM3.590e-4077.89Protein SCAI n=2 Tax=Gigaspora TaxID=4873 RepID=A0... [more]
A0A0L0HLS2_SPIPD7.360e-4074.23Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A1Y1YZS4_9FUNG9.230e-4076.60Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92755contigM-pyrifera_M_contig92755:303..761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score151.4
Seed ortholog evalue2.2e-34
Seed eggNOG ortholog109871.XP_006675726.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein SCAI
EggNOG OGs2CMAJ@1,2QPT4@2759,39S1H@33154,3NWFA@4751
COG Functional cat.S
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons3
Model size300
Cds size294
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92755.21452.1prot_M-pyrifera_M_contig92755.21452.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92755 309..761 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.5631466-UTR-M-pyrifera_M_contig92755:302..3081622816840.5631466-UTR-M-pyrifera_M_contig92755:302..308Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92755 303..308 +
1692278209.4807932-UTR-M-pyrifera_M_contig92755:302..3081692278209.4807932-UTR-M-pyrifera_M_contig92755:302..308Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92755 303..308 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.5747175-CDS-M-pyrifera_M_contig92755:308..3881622816840.5747175-CDS-M-pyrifera_M_contig92755:308..388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92755 309..388 +
1692278209.4932365-CDS-M-pyrifera_M_contig92755:308..3881692278209.4932365-CDS-M-pyrifera_M_contig92755:308..388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92755 309..388 +
1622816840.5854878-CDS-M-pyrifera_M_contig92755:448..6341622816840.5854878-CDS-M-pyrifera_M_contig92755:448..634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92755 449..634 +
1692278209.5039434-CDS-M-pyrifera_M_contig92755:448..6341692278209.5039434-CDS-M-pyrifera_M_contig92755:448..634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92755 449..634 +
1622816840.5961292-CDS-M-pyrifera_M_contig92755:733..7611622816840.5961292-CDS-M-pyrifera_M_contig92755:733..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92755 734..761 +
1692278209.5130696-CDS-M-pyrifera_M_contig92755:733..7611692278209.5130696-CDS-M-pyrifera_M_contig92755:733..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92755 734..761 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92755.21452.1

>prot_M-pyrifera_M_contig92755.21452.1 ID=prot_M-pyrifera_M_contig92755.21452.1|Name=mRNA_M-pyrifera_M_contig92755.21452.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
MADTEQRIVDEYLGLVERSQQLFSGLRDVPHLGKQWQPYFQKTFEVYTKL
WKFQQIQRPVLENKDRYGLKRHEIGEIASKIGQLYYHYYLRTSETNYL
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mRNA from alignment at M-pyrifera_M_contig92755:303..761+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92755.21452.1 ID=mRNA_M-pyrifera_M_contig92755.21452.1|Name=mRNA_M-pyrifera_M_contig92755.21452.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig92755:303..761+ (Macrocystis pyrifera P11B4 male)
GCAGCAATGGCTGACACCGAGCAACGCATTGTGGACGAGTACCTGGGCCT
AGTGGAGCGGTCACAGCAGCTCTTCTCGGGGCTAAGGTGAGGTCACTGCT
GCGCTGCGTCTGTGCCGCGTGCGGAGCGGAGCCTGACGGTCTGCAGGGAT
GTACCGCACCTGGGAAAGCAATGGCAGCCCTACTTCCAGAAGACCTTTGA
GGTGTACACCAAGCTGTGGAAGTTCCAGCAAATCCAGCGGCCAGTGCTGG
AGAACAAGGACCGCTACGGCCTCAAGCGCCACGAGATTGGCGAAATCGCC
TCCAAGATCGGCCAGCTCTACTACCACTACTAGTGCGCCACCTTCTCAGC
TCCTCGCCGCCTCCAGTCCCCTCTCCCTGCGAAGTGGGGGAGTGTCGAGT
GTCGGCCCCCGATCTAACAGCGAGGCCGCAGCTTGCGCACAAGCGAGACC
AACTACCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92755:303..761+

>mRNA_M-pyrifera_M_contig92755.21452.1 ID=mRNA_M-pyrifera_M_contig92755.21452.1|Name=mRNA_M-pyrifera_M_contig92755.21452.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig92755:303..761+ (Macrocystis pyrifera P11B4 male)
ATGGCTGACACCGAGCAACGCATTGTGGACGAGTACCTGGGCCTAGTGGA
GCGGTCACAGCAGCTCTTCTCGGGGCTAAGATGGCTGACACCGAGCAACG
CATTGTGGACGAGTACCTGGGCCTAGTGGAGCGGTCACAGCAGCTCTTCT
CGGGGCTAAGGGATGTACCGCACCTGGGAAAGCAATGGCAGCCCTACTTC
CAGAAGACCTTTGAGGTGTACACCAAGCTGTGGAAGTTCCAGCAAATCCA
GCGGCCAGTGCTGGAGAACAAGGACCGCTACGGCCTCAAGCGCCACGAGA
TTGGCGAAATCGCCTCCAAGATCGGCCAGCTCTACTACCACTACTAGGAT
GTACCGCACCTGGGAAAGCAATGGCAGCCCTACTTCCAGAAGACCTTTGA
GGTGTACACCAAGCTGTGGAAGTTCCAGCAAATCCAGCGGCCAGTGCTGG
AGAACAAGGACCGCTACGGCCTCAAGCGCCACGAGATTGGCGAAATCGCC
TCCAAGATCGGCCAGCTCTACTACCACTACTACTTGCGCACAAGCGAGAC
CAACTACCTCCTTGCGCACAAGCGAGACCAACTACCTC
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