mRNA_M-pyrifera_M_contig92710.21448.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92710.21448.1
Unique NamemRNA_M-pyrifera_M_contig92710.21448.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A3D5DCB3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCB3_9GAMM)

HSP 1 Score: 473 bits (1216), Expect = 1.090e-165
Identity = 222/253 (87.75%), Postives = 238/253 (94.07%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGPTVGRLMAE+GA+I KIEIAPGGDPSRGLP  DDGRSGYFIQQNRGKKSL L+LKKPESD ILRELI  VDVVIENFGPGVMEKK LAW D+ AINP+ IMASISA+GRESPLSHKTGYDWVAQAF+GIMHM G RDGPPLPVGLG+AD+ SGVHAFSAIGYALFHRSRTG GQWLD+SMVDAMFH+HDVSLQG+TL+KGKFRPHRQGAHHELIAPFGVFKGP+GYIC+L+LQPQWKNVCAAIGRP
Sbjct:   12 FTQYLAGPTVGRLMAEMGADITKIEIAPGGDPSRGLPFTDDGRSGYFIQQNRGKKSLGLNLKKPESDVILRELIAEVDVVIENFGPGVMEKKHLAWDDIKAINPKAIMASISAYGRESPLSHKTGYDWVAQAFAGIMHMTGERDGPPLPVGLGVADITSGVHAFSAIGYALFHRSRTGVGQWLDISMVDAMFHLHDVSLQGFTLTKGKFRPHRQGAHHELIAPFGVFKGPSGYICILSLQPQWKNVCAAIGRP 264          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A1Z9UDE0_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UDE0_9GAMM)

HSP 1 Score: 438 bits (1126), Expect = 5.300e-152
Identity = 205/251 (81.67%), Postives = 226/251 (90.04%), Query Frame = 1
Query:    4 TQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGR 756
            TQYLAGPT+GRLMAE+GAE+IK+E AP GDPSRGLPIAD GRSGYFIQQNRGKKS ALDLK+ +S  ILRELI  VDVV+E  GPGVMEKK L+WP+V  INP VIMAS+SA+GRES LSHKTG+DW A AFSG+MHMNG RDGPPLPVG+GIAD+GSGVHAFSAIGYALFHR RTG GQWLD+SMVDAMFH HDVSLQGY+L+KG+FRPHRQGAHHELIAPFG FKGP+GYI +LALQPQWKNVC AIGR
Sbjct:   13 TQYLAGPTIGRLMAEMGAEVIKVEFAPNGDPSRGLPIADSGRSGYFIQQNRGKKSXALDLKQDKSIDILRELIEKVDVVVEXXGPGVMEKKNLSWPEVQVINPSVIMASVSAYGRESTLSHKTGFDWAAXAFSGLMHMNGERDGPPLPVGIGIADIGSGVHAFSAIGYALFHRERTGRGQWLDISMVDAMFHNHDVSLQGYSLTKGEFRPHRQGAHHELIAPFGTFKGPSGYIVILALQPQWKNVCKAIGR 263          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A2E6E569_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6E569_9ACTN)

HSP 1 Score: 412 bits (1058), Expect = 1.180e-141
Identity = 196/254 (77.17%), Postives = 221/254 (87.01%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADD-GRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGPTVGRLMAE+GAEIIKIEIAP G  SRG+PI    GRSGYFIQQNRGKKSL LDLKK  ++ I+ +LI  VDV++ENFGPGVMEKKG  W  V  INP V+MASISA+GRES LSHKTGYDW AQA+SG+M MNG RDGPPLPVG+GIAD+GSGVHAFSAIG ALFH+ RTG GQWLD SMVD+MFHMHDVSLQGY+L+ GK+RP RQGAHHELIAPFGVF+GP+GYI +++LQPQW+NVC AIGRP
Sbjct:   12 FTQYLAGPTVGRLMAEMGAEIIKIEIAPNGXASRGIPIVKKPGRSGYFIQQNRGKKSLCLDLKKEGANQIVEDLIKKVDVIVENFGPGVMEKKGWDWKGVQKINPSVVMASISAYGRESTLSHKTGYDWAAQAYSGLMXMNGERDGPPLPVGIGIADIGSGVHAFSAIGXALFHKLRTGRGQWLDXSMVDSMFHMHDVSLQGYSLTDGKWRPFRQGAHHELIAPFGVFRGPSGYIVIMSLQPQWENVCEAIGRP 265          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A1Z8WW87_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WW87_9GAMM)

HSP 1 Score: 359 bits (921), Expect = 6.720e-121
Identity = 167/252 (66.27%), Postives = 203/252 (80.56%), Query Frame = 1
Query:    4 TQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            TQYLAGPTVGRLMAELGAE+IKIEIAP GDPSR LPI+  G SGYF+QQNRGKKS+ LD+KK  S  I+  LI   DV +EN GPGV+EK+   W +V  +N +++MASIS +G+   LSHKTGYDW AQAFSG+MHM G R GPP PVG+GIADVG+GVHAF+ IG ALFHR RTG GQ++D+SMVDA+FHMHD+S+QG +LS   ++P R G HHELIAPFGVF+GPTG++ +L+LQ QW  VC A+G+P
Sbjct:   11 TQYLAGPTVGRLMAELGAEVIKIEIAPDGDPSRSLPISKKGTSGYFVQQNRGKKSVGLDIKKSGSSQIIERLIKQADVFVENLGPGVLEKRKWDWKNVKNLNDRLVMASISMYGKTGHLSHKTGYDWAAQAFSGLMHMTGERKGPPTPVGIGIADVGAGVHAFAGIGMALFHRMRTGRGQFIDISMVDALFHMHDLSIQGSSLSDDNWKPKRCGTHHELIAPFGVFQGPTGFLVILSLQRQWPLVCKAMGKP 262          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A7Y4X569_9DELT (CoA transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X569_9DELT)

HSP 1 Score: 347 bits (891), Expect = 3.180e-116
Identity = 159/253 (62.85%), Postives = 202/253 (79.84%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGPTV RLMAE+GA I+K+E AP GDP+R LP   +GRS YF+QQNRGKKS+ +D  KPE   +L  L+  VDVV+ENFGPGVMEK+GL +  +  INP++IM SISAFGR+SPLSHK GYD +AQAFSGIMHM G  DGPP  VGLGIADV SGVHAF+A+GYAL++R +TG GQ +D+SM+DA++HMH+V++Q +T++ G++ P R G+HH L+ P G FKGP G+I +LAL  QW+ VC A+G+P
Sbjct:   19 FTQYLAGPTVTRLMAEMGARIVKVEQAPMGDPARLLPFVKEGRSAYFVQQNRGKKSVCVDFNKPEGVELLHSLVRTVDVVVENFGPGVMEKRGLDYASLKKINPKIIMVSISAFGRKSPLSHKVGYDLIAQAFSGIMHMTGEADGPPQFVGLGIADVSSGVHAFAALGYALYYREKTGVGQHIDMSMIDALYHMHEVNVQVHTMTDGQYVPKRAGSHHPLVCPVGTFKGPQGWIVILALDRQWEGVCKALGKP 271          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A7Y3M8A8_9DELT (CoA transferase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M8A8_9DELT)

HSP 1 Score: 346 bits (888), Expect = 1.030e-115
Identity = 161/253 (63.64%), Postives = 199/253 (78.66%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGPT  RLMAE+GAE+IK+E AP GDP+R LP+  D RSGYF+QQNRGKKSL LDLK+ E+  IL  L+  +DV+IEN+G GVM+K+GL+W +VH  NP+++MASISAFGR  P  HKTGYD++AQAFSG+MHM G  DG P  VG GIAD  +GVHAF+AIGYALF R +TG GQ++DLSM+DA++HMH+++LQG+ L+ G     R G+HH LI P G FK P GYI +LALQ QWKNVC A+ RP
Sbjct:   23 FTQYLAGPTTTRLMAEMGAEVIKVEHAPDGDPARILPVVKDRRSGYFVQQNRGKKSLCLDLKRAEAVEILHALLPQLDVIIENYGLGVMDKRGLSWEEVHEANPKIVMASISAFGRTGPFKHKTGYDFIAQAFSGMMHMTGDADGLPYQVGYGIADQTAGVHAFAAIGYALFARGQTGRGQYIDLSMIDALYHMHEITLQGHDLTDGALEAKRTGSHHPLICPVGAFKSPGGYIVILALQRQWKNVCEALERP 275          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A534RQ52_9DELT (CoA transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534RQ52_9DELT)

HSP 1 Score: 345 bits (884), Expect = 3.660e-115
Identity = 165/253 (65.22%), Postives = 198/253 (78.26%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGPT  RLMAELGAEIIK+E APGGDPSR LP   DGRS YFIQQNRGKKSL +D  KPE   ++R LI  VDVVIEN+GPGV+EK+GL +  +  +NP++IM SISAFGR+SPLSH TGYD++AQAFSGIMHM G  DGPP  VG+ IAD  +GVHAF+A+GYAL HR RTG GQ++D+SMVDA++HM  V +Q +  SKGK++P R G HH +  P GVFKGP GY+ +LAL  QW NV  A+G+P
Sbjct:   19 FTQYLAGPTATRLMAELGAEIIKVEQAPGGDPSRALPFLQDGRSVYFIQQNRGKKSLCVDFSKPEGVELIRALIPQVDVVIENYGPGVLEKRGLDYAALQQLNPRLIMCSISAFGRQSPLSHLTGYDYIAQAFSGIMHMTGDPDGPPRFVGVAIADGTAGVHAFAALGYALRHRDRTGQGQYIDISMVDALYHMQSVEVQMFAASKGKYKPMRFGVHHYMSCPQGVFKGPQGYLVILALDRQWPNVARALGKP 271          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A3D5DG32_9GAMM (Formyl-CoA transferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DG32_9GAMM)

HSP 1 Score: 327 bits (838), Expect = 2.630e-108
Identity = 152/253 (60.08%), Postives = 194/253 (76.68%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGP V RLMAE+GAEIIK+E  P GDP+R LP+  +GRS YFIQQN GKKSL LDL KPES  I+  L+   DVV+ENF   V +K+ L +  +  INP+VI+AS+SAFGR+SP + KTGYDW+AQAF+G+MHM G +DG P PVG+GIAD  +GVHAFSAIGYAL++R +TG GQ+LD+SM+DA++HM+++++QGY  S G + P R G HH L+ P GV+K   GYI +L LQ QW  +C A+GRP
Sbjct:   11 FTQYLAGPVVTRLMAEMGAEIIKVEQGPNGDPTRILPVIKNGRSAYFIQQNLGKKSLCLDLSKPESQTIIDGLVAECDVVVENFSKRVADKRKLDYRSLIKINPKVIVASVSAFGRDSPYAAKTGYDWIAQAFTGVMHMTGPKDGKPHPVGIGIADSNAGVHAFSAIGYALYYREKTGRGQYLDISMIDALYHMNEITVQGYQASDGAYVPTRVGEHHALVCPCGVYKSAEGYIVLLVLQNQWPGLCKAMGRP 263          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A523P8W4_9PROT (CoA transferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P8W4_9PROT)

HSP 1 Score: 327 bits (838), Expect = 2.630e-108
Identity = 149/253 (58.89%), Postives = 194/253 (76.68%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGP V RLMAE+GAEIIK+E  P GDP+R LP+  +GRS YF+QQ+ GKKS+ LDL KPES +I+ EL+   DVV+ENF   V +K+GL +  +  INPQ+I+AS+SAFGR    + KTGYDW+AQ F+G+MHM G +DGPP PVG+GIAD  +GVHAF+AIGYAL++R +TG GQ+LD+SMVDA+FHM++++LQ Y  + G + P R G HH L+ P GVFK   GY+ +L LQ QW+ +C A+GRP
Sbjct:   11 FTQYLAGPVVTRLMAEMGAEIIKVEQGPDGDPTRTLPVIKNGRSAYFVQQSLGKKSICLDLSKPESQSIIDELVAECDVVVENFSKRVADKRGLDYHSLAKINPQIIVASVSAFGRTGKYATKTGYDWIAQGFAGVMHMTGPKDGPPHPVGIGIADSNAGVHAFAAIGYALYYREKTGKGQYLDISMVDALFHMNELTLQAYAATDGAYEPMRAGEHHALVCPCGVFKSRDGYMVLLVLQGQWQGLCDAMGRP 263          
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Match: A0A7Y4U050_9DELT (CoA transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U050_9DELT)

HSP 1 Score: 327 bits (838), Expect = 3.390e-108
Identity = 153/253 (60.47%), Postives = 195/253 (77.08%), Query Frame = 1
Query:    1 FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQNRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVHAINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPVGLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQGYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAIGRP 759
            FTQYLAGPT  RLMAELGAE+IK+E A GGDPSR LP   +GRS Y+IQQNRGKKS  +D  KPE   ++R LI +VDVVIEN+GPGVME++GL +  +  INP ++M S+SAFGR+SPLSH TGYD++AQAFSG+MHM G  DGPP  VG+ IAD  +GV+AF+A+GYAL H+ RTG GQ++D+SMVDA++HM  V +Q +  + G ++P R G HH + +P GVFK   GYI +LAL+ QW NVC A+G+P
Sbjct:   19 FTQYLAGPTATRLMAELGAEVIKVEQAKGGDPSRSLPFVKEGRSIYYIQQNRGKKSFCVDFSKPEGIELVRALIPHVDVVIENYGPGVMERRGLDYASLQQINPGLVMCSVSAFGRKSPLSHLTGYDYIAQAFSGVMHMTGDADGPPRFVGVAIADGIAGVNAFAALGYALLHKHRTGQGQYIDISMVDALYHMQSVEVQMFAANGGAYKPMRYGIHHHMSSPQGVFKSKQGYIVILALERQWANVCQALGKP 271          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92710.21448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DCB3_9GAMM1.090e-16587.75Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A1Z9UDE0_9GAMM5.300e-15281.67Uncharacterized protein n=3 Tax=Gammaproteobacteri... [more]
A0A2E6E569_9ACTN1.180e-14177.17Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A1Z8WW87_9GAMM6.720e-12166.27Uncharacterized protein n=1 Tax=Methylococcaceae b... [more]
A0A7Y4X569_9DELT3.180e-11662.85CoA transferase n=1 Tax=Deltaproteobacteria bacter... [more]
A0A7Y3M8A8_9DELT1.030e-11563.64CoA transferase n=1 Tax=Myxococcales bacterium Tax... [more]
A0A534RQ52_9DELT3.660e-11565.22CoA transferase n=1 Tax=Deltaproteobacteria bacter... [more]
A0A3D5DG32_9GAMM2.630e-10860.08Formyl-CoA transferase n=1 Tax=Gammaproteobacteria... [more]
A0A523P8W4_9PROT2.630e-10858.89CoA transferase n=1 Tax=Proteobacteria bacterium T... [more]
A0A7Y4U050_9DELT3.390e-10860.47CoA transferase n=1 Tax=Deltaproteobacteria bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92710contigM-pyrifera_M_contig92710:3..761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score243.0
Seed ortholog evalue1.5e-61
Seed eggNOG ortholog2074.JNYD01000010_gene1008
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM CoA-transferase family III
EggNOG OGs2GIU7@201174,4DYSZ@85010,COG1804@1,COG1804@2
COG Functional cat.C
Best tax levelPseudonocardiales
Best eggNOG OGNA|NA|NA
Exons1
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.3412714-CDS-M-pyrifera_M_contig92710:2..7611622816840.3412714-CDS-M-pyrifera_M_contig92710:2..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92710 3..761 -
1692278209.3622108-CDS-M-pyrifera_M_contig92710:2..7611692278209.3622108-CDS-M-pyrifera_M_contig92710:2..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92710 3..761 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92710.21448.1prot_M-pyrifera_M_contig92710.21448.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92710 3..761 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92710.21448.1

>prot_M-pyrifera_M_contig92710.21448.1 ID=prot_M-pyrifera_M_contig92710.21448.1|Name=mRNA_M-pyrifera_M_contig92710.21448.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=253bp
FTQYLAGPTVGRLMAELGAEIIKIEIAPGGDPSRGLPIADDGRSGYFIQQ
NRGKKSLALDLKKPESDAILRELIGNVDVVIENFGPGVMEKKGLAWPDVH
AINPQVIMASISAFGRESPLSHKTGYDWVAQAFSGIMHMNGHRDGPPLPV
GLGIADVGSGVHAFSAIGYALFHRSRTGAGQWLDLSMVDAMFHMHDVSLQ
GYTLSKGKFRPHRQGAHHELIAPFGVFKGPTGYICMLALQPQWKNVCAAI
GRP
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mRNA from alignment at M-pyrifera_M_contig92710:3..761-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92710.21448.1 ID=mRNA_M-pyrifera_M_contig92710.21448.1|Name=mRNA_M-pyrifera_M_contig92710.21448.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=759bp|location=Sequence derived from alignment at M-pyrifera_M_contig92710:3..761- (Macrocystis pyrifera P11B4 male)
TTTACCCAGTACCTCGCGGGACCCACGGTCGGACGGCTCATGGCCGAACT CGGTGCGGAGATCATCAAGATCGAAATTGCGCCGGGCGGCGATCCCTCGC GCGGCCTGCCGATCGCTGACGACGGGCGCAGCGGTTATTTCATCCAGCAG AATCGCGGCAAGAAAAGTCTCGCGCTCGATCTGAAGAAACCGGAAAGCGA CGCAATCCTGCGTGAGTTGATCGGCAACGTCGATGTCGTGATCGAAAACT TCGGTCCCGGTGTGATGGAAAAGAAAGGGCTGGCCTGGCCCGATGTACAC GCGATCAATCCGCAGGTAATCATGGCTTCGATCTCCGCGTTCGGGCGCGA GAGTCCGCTGTCGCATAAAACCGGTTACGACTGGGTTGCGCAGGCGTTCT CGGGGATCATGCACATGAACGGTCATCGCGACGGTCCGCCGTTGCCGGTG GGGCTCGGGATCGCGGACGTCGGCAGCGGCGTGCACGCATTTTCGGCCAT TGGTTATGCCTTGTTTCATCGCTCGCGGACCGGTGCCGGGCAATGGCTGG ATCTGTCGATGGTCGATGCGATGTTTCACATGCACGACGTATCGCTGCAG GGTTACACGCTGTCTAAGGGCAAGTTTCGCCCGCATCGCCAGGGCGCGCA CCACGAACTGATCGCGCCGTTCGGCGTCTTCAAGGGTCCCACCGGATATA TCTGCATGCTAGCGTTGCAACCGCAATGGAAGAACGTATGCGCCGCGATC GGCCGACCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92710:3..761-

>mRNA_M-pyrifera_M_contig92710.21448.1 ID=mRNA_M-pyrifera_M_contig92710.21448.1|Name=mRNA_M-pyrifera_M_contig92710.21448.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1518bp|location=Sequence derived from alignment at M-pyrifera_M_contig92710:3..761- (Macrocystis pyrifera P11B4 male)
TTTACCCAGTACCTCGCGGGACCCACGGTCGGACGGCTCATGGCCGAACT
CGGTGCGGAGATCATCAAGATCGAAATTGCGCCGGGCGGCGATCCCTCGC
GCGGCCTGCCGATCGCTGACGACGGGCGCAGCGGTTATTTCATCCAGCAG
AATCGCGGCAAGAAAAGTCTCGCGCTCGATCTGAAGAAACCGGAAAGCGA
CGCAATCCTGCGTGAGTTGATCGGCAACGTCGATGTCGTGATCGAAAACT
TCGGTCCCGGTGTGATGGAAAAGAAAGGGCTGGCCTGGCCCGATGTACAC
GCGATCAATCCGCAGGTAATCATGGCTTCGATCTCCGCGTTCGGGCGCGA
GAGTCCGCTGTCGCATAAAACCGGTTACGACTGGGTTGCGCAGGCGTTCT
CGGGGATCATGCACATGAACGGTCATCGCGACGGTCCGCCGTTGCCGGTG
GGGCTCGGGATCGCGGACGTCGGCAGCGGCGTGCACGCATTTTCGGCCAT
TGGTTATGCCTTGTTTCATCGCTCGCGGACCGGTGCCGGGCAATGGCTGG
ATCTGTCGATGGTCGATGCGATGTTTCACATGCACGACGTATCGCTGCAG
GGTTACACGCTGTCTAAGGGCAAGTTTCGCCCGCATCGCCAGGGCGCGCA
CCACGAACTGATCGCGCCGTTCGGCGTCTTCAAGGGTCCCACCGGATATA
TCTGCATGCTAGCGTTGCAACCGCAATGGAAGAACGTATGCGCCGCGATC
GGCCGACCGTTTACCCAGTACCTCGCGGGACCCACGGTCGGACGGCTCAT
GGCCGAACTCGGTGCGGAGATCATCAAGATCGAAATTGCGCCGGGCGGCG
ATCCCTCGCGCGGCCTGCCGATCGCTGACGACGGGCGCAGCGGTTATTTC
ATCCAGCAGAATCGCGGCAAGAAAAGTCTCGCGCTCGATCTGAAGAAACC
GGAAAGCGACGCAATCCTGCGTGAGTTGATCGGCAACGTCGATGTCGTGA
TCGAAAACTTCGGTCCCGGTGTGATGGAAAAGAAAGGGCTGGCCTGGCCC
GATGTACACGCGATCAATCCGCAGGTAATCATGGCTTCGATCTCCGCGTT
CGGGCGCGAGAGTCCGCTGTCGCATAAAACCGGTTACGACTGGGTTGCGC
AGGCGTTCTCGGGGATCATGCACATGAACGGTCATCGCGACGGTCCGCCG
TTGCCGGTGGGGCTCGGGATCGCGGACGTCGGCAGCGGCGTGCACGCATT
TTCGGCCATTGGTTATGCCTTGTTTCATCGCTCGCGGACCGGTGCCGGGC
AATGGCTGGATCTGTCGATGGTCGATGCGATGTTTCACATGCACGACGTA
TCGCTGCAGGGTTACACGCTGTCTAAGGGCAAGTTTCGCCCGCATCGCCA
GGGCGCGCACCACGAACTGATCGCGCCGTTCGGCGTCTTCAAGGGTCCCA
CCGGATATATCTGCATGCTAGCGTTGCAACCGCAATGGAAGAACGTATGC
GCCGCGATCGGCCGACCG
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