mRNA_M-pyrifera_M_contig92707.21447.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92707.21447.1
Unique NamemRNA_M-pyrifera_M_contig92707.21447.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A7W0H1T5_9ACTN (DEAD/DEAH box helicase family protein n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0H1T5_9ACTN)

HSP 1 Score: 348 bits (892), Expect = 5.500e-116
Identity = 164/251 (65.34%), Postives = 205/251 (81.67%), Query Frame = 1
Query:    7 PAETPHLWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLDDVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            P +   LW  Q +A+ N + S+++ KPRALIQMATGSGKTY AAN+CYRLI++A   RILFLVDR NLGRQT  EF +FDTP DGRKFT+LYN+QHL SN +D V++V I+T+QR+YSIL GEA  D   +E + F+  P+RPVE+ Y+PA+P+E FD +I+DECHRSI+GVWRQVLEYFDA ++GLTATP KQ FGFF+QNLVMEYS ++AV DGVNVD+ V+RIRTE+TEKGST++AG  A FRDR+TR
Sbjct:   85 PVDRGRLWGVQPEAIQNTEKSMRLGKPRALIQMATGSGKTYVAANLCYRLIREANVGRILFLVDRGNLGRQTKTEFYKFDTPGDGRKFTELYNIQHLTSNHIDGVSRVCISTIQRMYSILGGEAHLDEEADEHSSFEDAPTRPVEISYNPAVPIETFDVVIVDECHRSIFGVWRQVLEYFDASIVGLTATPNKQAFGFFNQNLVMEYSHDNAVVDGVNVDYSVYRIRTEVTEKGSTIDAGLAAGFRDRQTR 335          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A7X3RCH3_9BACT (DEAD/DEAH box helicase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3RCH3_9BACT)

HSP 1 Score: 355 bits (912), Expect = 2.650e-113
Identity = 178/256 (69.53%), Postives = 208/256 (81.25%), Query Frame = 1
Query:    4 LPAETPHLWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLD----DVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            L A+  HLW AQ +AV NL+ S K  +PRALIQMATGSGKT+TAA++CYRL++ AGA+RILFLVDR+NLGRQ L EFQ F TPDDGRK T+LYNV+HL S+ LD       KV I T+QRL+SILRGE E D   +E++GF++ PS PVEV Y+P +P+E +D IIIDECHRSIYGVWRQVLEYFDA+L+GLTATPGKQTFGFFDQNLVMEY    AVAD VNVDFDVFRIRTEITE G TV A +V +FRDR+TR
Sbjct:  160 LDADAGHLWPAQEEAVRNLEQSFKDNRPRALIQMATGSGKTFTAASVCYRLLRHAGAERILFLVDRANLGRQALREFQGFSTPDDGRKLTELYNVRHLTSSRLDMANEAATKVHICTIQRLHSILRGEDELDEALDEKSGFEVAPSEPVEVSYNPLVPIESYDLIIIDECHRSIYGVWRQVLEYFDAFLVGLTATPGKQTFGFFDQNLVMEYGHAQAVADRVNVDFDVFRIRTEITESGGTVPAEFVTKFRDRDTR 415          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: UPI001C3E80D6 (DEAD/DEAH box helicase family protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3E80D6)

HSP 1 Score: 355 bits (910), Expect = 4.270e-113
Identity = 174/245 (71.02%), Postives = 207/245 (84.49%), Query Frame = 1
Query:   25 LWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLDDVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            LW AQ +A+ NL++SL   +PRALIQMATGSGKT+TAANI YRLIK A A+RILFLVDR+NLGRQTL EFQ F TP DGRKFTDLYNVQHL SNT+D VA+VTI+T+QRLYS LRG+ E D   +E +  ++ P+ PV V Y+PALP+E FD II+DECHRSI+GVWRQV++YFDA++IGLTATP KQ FGFF+QNLVMEYS E AVADGVNVDFDV+RIRT+ITE G T++AG V +FRDR+TR
Sbjct:  172 LWPAQARAIRNLEESLVAGRPRALIQMATGSGKTFTAANIAYRLIKHADARRILFLVDRANLGRQTLKEFQGFVTPGDGRKFTDLYNVQHLASNTIDPVARVTISTIQRLYSTLRGDPELDQEVDEHSSMELVPADPVPVAYNPALPIEEFDVIIVDECHRSIFGVWRQVIDYFDAFVIGLTATPNKQAFGFFNQNLVMEYSHEQAVADGVNVDFDVYRIRTQITEHGGTIDAGLVTQFRDRQTR 416          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A522MZN8_9BACT (DEAD/DEAH box helicase n=1 Tax=bacterium TaxID=1869227 RepID=A0A522MZN8_9BACT)

HSP 1 Score: 350 bits (899), Expect = 1.240e-111
Identity = 170/245 (69.39%), Postives = 206/245 (84.08%), Query Frame = 1
Query:   25 LWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLDDVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            LW AQ +A+ NL++SLK  +PRALIQMATGSGKT+TAANI YRLIK AGA+RILFLVDR+NLGRQTL EFQ F TPDDGRKFT+LYNVQ L SN +D V++V I+T+QRLYSIL+GE +     +EE+ ++++P RP EV Y+PA+P+E FD II+DECHRSIYG+WRQVLEYFDA++IGLTATPGKQ  GFF+QNLVMEY+ E AVAD VNVDFDV+RI TEI+  GS ++AG V  FRDR+TR
Sbjct:  150 LWVAQAEAIRNLEESLKHSRPRALIQMATGSGKTFTAANIAYRLIKYAGARRILFLVDRANLGRQTLKEFQAFSTPDDGRKFTELYNVQRLGSNRIDGVSRVVISTIQRLYSILKGEPDLAEELDEESAYELQPPRPAEVAYNPAVPIETFDVIIVDECHRSIYGLWRQVLEYFDAFIIGLTATPGKQALGFFNQNLVMEYNHERAVADNVNVDFDVYRISTEISAMGSKIDAGLVTTFRDRQTR 394          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A7K2AC78_9ACTN (Type I site-specific deoxyribonuclease (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2AC78_9ACTN)

HSP 1 Score: 337 bits (865), Expect = 4.640e-111
Identity = 170/249 (68.27%), Postives = 204/249 (81.93%), Query Frame = 1
Query:   25 LWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLD----DVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            LW+AQ +A+ NL+ S +  +PRAL+QMATGSGKT+TAAN  YRL++ AGA+R+LFLVDR+NLGRQ + EFQ F+TPDD RKFT+LYNV+ L S+ LD       KV ++T+QR+YSIL+GE E D   +E +GFD+ P  PVEV Y+PA+P+E +D IIIDECHRSIYGVWRQVLEYFDA+L+GLTATPGKQT GFFDQNLVMEY  E AVAD VNVDFDVFRIRTEI+E G TV+AG V EFRDRETR
Sbjct:  178 LWSAQAEAIRNLEASFQANRPRALVQMATGSGKTFTAANAVYRLLRHAGAQRVLFLVDRANLGRQAVREFQGFETPDDRRKFTELYNVRFLESSRLDMSDESATKVYVSTIQRIYSILQGE-ELDEGLDERSGFDMAPRDPVEVVYNPAVPIESYDVIIIDECHRSIYGVWRQVLEYFDAFLVGLTATPGKQTLGFFDQNLVMEYGHERAVADRVNVDFDVFRIRTEISETGGTVDAGMVTEFRDRETR 425          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A6B1EDK7_9ACTN (DEAD/DEAH box helicase n=3 Tax=Bacteria TaxID=2 RepID=A0A6B1EDK7_9ACTN)

HSP 1 Score: 348 bits (894), Expect = 1.040e-110
Identity = 169/256 (66.02%), Postives = 209/256 (81.64%), Query Frame = 1
Query:    4 LPAETPHLWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLD----DVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            L  E P LW AQ +A+ NL++SL+  +PRALIQMATG+GKT+TAAN+CYRL++ AGA+RILFLVDR+NLGRQ + EF+ F  PDD RKFT+LYNV+ L ++ LD       KV ++T+QRLYSILRG+ ++D + +E+TGF+  P +PVEV Y+P +P+E++D IIIDECHRSIYGVWRQVLEYFDA+L+GLTATPG QTF FFDQN+VMEY  E AVAD VNVDFDVFRIRTE+TE G TV A +V EFRDRETR
Sbjct:  151 LEPEAPGLWPAQAEAIRNLEESLRENRPRALIQMATGAGKTFTAANVCYRLVRHAGARRILFLVDRANLGRQAVREFEDFTVPDDRRKFTELYNVRRLATSRLDIADETATKVHVSTIQRLYSILRGDDDYDESLDEQTGFETAPDQPVEVSYNPKVPIEFYDLIIIDECHRSIYGVWRQVLEYFDAFLVGLTATPGIQTFAFFDQNMVMEYGHEQAVADRVNVDFDVFRIRTELTESGGTVPADFVTEFRDRETR 406          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A7K1ZGP5_9ACTN (DEAD/DEAH box helicase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZGP5_9ACTN)

HSP 1 Score: 348 bits (893), Expect = 2.490e-110
Identity = 176/256 (68.75%), Postives = 208/256 (81.25%), Query Frame = 1
Query:    4 LPAETPHLWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLDDVA----KVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            L ++   LW AQ +A+ NL+ SLK  +PRALIQMATGSGKT+TAAN+CYRL++ +GA R+LFLVDR+NLGRQ L EFQ F TPDDGRKFT+LYNV+HL S+ LD  +    KV + T+QRLYSILRGE E+D   +E++GF+  P+ PVEV Y+PA+P+E +D IIIDECHRSIYGVWRQVLEYFDA+L+GLTATPG QTFGFFDQNLVMEY    AVAD VNVDFDVF IRTEITE G TV A +V EFRDRETR
Sbjct:  180 LASKAHRLWPAQVEAIHNLEQSLKESRPRALIQMATGSGKTFTAANVCYRLLRHSGASRVLFLVDRANLGRQALREFQGFITPDDGRKFTELYNVRHLASSRLDMASEMATKVHVCTIQRLYSILRGEDEYDEALDEKSGFETVPTVPVEVAYNPAVPIESYDLIIIDECHRSIYGVWRQVLEYFDAFLVGLTATPGIQTFGFFDQNLVMEYGHAQAVADRVNVDFDVFWIRTEITESGGTVPAEFVTEFRDRETR 435          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A7W1YQR9_9CHLR (DEAD/DEAH box helicase family protein n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1YQR9_9CHLR)

HSP 1 Score: 344 bits (883), Expect = 3.550e-109
Identity = 172/248 (69.35%), Postives = 205/248 (82.66%), Query Frame = 1
Query:   25 LWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLDDVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIE---PSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            LW AQ +A+ NL+ SL   + RALIQMATGSGKT+TA N  YRL+K   A+R+LFLVDR NLGRQTL EFQQF TPDDGRKFT+LYNVQHL SNTLDDV++V ITT+QRLYS+L GEAEFDP  EE + F++E   P+ P  VDY+P +P+E FD I+ DECHRSIY +WR VLEYFDA+LIGLTATP KQTFGFF+QNLVMEYSR+ AVADGVNVD +V+RIRT+ITE GST++AGY  + R+R+TR
Sbjct:  157 LWGAQIEAITNLEQSLAADRLRALIQMATGSGKTFTAVNAIYRLLKFGDARRVLFLVDRGNLGRQTLKEFQQFVTPDDGRKFTELYNVQHLQSNTLDDVSRVCITTIQRLYSMLSGEAEFDPAQEERSLFEVEETLPAEPKSVDYNPKIPIEQFDIIVTDECHRSIYNLWRYVLEYFDAHLIGLTATPSKQTFGFFNQNLVMEYSRQRAVADGVNVDGEVYRIRTKITEGGSTIDAGYWVDKRERQTR 404          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: A0A7K2E6M6_9ACTN (DEAD/DEAH box helicase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E6M6_9ACTN)

HSP 1 Score: 339 bits (869), Expect = 7.450e-109
Identity = 168/256 (65.62%), Postives = 205/256 (80.08%), Query Frame = 1
Query:    4 LPAETPHLWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLD----DVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            L  + P LW AQ +A+  L+ SL+  +PRALIQMATG+GKT+TAAN+CYRL++ AGA+RILFLVDR+NLGRQ + EF+ F  PDD RKFT+LYNV+ L S+ LD       KV ++T+QRLYSILRG+ +++ + +E+TGFD  P++PVEV Y+P +P+E +D IIIDECHRSIYGVWRQVLEYFDA L+GLTATPG QTF FF QN+VMEY  E AVAD VNVDFDVFRIRTEITE G TV A +V EFRDRETR
Sbjct:  172 LETDAPGLWPAQAEAIRKLEQSLRENRPRALIQMATGAGKTFTAANVCYRLLRHAGARRILFLVDRANLGRQAVREFEGFTVPDDPRKFTELYNVRRLASSRLDMAGEAATKVHVSTIQRLYSILRGDDDYNESLDEQTGFDTAPTQPVEVSYNPRVPIESYDLIIIDECHRSIYGVWRQVLEYFDACLVGLTATPGTQTFAFFAQNMVMEYGHEQAVADRVNVDFDVFRIRTEITESGGTVPADFVTEFRDRETR 427          
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Match: L7VUZ8_9BACT (Type I restriction-modification system, restriction subunit R n=3 Tax=root TaxID=1 RepID=L7VUZ8_9BACT)

HSP 1 Score: 343 bits (881), Expect = 1.340e-108
Identity = 172/253 (67.98%), Postives = 209/253 (82.61%), Query Frame = 1
Query:    1 PLPAETPHLWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICYRLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLNSNTLDDVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDYSPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGFFDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDRETR 759
            P+PA+   L   Q +A+G ++ S+    PRAL QMATGSGKT+ AAN+ YRL++ AGA+R+LFLVDR+NLGRQTL EFQQF TP DGRKFTDLYNVQ L SN +D  A+V ITTVQRLYS+LRGE E     +E++G +IEP RPVEV Y+PA+P+E FD +I+DECHRSIYGVWRQV+EYFDA+L+GLTATP KQTFGFF+QNLV+EY    AVADGVNVDFDV+RIRT+I+E+GSTVEAG V +FR+RETR
Sbjct:  183 PVPADG--LRRIQVEAIGRIEASMCRNHPRALAQMATGSGKTFMAANLAYRLVQTAGAERVLFLVDRANLGRQTLREFQQFATPGDGRKFTDLYNVQLLTSNRIDPAARVVITTVQRLYSMLRGEEELPEDVDEKSGAEIEPERPVEVVYNPAIPIEAFDVVIVDECHRSIYGVWRQVIEYFDAFLVGLTATPAKQTFGFFNQNLVVEYGHAEAVADGVNVDFDVYRIRTKISEQGSTVEAGLVTKFRERETR 433          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92707.21447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W0H1T5_9ACTN5.500e-11665.34DEAD/DEAH box helicase family protein n=1 Tax=Ther... [more]
A0A7X3RCH3_9BACT2.650e-11369.53DEAD/DEAH box helicase n=1 Tax=Candidatus Poribact... [more]
UPI001C3E80D64.270e-11371.02DEAD/DEAH box helicase family protein n=1 Tax=Milt... [more]
A0A522MZN8_9BACT1.240e-11169.39DEAD/DEAH box helicase n=1 Tax=bacterium TaxID=186... [more]
A0A7K2AC78_9ACTN4.640e-11168.27Type I site-specific deoxyribonuclease (Fragment) ... [more]
A0A6B1EDK7_9ACTN1.040e-11066.02DEAD/DEAH box helicase n=3 Tax=Bacteria TaxID=2 Re... [more]
A0A7K1ZGP5_9ACTN2.490e-11068.75DEAD/DEAH box helicase n=2 Tax=Acidimicrobiaceae b... [more]
A0A7W1YQR9_9CHLR3.550e-10969.35DEAD/DEAH box helicase family protein n=1 Tax=Herp... [more]
A0A7K2E6M6_9ACTN7.450e-10965.63DEAD/DEAH box helicase n=2 Tax=Acidimicrobiaceae b... [more]
L7VUZ8_9BACT1.340e-10867.98Type I restriction-modification system, restrictio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92707contigM-pyrifera_M_contig92707:3..761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score337.4
Seed ortholog evalue5.7e-90
Seed eggNOG ortholog289376.THEYE_A1697
Preferred namehsdR
KEGG koko:K01153
Hectar predicted targeting categoryother localisation
EggNOG free text desc.type I site-specific deoxyribonuclease activity
EggNOG OGsCOG4096@1,COG4096@2
EC3.1.21.3
COG Functional cat.L
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02048
Exons1
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.299218-CDS-M-pyrifera_M_contig92707:2..7611622816840.299218-CDS-M-pyrifera_M_contig92707:2..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92707 3..761 +
1692278209.347156-CDS-M-pyrifera_M_contig92707:2..7611692278209.347156-CDS-M-pyrifera_M_contig92707:2..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92707 3..761 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92707.21447.1prot_M-pyrifera_M_contig92707.21447.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92707 3..761 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92707.21447.1

>prot_M-pyrifera_M_contig92707.21447.1 ID=prot_M-pyrifera_M_contig92707.21447.1|Name=mRNA_M-pyrifera_M_contig92707.21447.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=253bp
PLPAETPHLWAAQRKAVGNLDDSLKMFKPRALIQMATGSGKTYTAANICY
RLIKQAGAKRILFLVDRSNLGRQTLNEFQQFDTPDDGRKFTDLYNVQHLN
SNTLDDVAKVTITTVQRLYSILRGEAEFDPTTEEETGFDIEPSRPVEVDY
SPALPVEYFDCIIIDECHRSIYGVWRQVLEYFDAYLIGLTATPGKQTFGF
FDQNLVMEYSREHAVADGVNVDFDVFRIRTEITEKGSTVEAGYVAEFRDR
ETR
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mRNA from alignment at M-pyrifera_M_contig92707:3..761+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92707.21447.1 ID=mRNA_M-pyrifera_M_contig92707.21447.1|Name=mRNA_M-pyrifera_M_contig92707.21447.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=759bp|location=Sequence derived from alignment at M-pyrifera_M_contig92707:3..761+ (Macrocystis pyrifera P11B4 male)
CCGCTGCCGGCGGAGACGCCTCATCTGTGGGCGGCGCAGCGAAAGGCGGT CGGCAACCTCGACGACTCGCTGAAGATGTTCAAGCCTCGGGCGTTGATCC AGATGGCGACCGGGTCGGGCAAGACCTACACGGCAGCGAACATCTGTTAC CGGCTCATCAAGCAGGCCGGAGCCAAACGAATCCTGTTCCTCGTCGACCG GTCGAACCTCGGCCGTCAGACCCTCAACGAGTTCCAGCAGTTCGACACGC CCGACGACGGACGCAAGTTCACCGACCTCTACAACGTCCAACACCTCAAC TCGAACACGCTCGACGACGTCGCCAAGGTCACGATCACCACCGTGCAACG GCTCTATTCGATCCTTAGAGGCGAGGCCGAGTTCGACCCGACCACCGAAG AAGAGACCGGGTTCGATATCGAACCGTCCCGCCCGGTCGAGGTCGACTAC AGCCCGGCGCTCCCAGTCGAGTACTTCGATTGCATTATCATCGACGAATG CCACCGCTCGATCTACGGAGTGTGGCGACAGGTTCTCGAGTACTTCGACG CCTACCTGATCGGTCTCACGGCAACGCCGGGTAAGCAGACGTTCGGGTTC TTCGACCAGAACCTGGTGATGGAGTACTCGAGAGAGCACGCAGTGGCCGA TGGCGTCAACGTCGACTTCGACGTGTTCCGTATCCGCACCGAGATCACCG AGAAGGGCTCGACAGTCGAAGCCGGCTATGTGGCGGAGTTCCGGGACCGC GAGACCCGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92707:3..761+

>mRNA_M-pyrifera_M_contig92707.21447.1 ID=mRNA_M-pyrifera_M_contig92707.21447.1|Name=mRNA_M-pyrifera_M_contig92707.21447.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1518bp|location=Sequence derived from alignment at M-pyrifera_M_contig92707:3..761+ (Macrocystis pyrifera P11B4 male)
CCGCTGCCGGCGGAGACGCCTCATCTGTGGGCGGCGCAGCGAAAGGCGGT
CGGCAACCTCGACGACTCGCTGAAGATGTTCAAGCCTCGGGCGTTGATCC
AGATGGCGACCGGGTCGGGCAAGACCTACACGGCAGCGAACATCTGTTAC
CGGCTCATCAAGCAGGCCGGAGCCAAACGAATCCTGTTCCTCGTCGACCG
GTCGAACCTCGGCCGTCAGACCCTCAACGAGTTCCAGCAGTTCGACACGC
CCGACGACGGACGCAAGTTCACCGACCTCTACAACGTCCAACACCTCAAC
TCGAACACGCTCGACGACGTCGCCAAGGTCACGATCACCACCGTGCAACG
GCTCTATTCGATCCTTAGAGGCGAGGCCGAGTTCGACCCGACCACCGAAG
AAGAGACCGGGTTCGATATCGAACCGTCCCGCCCGGTCGAGGTCGACTAC
AGCCCGGCGCTCCCAGTCGAGTACTTCGATTGCATTATCATCGACGAATG
CCACCGCTCGATCTACGGAGTGTGGCGACAGGTTCTCGAGTACTTCGACG
CCTACCTGATCGGTCTCACGGCAACGCCGGGTAAGCAGACGTTCGGGTTC
TTCGACCAGAACCTGGTGATGGAGTACTCGAGAGAGCACGCAGTGGCCGA
TGGCGTCAACGTCGACTTCGACGTGTTCCGTATCCGCACCGAGATCACCG
AGAAGGGCTCGACAGTCGAAGCCGGCTATGTGGCGGAGTTCCGGGACCGC
GAGACCCGACCGCTGCCGGCGGAGACGCCTCATCTGTGGGCGGCGCAGCG
AAAGGCGGTCGGCAACCTCGACGACTCGCTGAAGATGTTCAAGCCTCGGG
CGTTGATCCAGATGGCGACCGGGTCGGGCAAGACCTACACGGCAGCGAAC
ATCTGTTACCGGCTCATCAAGCAGGCCGGAGCCAAACGAATCCTGTTCCT
CGTCGACCGGTCGAACCTCGGCCGTCAGACCCTCAACGAGTTCCAGCAGT
TCGACACGCCCGACGACGGACGCAAGTTCACCGACCTCTACAACGTCCAA
CACCTCAACTCGAACACGCTCGACGACGTCGCCAAGGTCACGATCACCAC
CGTGCAACGGCTCTATTCGATCCTTAGAGGCGAGGCCGAGTTCGACCCGA
CCACCGAAGAAGAGACCGGGTTCGATATCGAACCGTCCCGCCCGGTCGAG
GTCGACTACAGCCCGGCGCTCCCAGTCGAGTACTTCGATTGCATTATCAT
CGACGAATGCCACCGCTCGATCTACGGAGTGTGGCGACAGGTTCTCGAGT
ACTTCGACGCCTACCTGATCGGTCTCACGGCAACGCCGGGTAAGCAGACG
TTCGGGTTCTTCGACCAGAACCTGGTGATGGAGTACTCGAGAGAGCACGC
AGTGGCCGATGGCGTCAACGTCGACTTCGACGTGTTCCGTATCCGCACCG
AGATCACCGAGAAGGGCTCGACAGTCGAAGCCGGCTATGTGGCGGAGTTC
CGGGACCGCGAGACCCGA
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