mRNA_M-pyrifera_M_contig92706.21446.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92706.21446.1
Unique NamemRNA_M-pyrifera_M_contig92706.21446.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A5A8CUM7_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUM7_CAFRO)

HSP 1 Score: 171 bits (433), Expect = 4.750e-45
Identity = 99/263 (37.64%), Postives = 141/263 (53.61%), Query Frame = 1
Query:    1 IRVLLHRAEQRGEVPAPWGGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQ-------PDCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIG---NWRQSCCGCXXXXXXXXERLASTPASKISNAERERKMGVFDVEDEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            +RV L R E  GE+ A W G LA I  A+ I +M  +Y A A F+TD E   TD  Y  S   K   F FIN YY+L WI   K A V I+GE+Q C+        DC+ ELQ  L +I + R+++ N  E+ LP+++  +     +R +  G         ER A  P       E E ++  +D  D+YLE   LFGYA +F+ A+P+A  + L +  VE+ +D  K+L+Q+ RP    A  IGVW   FE ++ I++VTN
Sbjct:  430 VRVFLARLEDEGEIAAGWSGNLAGIFTAIQIQLMGFVYKAMAKFMTDVEGHRTDREYKNSLVAKITAFTFINDYYSLIWIAFVKPAGVYIYGELQTCKVNPETGLADCMLELQGQLATILIVRLIIGNVQELFLPVIIPRVMAFFTYRCASEGRRSTLTELNERRAFKPI-----VETEAELPEYDPADDYLELFELFGYAYLFLPAWPLASLVALFSGIVEMYVDSTKLLRQTRRPRTQAAQSIGVWVYAFECLAIIAIVTN 687          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A812W9E1_SYMMI (Ano6 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W9E1_SYMMI)

HSP 1 Score: 146 bits (369), Expect = 2.120e-38
Identity = 85/257 (33.07%), Postives = 136/257 (52.92%), Query Frame = 1
Query:    1 IRVLLHRAEQRGEVPAPWGGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQPDCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKISNAERERKMGVFDVE----DEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            ++++L R +         GG +A++  A+ I VM+ +YG  A  LTDFEN  TD AY  S   K + F F+NS+ ALF+I   K      F  V  C   C+SELQ +LG+IFL+R+ + + ++V +P +M ++    Q               +       ++ AE++  +  + V      +Y E  I +GYA+MFV A+P+A  +  +NNY+E+R+D  K+LQQ  RP P  A  IG W     ++S  +++ N
Sbjct:   95 LKLVLSRIKSLAYAGTHLGGIIAALANAIQIQVMNLIYGGVAIRLTDFENHRTDTAYEDSLIGKTFVFMFVNSFAALFYIAFVKP-----FITVDPCLGPCMSELQTNLGTIFLSRLALGSTLKVVIPSLMNYLNEQAQ---------------MKGDTIHPLTEAEKDYNLMEYHVMLGPFADYTEASIQYGYATMFVAAYPLAAIMSFVNNYIELRVDAWKLLQQCRRPEPRSAEDIGTWQTILHTVSIFALLIN 331          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A5D6Y6A3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6A3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.660e-38
Identity = 95/241 (39.42%), Postives = 128/241 (53.11%), Query Frame = 1
Query:   55 GGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQPD---CLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKISNAERERKMGVFDVE---DEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            GG +AS I AV IM++++MY   A  L ++EN  TD  Y      K + FQF+NSY +LF++   K A      E   C+     C+ EL  +LG IF+ R+   NF EVGLP    WI        G         E + +    + S  ER+ K+ V+D     D+Y E +I FGY ++FV  FP+AP + LLNNY EIRID  K++  + RP P  A  IG W    E +S ISVVTN
Sbjct:  414 GGAVASTINAVQIMILNQMYSGMAAKLNEYENHRTDTEYEDHLIAKTFLFQFVNSYSSLFYVAFIKNA-----AEGNTCKGHHHGCMDELMLALGIIFVLRLTSGNFFEVGLP----WIKRKLAHPGGSK-------ELMKNAVRREQSEVERQMKLDVYDQRGTFDDYNEMIIQFGYVTLFVVGFPLAPALALLNNYFEIRIDAHKLVNATRRPDPRGAQDIGTWGTIIEIMSAISVVTN 638          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: K3W8D0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8D0_GLOUD)

HSP 1 Score: 150 bits (378), Expect = 9.430e-38
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 1
Query:   55 GGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQPDCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKISNAERERKMGVFDVE---DEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            GG +AS I AV IM+++ +Y   A+ L +FEN  TD  +      K + FQF+NSY +LF++   K A     G+ +  +  C+ EL   LG IF+ R+   NF EVGLP +   + N  Q             E   +    + S  ER+ ++ V+D     D+Y E +I FGY ++FV  FP+AP + LLNN+ EIRID  K++  + RP P  A  IG W    E +S ISVVTN
Sbjct:  415 GGPVASTINAVQIMILNNLYSGMASKLNNFENHRTDTEFEDHLIGKTFLFQFVNSYASLFYVAFIKSAAE---GKCKGYEDGCMDELMMGLGIIFVLRLTSGNFFEVGLPWIKQQLANVNQ-----------LSELAKNAVRREPSEIERQMRLDVYDQRGTFDDYNEMIIQFGYVTLFVVGFPLAPALALLNNFFEIRIDAHKLVHATRRPDPRGAQDIGTWGTIIEVMSSISVVTN 638          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A7S2RXH3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXH3_9STRA)

HSP 1 Score: 145 bits (365), Expect = 7.430e-37
Identity = 89/238 (37.39%), Postives = 129/238 (54.20%), Query Frame = 1
Query:   55 GGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVT--IFGEVQQCQPDCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKISNAER-ERKMGVFDVEDEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            G  + S + AV I VM+ +Y   A  LTD EN  T+  Y  +   K + FQF+NS+ +L +I   K+A     I GE++ C P+C SEL   LG IF+  ++  N  EV +PIV   I   ++S              +  T   K   AE  ++ +G F    +Y E +I FGY ++F+ AFP+A  + L+NNY+EIR+DG K+ Q   RP P  A  IG WY F E +S ++VV+N
Sbjct:  158 GSIIGSGLNAVQIQVMNVVYEVIAQKLTDAENHRTETQYEDALIAKTFSFQFVNSFMSLIYIAFIKEALAVNNIAGEIR-CYPNCFSELNTCLGIIFIANIIAGNLAEVVVPIVKARIKEKKES--------KGMVLDIKMTDVEKQFIAEPYDQLLGTFK---DYAEMIIQFGYCTLFIAAFPLATVLALVNNYIEIRVDGWKLCQVHRRPHPTGAEDIGTWYTFLEVMSTLAVVSN 383          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A7R9Y9L2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9L2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.890e-36
Identity = 83/242 (34.30%), Postives = 134/242 (55.37%), Query Frame = 1
Query:   55 GGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFG-EVQQC-QPDCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTP----ASKISNAERERKMGVFDVE-DEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            G ++ ++  A+ I +MD +YGA A  LTD EN  T   Y  +   K++ FQ +NSY AL +I   K      FG +  +C   DCL+EL  +LG+I + R+LV N  E+G+P+++ W   WR              ++  +T     +  +++    +   VF+ + D+YLE +I +GYA++FV AFP+AP +  +NN++EIR+DG K+   S RP P  A  IG W    + +  ++V+ N
Sbjct:  445 GPFIPTVANAIQIQIMDMIYGAIAVKLTDGENHRTQTQYEDNLICKSFLFQCVNSYAALVYIAFVKDH----FGPDSARCLNRDCLAELSTALGTILIVRLLVGNIQEIGVPMLLNW---WRARAARKEAAKHGNEQKKKTTADGDASGTVASQFNLQPYDVFEDQFDDYLELIIQYGYATLFVAAFPLAPVMSFVNNWIEIRVDGFKLCYLSRRPEPRAAQDIGTWQMILDVLGTVAVIVN 679          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A835ZD27_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD27_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.620e-35
Identity = 85/236 (36.02%), Postives = 126/236 (53.39%), Query Frame = 1
Query:   64 LASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQPDCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKISNAERERKMGVFDVE----DEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            + S+  AV I +M+ +YG+ A +L D EN  TD AY  +   K + FQF+NSY +L WI   K  +        +C   C++EL  +LG+IFLTR+ V N  +V LP++       R +               A  P    S AE+E  + ++DV     ++Y E  I FGYA++FV A+P++  +  +NNY+ IR+D  K+LQ   RP P  A  IG W+   E +  ISVV+N
Sbjct:  375 IPSLCNAVQIQIMNAIYGSVAIWLNDLENHRTDTAYEDNLIAKTFMFQFVNSYASLVWIAFIKPRD--------KCVDTCMNELATNLGAIFLTRLAVGNLTQVLLPLLKARALQRRSAA--------------ALDPERMPSIAEKEYVLEIYDVMLGPFNDYAEMAIQFGYATLFVAAYPLSCLMAFINNYIAIRVDAWKLLQVCRRPEPRGAEDIGTWHTILEIMGVISVVSN 588          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A3R7G6E7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6E7_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.670e-35
Identity = 93/245 (37.96%), Postives = 130/245 (53.06%), Query Frame = 1
Query:   55 GGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQP---DCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKI----SNAERERKMGVFDVE---DEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            GG  AS + A+ IMVM+ +Y   A  L  +EN  TD  Y      K + FQF+NSY +LF++   K    ++ GE   C+P    C+ EL   LG IF  RV   NF EVGLP +M  +  WRQ                AS  +S+I    S  E++  + V+D +   D+Y E +I FGY ++FV AFP+AP + L NN+ EIRID  K++  + RP P  A  IG W    + +  I++VTN
Sbjct:  241 GGPAASTVNAIQIMVMNNVYSTVAERLNRYENHRTDTEYEDHLIGKTFLFQFVNSYASLFYVAFIK---TSVEGE-DSCKPVEHGCMDELMMGLGIIFALRVTSGNFFEVGLPWIMKKL-RWRQ----------------ASNASSQIRREPSGIEQQLGLDVYDQKGTFDDYNEMIIQFGYVTLFVVAFPLAPAMALFNNFFEIRIDAHKLVNATRRPDPRGAQDIGTWGTIIDLMGSIAMVTN 464          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A7S2Y160_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y160_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.890e-35
Identity = 82/215 (38.14%), Postives = 116/215 (53.95%), Query Frame = 1
Query:  115 GAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQPDCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKISNAERERKMGVFDVEDEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            G  A +LT+ EN  TD  Y  S   K + FQFINSY +LF+I    Q N+       +C   C+S+L  +LG+IFLTR LV N  EVG+P +        +S            +R  S    +   +E    +G FD   +YLE +I +GYA++FV A+P+A  +  +NN++EIR+DG K+ Q S RP P  A  IG W    E +S  +V+TN
Sbjct:    1 GNIALWLTENENHRTDTGYEDSLIGKTFLFQFINSYASLFFI-AYMQGNIPEEIPTGECVGSCMSQLSTNLGTIFLTRCLVGNITEVGVPYLAARAKESSES-------EDAEPDRTPSMAEKEFFASEYHVMLGTFD---DYLEMVIQYGYATLFVAAYPLALLMCFVNNFIEIRVDGWKLCQHSRRPEPRGAEDIGTWMSILEVMSVTAVLTN 204          
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Match: A0A3F2RRK4_9STRA (Anoct_dimer domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRK4_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.020e-35
Identity = 93/245 (37.96%), Postives = 130/245 (53.06%), Query Frame = 1
Query:   55 GGYLASIIQAVIIMVMDKMYGAFATFLTDFENQPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQP---DCLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCXXXXXXXXERLASTPASKI----SNAERERKMGVFDVE---DEYLEQLILFGYASMFVTAFPIAPFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISVVTN 759
            GG  AS + A+ IMVM+ +Y   A  L  +EN  TD  Y      K + FQF+NSY +LF++   K    ++ GE   C+P    C+ EL   LG IF  RV   NF EVGLP +M  +  WRQ                AS  +S+I    S  E++  + V+D +   D+Y E +I FGY ++FV AFP+AP + L NN+ EIRID  K++  + RP P  A  IG W    + +  I++VTN
Sbjct:  413 GGPAASTVNAIQIMVMNNVYSTVAERLNRYENHRTDTEYEDHLIGKTFLFQFVNSYASLFYVAFIK---TSVEGE-DSCKPVEHGCMDELMMGLGIIFALRVTSGNFFEVGLPWIMKKL-RWRQ----------------ASNASSQIRREPSGIEQQLGLDVYDQKGTFDDYNEMIIQFGYVTLFVVAFPLAPAMALFNNFFEIRIDAHKLVNATRRPDPRGAQDIGTWGTIIDLMGSIAMVTN 636          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92706.21446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CUM7_CAFRO4.750e-4537.64Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A812W9E1_SYMMI2.120e-3833.07Ano6 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A5D6Y6A3_9STRA3.660e-3839.42Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W8D0_GLOUD9.430e-3837.82Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2RXH3_9STRA7.430e-3737.39Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7R9Y9L2_9STRA1.890e-3634.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZD27_9STRA1.620e-3536.02Calcium-activated chloride channel-domain-containi... [more]
A0A3R7G6E7_9STRA1.670e-3537.96Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A7S2Y160_9STRA1.890e-3538.14Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A3F2RRK4_9STRA5.020e-3537.96Anoct_dimer domain-containing protein n=1 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92706contigM-pyrifera_M_contig92706:3..761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.8
Seed ortholog evalue4.4e-34
Seed eggNOG ortholog65071.PYU1_T001221
KEGG koko:K19327,ko:K19480,ko:K19497,ko:K19501
KEGG TC1.A.17.1,1.A.17.1.2,1.A.17.1.21,1.A.17.1.3
KEGG Pathwayko04740,map04740
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Anoctamin. Source PGD
EggNOG OGs1MCK4@121069,KOG2514@1,KOG2514@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Exons1
Model size759
Cds size759
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.2707732-CDS-M-pyrifera_M_contig92706:2..7611622816840.2707732-CDS-M-pyrifera_M_contig92706:2..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92706 3..761 -
1692278209.3308768-CDS-M-pyrifera_M_contig92706:2..7611692278209.3308768-CDS-M-pyrifera_M_contig92706:2..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92706 3..761 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92706.21446.1prot_M-pyrifera_M_contig92706.21446.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92706 3..761 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92706.21446.1

>prot_M-pyrifera_M_contig92706.21446.1 ID=prot_M-pyrifera_M_contig92706.21446.1|Name=mRNA_M-pyrifera_M_contig92706.21446.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=253bp
IRVLLHRAEQRGEVPAPWGGYLASIIQAVIIMVMDKMYGAFATFLTDFEN
QPTDVAYNASRNIKAWCFQFINSYYALFWIITAKQANVTIFGEVQQCQPD
CLSELQNSLGSIFLTRVLVNNFMEVGLPIVMGWIGNWRQSCCGCCCKRTE
EEERLASTPASKISNAERERKMGVFDVEDEYLEQLILFGYASMFVTAFPI
APFIMLLNNYVEIRIDGVKILQQSVRPMPNPAAGIGVWYGFFESISYISV
VTN
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mRNA from alignment at M-pyrifera_M_contig92706:3..761-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92706.21446.1 ID=mRNA_M-pyrifera_M_contig92706.21446.1|Name=mRNA_M-pyrifera_M_contig92706.21446.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=759bp|location=Sequence derived from alignment at M-pyrifera_M_contig92706:3..761- (Macrocystis pyrifera P11B4 male)
ATCCGTGTGCTGTTGCATCGTGCAGAACAACGTGGTGAAGTCCCTGCACC ATGGGGTGGATACTTGGCCTCCATCATCCAAGCCGTGATCATCATGGTGA TGGACAAAATGTATGGTGCGTTTGCCACTTTCCTCACCGACTTTGAGAAC CAACCAACGGATGTTGCTTACAACGCCTCACGTAACATCAAGGCATGGTG TTTTCAATTCATCAACTCCTACTACGCCTTGTTTTGGATCATCACTGCAA AGCAAGCCAATGTTACTATTTTTGGCGAAGTCCAGCAATGCCAACCAGAC TGCCTTTCTGAACTCCAAAACTCGCTTGGATCGATCTTCCTCACCCGTGT CCTCGTCAACAACTTCATGGAAGTTGGTCTTCCCATTGTAATGGGATGGA TTGGAAATTGGCGTCAATCGTGTTGTGGATGTTGCTGCAAGCGAACAGAA GAAGAAGAAAGACTTGCCTCCACGCCCGCTTCAAAAATCAGTAACGCAGA ACGTGAGCGCAAGATGGGTGTGTTTGATGTGGAAGACGAGTACCTCGAGC AGCTCATTCTGTTTGGCTATGCGTCAATGTTTGTGACCGCCTTTCCCATC GCTCCGTTCATCATGCTCCTGAACAACTACGTGGAAATTCGCATTGACGG CGTCAAGATTCTGCAGCAATCCGTGCGTCCGATGCCAAACCCTGCTGCTG GGATTGGTGTGTGGTACGGCTTTTTCGAGTCGATTTCCTACATTTCCGTG GTCACAAAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92706:3..761-

>mRNA_M-pyrifera_M_contig92706.21446.1 ID=mRNA_M-pyrifera_M_contig92706.21446.1|Name=mRNA_M-pyrifera_M_contig92706.21446.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1518bp|location=Sequence derived from alignment at M-pyrifera_M_contig92706:3..761- (Macrocystis pyrifera P11B4 male)
ATCCGTGTGCTGTTGCATCGTGCAGAACAACGTGGTGAAGTCCCTGCACC
ATGGGGTGGATACTTGGCCTCCATCATCCAAGCCGTGATCATCATGGTGA
TGGACAAAATGTATGGTGCGTTTGCCACTTTCCTCACCGACTTTGAGAAC
CAACCAACGGATGTTGCTTACAACGCCTCACGTAACATCAAGGCATGGTG
TTTTCAATTCATCAACTCCTACTACGCCTTGTTTTGGATCATCACTGCAA
AGCAAGCCAATGTTACTATTTTTGGCGAAGTCCAGCAATGCCAACCAGAC
TGCCTTTCTGAACTCCAAAACTCGCTTGGATCGATCTTCCTCACCCGTGT
CCTCGTCAACAACTTCATGGAAGTTGGTCTTCCCATTGTAATGGGATGGA
TTGGAAATTGGCGTCAATCGTGTTGTGGATGTTGCTGCAAGCGAACAGAA
GAAGAAGAAAGACTTGCCTCCACGCCCGCTTCAAAAATCAGTAACGCAGA
ACGTGAGCGCAAGATGGGTGTGTTTGATGTGGAAGACGAGTACCTCGAGC
AGCTCATTCTGTTTGGCTATGCGTCAATGTTTGTGACCGCCTTTCCCATC
GCTCCGTTCATCATGCTCCTGAACAACTACGTGGAAATTCGCATTGACGG
CGTCAAGATTCTGCAGCAATCCGTGCGTCCGATGCCAAACCCTGCTGCTG
GGATTGGTGTGTGGTACGGCTTTTTCGAGTCGATTTCCTACATTTCCGTG
GTCACAAATATCCGTGTGCTGTTGCATCGTGCAGAACAACGTGGTGAAGT
CCCTGCACCATGGGGTGGATACTTGGCCTCCATCATCCAAGCCGTGATCA
TCATGGTGATGGACAAAATGTATGGTGCGTTTGCCACTTTCCTCACCGAC
TTTGAGAACCAACCAACGGATGTTGCTTACAACGCCTCACGTAACATCAA
GGCATGGTGTTTTCAATTCATCAACTCCTACTACGCCTTGTTTTGGATCA
TCACTGCAAAGCAAGCCAATGTTACTATTTTTGGCGAAGTCCAGCAATGC
CAACCAGACTGCCTTTCTGAACTCCAAAACTCGCTTGGATCGATCTTCCT
CACCCGTGTCCTCGTCAACAACTTCATGGAAGTTGGTCTTCCCATTGTAA
TGGGATGGATTGGAAATTGGCGTCAATCGTGTTGTGGATGTTGCTGCAAG
CGAACAGAAGAAGAAGAAAGACTTGCCTCCACGCCCGCTTCAAAAATCAG
TAACGCAGAACGTGAGCGCAAGATGGGTGTGTTTGATGTGGAAGACGAGT
ACCTCGAGCAGCTCATTCTGTTTGGCTATGCGTCAATGTTTGTGACCGCC
TTTCCCATCGCTCCGTTCATCATGCTCCTGAACAACTACGTGGAAATTCG
CATTGACGGCGTCAAGATTCTGCAGCAATCCGTGCGTCCGATGCCAAACC
CTGCTGCTGGGATTGGTGTGTGGTACGGCTTTTTCGAGTCGATTTCCTAC
ATTTCCGTGGTCACAAAT
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