mRNA_M-pyrifera_M_contig92682.21440.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92682.21440.1
Unique NamemRNA_M-pyrifera_M_contig92682.21440.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A2D8CG60_9BACT (Aminotransferase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CG60_9BACT)

HSP 1 Score: 381 bits (979), Expect = 6.220e-130
Identity = 178/253 (70.36%), Postives = 214/253 (84.58%), Query Frame = 1
Query:    1 ITYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            +TYLNCAYMSP +K+VE+AG+ G+ +K+ P+ ++ E+FF E++ LR+E+AKLIN +DP R VVIPS SYGMANVANN+TL EGD I+VVGEQFPSNVYPWRSV ++ G  I+TI PP+   NR K WNENIL+AIN KTKLVA G+IHWADGTLFDLK IR++T EVG+ L IDGTQSVGA+PFD+ ++Q DALI AGYK LMGPYSIG+AYYG A D G P+EENWINR+ESENFANLVNYND+YQP ALRY
Sbjct:   14 VTYLNCAYMSPQLKNVEQAGLLGVQRKRNPFTISPEEFFGETDTLREEYAKLINANDPKRIVVIPSVSYGMANVANNVTLSEGDNIVVVGEQFPSNVYPWRSVVKEKGGEIITITPPKDTENRGKTWNENILDAINEKTKLVAVGNIHWADGTLFDLKAIRERTNEVGAWLAIDGTQSVGALPFDVSEIQPDALICAGYKWLMGPYSIGLAYYGPALDDGNPVEENWINRYESENFANLVNYNDEYQPGALRY 266          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A3F3I6Q2_9BACT (Aminotransferase n=5 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3F3I6Q2_9BACT)

HSP 1 Score: 375 bits (964), Expect = 1.140e-127
Identity = 176/253 (69.57%), Postives = 210/253 (83.00%), Query Frame = 1
Query:    1 ITYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            +TYLNCAYMSP+M+ VE+AGI G+ KK+QP  ++G DFFSES+ELR EF+KLIN    ++CV+IPS SYGMANVA NL L  GD I+VVGEQFPSNVYPW  VAQ + A I+TI PP++   R K+WNE ILNAIN +T+LVACGHIHWADGT+FDL+ IR+KT EVG+ L +D TQS+GA+PFD++ L+ DALI AGYKSLMGPYSIGMAYY   FD+G PIE+NWINRFESENFANLVNYN +YQP ALRY
Sbjct:   14 VTYLNCAYMSPVMRCVEDAGIRGIRKKRQPNVISGSDFFSESDELRHEFSKLINAEHNNQCVIIPSVSYGMANVAKNLKLDRGDNIIVVGEQFPSNVYPWMEVAQNAEAEIITITPPKSISERGKLWNEKILNAINERTQLVACGHIHWADGTIFDLRSIRQKTYEVGAWLAVDATQSLGALPFDVQHLKPDALIAAGYKSLMGPYSIGMAYYSSEFDSGTPIEQNWINRFESENFANLVNYNANYQPGALRY 266          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A1B6YEF9_9BACT (Aminotransferase class V n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6YEF9_9BACT)

HSP 1 Score: 374 bits (961), Expect = 3.260e-127
Identity = 176/253 (69.57%), Postives = 209/253 (82.61%), Query Frame = 1
Query:    1 ITYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            ITYLNCAYMSPLM+SVEEAGI G+  K+QP  ++G+DFF+ESNELR EFA+LIN  +   CV+IPS SYGMANVA NL L++GD I+VVGEQFPSNVYPW  VAQK+ A I TI PP+T   R ++WN+ IL +I+ +TKLVACGHIHWADGT+FDL+ IR KT EVG+ L +D TQS+GA+PFD++ L+ DALI AGYKSLMGPYSIGMAYYG A   G PIE+NWINRFESENF+NLVNYN+ YQP ALRY
Sbjct:   14 ITYLNCAYMSPLMQSVEEAGIKGIKNKRQPNLISGQDFFTESNELRNEFAQLINCQESENCVIIPSVSYGMANVARNLKLQKGDNIIVVGEQFPSNVYPWMEVAQKADAEIKTISPPDTKTGRGELWNKQILESIDERTKLVACGHIHWADGTIFDLRSIRHKTYEVGAWLAVDATQSLGALPFDVQQLKPDALIAAGYKSLMGPYSIGMAYYGSALSYGNPIEQNWINRFESENFSNLVNYNEHYQPGALRY 266          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A3M8G660_9BACT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G660_9BACT)

HSP 1 Score: 373 bits (957), Expect = 1.270e-126
Identity = 173/253 (68.38%), Postives = 211/253 (83.40%), Query Frame = 1
Query:    1 ITYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            ITYLNCAYMSP+MK+VEEAG  GLL+K+QP ++  EDFF+E+ ELR+ FA+ +NV++P+R  ++ SASYG+ANVANNL L  GDEIL+VGEQFPSNVY WR VA +SGANI+T+P P  +  R   WN  ILNAI+ KTKLVAC H HW+DGTLFDLK IRK+T EVG+ L IDGTQ++GA+PFDI+++Q DALI +GYKSLMGPY IGMAYYG A D G+PIEENWINR++SE+F NLVNY+DDYQP ALRY
Sbjct:   14 ITYLNCAYMSPMMKTVEEAGHKGLLRKRQPNEIGAEDFFNEAEELRQAFAQFVNVTEPNRVAIVASASYGLANVANNLKLTSGDEILLVGEQFPSNVYSWRKVAAESGANIITVPAPPNSLERGTEWNTKILNAISPKTKLVACAHAHWSDGTLFDLKAIRKRTNEVGAWLAIDGTQTIGALPFDIEEIQPDALIASGYKSLMGPYGIGMAYYGPALDGGVPIEENWINRYKSEDFRNLVNYSDDYQPGALRY 266          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A2D9FRD9_9BACT (Aminotransferase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FRD9_9BACT)

HSP 1 Score: 367 bits (942), Expect = 2.330e-124
Identity = 177/252 (70.24%), Postives = 206/252 (81.75%), Query Frame = 1
Query:    4 TYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            TYLNCAYMSP +K VEEAGI GL +K+ P+K++ E+FF E+++LRKE+AKLIN  DP R VVIPS SYGMANVA NL L +GD I+VVGEQFPSN+YPWRSVA + GA I+TI PP +   R K WNE I+NAIN KTKLVA  ++HWADGT F+L+ IR  T+ VG+ L IDGTQSVGA+PFDIK +Q DALI AGYK LMGPYSIG+AYYG A D G P+EENWINR+ESENFANLVNYNDDYQP ALRY
Sbjct:   15 TYLNCAYMSPQLKVVEEAGIEGLQRKRDPFKISPEEFFGETDQLRKEYAKLINAEDPKRIVVIPSVSYGMANVAKNLPLSKGDNIIVVGEQFPSNIYPWRSVASEKGAEIITITPPNSEE-RGKGWNEKIMNAINEKTKLVAIANVHWADGTRFNLQAIRTLTRNVGAWLAIDGTQSVGALPFDIKKIQPDALICAGYKWLMGPYSIGLAYYGPALDEGDPVEENWINRYESENFANLVNYNDDYQPGALRY 265          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: UPI000CD8B508 (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD8B508)

HSP 1 Score: 362 bits (930), Expect = 1.600e-122
Identity = 172/252 (68.25%), Postives = 203/252 (80.56%), Query Frame = 1
Query:    4 TYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            TYLNCAYMSPLMK VEEAG  G+ +K+ P+ ++ E+FF E+  LR EFAKLIN SDP R V IPS SYGMANVA NL L +GD I+VVGEQFPSNVYPW   A  + A I+TI PP+T  +R K WN+ IL AIN+ TKLVA  ++HWADGTLFDLKKIR++T EVG+ L IDGTQSVGA+PFD+++++ DALI AGYK LMGPYSIGMAYYG A D G P+EENWINR+ESE+F+NLVNYND YQP ALRY
Sbjct:   15 TYLNCAYMSPLMKRVEEAGHAGVERKRNPFNISPEEFFGETETLRGEFAKLINASDPKRVVTIPSVSYGMANVAKNLPLSQGDNIIVVGEQFPSNVYPWMKAADNNNAEIITITPPDTKKDRGKTWNQLILEAINANTKLVAVANVHWADGTLFDLKKIRERTHEVGARLAIDGTQSVGALPFDVEEIKPDALICAGYKWLMGPYSIGMAYYGPALDGGEPVEENWINRYESEDFSNLVNYNDQYQPGALRY 266          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A521BB47_9BACT (Selenocysteine lyase/Cysteine desulfurase n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521BB47_9BACT)

HSP 1 Score: 360 bits (925), Expect = 9.170e-122
Identity = 170/253 (67.19%), Postives = 203/253 (80.24%), Query Frame = 1
Query:    1 ITYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            +TYLNCA+MSP +K VEEAGI G+ +KQ P +V  +DFF E+ +LR+ FAKLIN  + +R V IPS SYGMANVA+NL+L  GD I++VGEQFPSNVYPW   A++SG  I+TI PPET  NR K+WNE IL AI  KTKLVA  ++HWADGTLFDLK IRK+T E+ + L IDGTQSVGA+PFD++++Q DALI AGYK LMGPYSIG+AYYG A D G P+EENWINR+ESENFA LVNYND YQP ALRY
Sbjct:   14 VTYLNCAFMSPQLKVVEEAGIEGIQRKQNPQQVTSDDFFGETEKLREAFAKLINAKESNRIVTIPSVSYGMANVAHNLSLSRGDTIVLVGEQFPSNVYPWMRAAEESGTEIITITPPETTENRGKVWNERILEAITPKTKLVAVANVHWADGTLFDLKAIRKRTLEIDAWLAIDGTQSVGALPFDVQEIQPDALICAGYKWLMGPYSIGLAYYGPALDEGKPVEENWINRYESENFAGLVNYNDAYQPGALRY 266          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: UPI00037E6463 (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00037E6463)

HSP 1 Score: 356 bits (913), Expect = 5.880e-120
Identity = 170/253 (67.19%), Postives = 208/253 (82.21%), Query Frame = 1
Query:    1 ITYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            +TYLNCAYMSP +K VEEAG  GL +K+ P++++ E+FF E+++LR+E+AKLI+ +D  R VVIPS SYGMANVA NL L +GD I+VVGEQFPSNVYPWRSVA + GA I+TI PP +  +R K WNE I+NAI  KTKLVA G++HWADGT F+L+ IR+ TK+VG+ L IDGTQSVGA+PFD+ ++Q DALI AGYK LMGPYS+G+AYYG A D G PIEENWINRFESE+F+NLVNYND YQP ALRY
Sbjct:   14 VTYLNCAYMSPQLKVVEEAGTEGLKRKRNPFQISPEEFFGETDQLREEYAKLIHAADAKRIVVIPSVSYGMANVARNLPLSKGDNIIVVGEQFPSNVYPWRSVASEKGAEIITITPPNSK-DRGKEWNEKIMNAITKKTKLVALGNVHWADGTRFNLQAIRQLTKDVGAWLAIDGTQSVGALPFDVAEIQPDALICAGYKWLMGPYSLGLAYYGPALDEGSPIEENWINRFESEDFSNLVNYNDKYQPGALRY 265          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A6A8Q6H0_9BACT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q6H0_9BACT)

HSP 1 Score: 352 bits (904), Expect = 1.560e-118
Identity = 164/253 (64.82%), Postives = 207/253 (81.82%), Query Frame = 1
Query:    1 ITYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            +TYLNC YMSP +K VEEAGI GL  K+ P+ ++ +DFF ++  LR EFAK IN ++ +R  VIPS SYGMANVA+NL+L  GDEI+VVGEQFPSNVYPW+S+A+K+ A I+T+  P+T  +R +IWNE I+ AIN +TKLVA G+IHWADGTLFDLK IRKK++E  + LVIDGTQSVGA+PFD+++++ DAL+ AGYK LMGPYS+G+AYYG A D G P+EENWINR++SE+FANLVNYND YQ  ALRY
Sbjct:   14 VTYLNCGYMSPQLKRVEEAGIKGLKAKRNPFNISTDDFFGQTERLRTEFAKTINAAEANRITVIPSVSYGMANVAHNLSLSFGDEIVVVGEQFPSNVYPWQSLARKTNAKIITVSAPDTLKDRGRIWNEEIIEAINPRTKLVALGNIHWADGTLFDLKSIRKKSREYNAWLVIDGTQSVGALPFDVQEIEPDALVCAGYKWLMGPYSMGLAYYGSALDEGTPVEENWINRYKSEDFANLVNYNDGYQHGALRY 266          
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Match: A0A371QT40_9BACT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Rhodohalobacter sp. SW132 TaxID=2293433 RepID=A0A371QT40_9BACT)

HSP 1 Score: 348 bits (892), Expect = 8.720e-117
Identity = 165/252 (65.48%), Postives = 203/252 (80.56%), Query Frame = 1
Query:    4 TYLNCAYMSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDPHRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSGANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLKKIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSIGMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY 759
            TYLNCAYMSP + +VE+AGI G+ +K+ P+K++ E FF E+  LRKE+AKLIN S+P R VVIPS SYGMANVA NL L  G+ I+V  EQFPSN+YPWRS+A    A I+T+ PP    +R K WNE IL +IN KTK+VA G++HWADGTLFDLK+IRK+T++VG+ LVIDGTQSVGA+P D+++++ DALI AGYK LMGPYSIG+AYYG A D G P+EENWINR+ESENFA LVNY+D YQP ALRY
Sbjct:   15 TYLNCAYMSPQLNTVEKAGIEGVRRKRNPFKISAELFFDETETLRKEYAKLINASEPRRIVVIPSVSYGMANVARNLPLSRGENIIVADEQFPSNIYPWRSLADDKNAEIITVTPP-AGPSRGKRWNEMILESINPKTKMVAIGNVHWADGTLFDLKQIRKRTRDVGAWLVIDGTQSVGALPIDVEEIEPDALICAGYKWLMGPYSIGLAYYGPAMDDGKPVEENWINRYESENFAGLVNYSDRYQPGALRY 265          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92682.21440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8CG60_9BACT6.220e-13070.36Aminotransferase n=2 Tax=Balneolaceae TaxID=181360... [more]
A0A3F3I6Q2_9BACT1.140e-12769.57Aminotransferase n=5 Tax=Bacteroidetes/Chlorobi gr... [more]
A0A1B6YEF9_9BACT3.260e-12769.57Aminotransferase class V n=1 Tax=Balneola sp. EhC0... [more]
A0A3M8G660_9BACT1.270e-12668.38Aminotransferase class V-fold PLP-dependent enzyme... [more]
A0A2D9FRD9_9BACT2.330e-12470.24Aminotransferase n=2 Tax=Balneolaceae TaxID=181360... [more]
UPI000CD8B5081.600e-12268.25aminotransferase class V-fold PLP-dependent enzyme... [more]
A0A521BB47_9BACT9.170e-12267.19Selenocysteine lyase/Cysteine desulfurase n=1 Tax=... [more]
UPI00037E64635.880e-12067.19aminotransferase class V-fold PLP-dependent enzyme... [more]
A0A6A8Q6H0_9BACT1.560e-11864.82Aminotransferase class V-fold PLP-dependent enzyme... [more]
A0A371QT40_9BACT8.720e-11765.48Aminotransferase class V-fold PLP-dependent enzyme... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92682contigM-pyrifera_M_contig92682:3..761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score341.7
Seed ortholog evalue2.9e-91
Seed eggNOG ortholog1121930.AQXG01000004_gene2972
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Aminotransferase class-V
EggNOG OGs1IW66@117747,4NJEQ@976,COG0520@1,COG0520@2
COG Functional cat.E
Best tax levelSphingobacteriia
Best eggNOG OGNA|NA|NA
Exons1
Model size759
Cds size735
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816839.9632504-UTR-M-pyrifera_M_contig92682:2..261622816839.9632504-UTR-M-pyrifera_M_contig92682:2..26Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92682 3..26 +
1692278209.1743674-UTR-M-pyrifera_M_contig92682:2..261692278209.1743674-UTR-M-pyrifera_M_contig92682:2..26Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92682 3..26 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816839.974463-CDS-M-pyrifera_M_contig92682:26..7611622816839.974463-CDS-M-pyrifera_M_contig92682:26..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92682 27..761 +
1692278209.1844738-CDS-M-pyrifera_M_contig92682:26..7611692278209.1844738-CDS-M-pyrifera_M_contig92682:26..761Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92682 27..761 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92682.21440.1prot_M-pyrifera_M_contig92682.21440.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92682 27..761 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92682.21440.1

>prot_M-pyrifera_M_contig92682.21440.1 ID=prot_M-pyrifera_M_contig92682.21440.1|Name=mRNA_M-pyrifera_M_contig92682.21440.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
MSPLMKSVEEAGITGLLKKQQPWKVNGEDFFSESNELRKEFAKLINVSDP
HRCVVIPSASYGMANVANNLTLREGDEILVVGEQFPSNVYPWRSVAQKSG
ANIVTIPPPETNHNRAKIWNENILNAINSKTKLVACGHIHWADGTLFDLK
KIRKKTKEVGSLLVIDGTQSVGAVPFDIKDLQVDALIVAGYKSLMGPYSI
GMAYYGEAFDAGIPIEENWINRFESENFANLVNYNDDYQPAALRY
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mRNA from alignment at M-pyrifera_M_contig92682:3..761+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92682.21440.1 ID=mRNA_M-pyrifera_M_contig92682.21440.1|Name=mRNA_M-pyrifera_M_contig92682.21440.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=759bp|location=Sequence derived from alignment at M-pyrifera_M_contig92682:3..761+ (Macrocystis pyrifera P11B4 male)
ATCACTTATTTAAACTGTGCGTATATGTCACCTTTAATGAAATCGGTTGA AGAAGCGGGTATTACAGGCCTTCTTAAAAAGCAACAACCGTGGAAAGTTA ATGGTGAAGATTTCTTTTCTGAATCGAATGAACTTAGAAAAGAATTTGCC AAGCTGATTAATGTTTCTGATCCTCATCGCTGTGTAGTTATACCTTCTGC TTCTTATGGAATGGCGAATGTGGCAAATAATTTAACCTTAAGAGAAGGTG ATGAAATTCTGGTTGTTGGCGAACAGTTTCCGAGTAATGTATATCCATGG AGATCTGTAGCTCAGAAATCCGGAGCTAACATTGTAACCATCCCTCCTCC TGAAACCAATCATAATCGGGCTAAGATTTGGAACGAGAACATTCTAAATG CCATCAATTCTAAAACGAAACTTGTTGCCTGTGGACATATTCACTGGGCT GATGGAACACTCTTTGATCTTAAAAAAATCAGAAAAAAAACGAAAGAAGT GGGTTCTCTTTTAGTAATTGATGGAACTCAATCTGTTGGAGCAGTTCCTT TTGATATAAAAGATTTACAAGTAGATGCTCTGATTGTTGCAGGTTATAAA TCTTTGATGGGTCCTTACAGCATTGGAATGGCGTATTATGGAGAAGCTTT TGATGCTGGAATTCCTATTGAGGAAAATTGGATTAATCGGTTTGAAAGCG AGAATTTTGCAAATTTAGTAAATTATAATGATGACTATCAACCTGCTGCC TTACGGTAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92682:3..761+

>mRNA_M-pyrifera_M_contig92682.21440.1 ID=mRNA_M-pyrifera_M_contig92682.21440.1|Name=mRNA_M-pyrifera_M_contig92682.21440.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig92682:3..761+ (Macrocystis pyrifera P11B4 male)
ATGTCACCTTTAATGAAATCGGTTGAAGAAGCGGGTATTACAGGCCTTCT
TAAAAAGCAACAACCGTGGAAAGTTAATGGTGAAGATTTCTTTTCTGAAT
CGAATGAACTTAGAAAAGAATTTGCCAAGCTGATTAATGTTTCTGATCCT
CATCGCTGTGTAGTTATACCTTCTGCTTCTTATGGAATGGCGAATGTGGC
AAATAATTTAACCTTAAGAGAAGGTGATGAAATTCTGGTTGTTGGCGAAC
AGTTTCCGAGTAATGTATATCCATGGAGATCTGTAGCTCAGAAATCCGGA
GCTAACATTGTAACCATCCCTCCTCCTGAAACCAATCATAATCGGGCTAA
GATTTGGAACGAGAACATTCTAAATGCCATCAATTCTAAAACGAAACTTG
TTGCCTGTGGACATATTCACTGGGCTGATGGAACACTCTTTGATCTTAAA
AAAATCAGAAAAAAAACGAAAGAAGTGGGTTCTCTTTTAGTAATTGATGG
AACTCAATCTGTTGGAGCAGTTCCTTTTGATATAAAAGATTTACAAGTAG
ATGCTCTGATTGTTGCAGGTTATAAATCTTTGATGGGTCCTTACAGCATT
GGAATGGCGTATTATGGAGAAGCTTTTGATGCTGGAATTCCTATTGAGGA
AAATTGGATTAATCGGTTTGAAAGCGAGAATTTTGCAAATTTAGTAAATT
ATAATGATGACTATCAACCTGCTGCCTTACGGTATATGTCACCTTTAATG
AAATCGGTTGAAGAAGCGGGTATTACAGGCCTTCTTAAAAAGCAACAACC
GTGGAAAGTTAATGGTGAAGATTTCTTTTCTGAATCGAATGAACTTAGAA
AAGAATTTGCCAAGCTGATTAATGTTTCTGATCCTCATCGCTGTGTAGTT
ATACCTTCTGCTTCTTATGGAATGGCGAATGTGGCAAATAATTTAACCTT
AAGAGAAGGTGATGAAATTCTGGTTGTTGGCGAACAGTTTCCGAGTAATG
TATATCCATGGAGATCTGTAGCTCAGAAATCCGGAGCTAACATTGTAACC
ATCCCTCCTCCTGAAACCAATCATAATCGGGCTAAGATTTGGAACGAGAA
CATTCTAAATGCCATCAATTCTAAAACGAAACTTGTTGCCTGTGGACATA
TTCACTGGGCTGATGGAACACTCTTTGATCTTAAAAAAATCAGAAAAAAA
ACGAAAGAAGTGGGTTCTCTTTTAGTAATTGATGGAACTCAATCTGTTGG
AGCAGTTCCTTTTGATATAAAAGATTTACAAGTAGATGCTCTGATTGTTG
CAGGTTATAAATCTTTGATGGGTCCTTACAGCATTGGAATGGCGTATTAT
GGAGAAGCTTTTGATGCTGGAATTCCTATTGAGGAAAATTGGATTAATCG
GTTTGAAAGCGAGAATTTTGCAAATTTAGTAAATTATAATGATGACTATC
AACCTGCTGCCTTACGGTAT
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