mRNA_M-pyrifera_M_contig92653.21439.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A5A8DEC5_CAFRO (Anaphase-promoting complex subunit 11 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DEC5_CAFRO) HSP 1 Score: 129 bits (325), Expect = 1.220e-36 Identity = 53/87 (60.92%), Postives = 66/87 (75.86%), Query Frame = 1 Query: 16 VYFAEWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSR-DAGNRTCPLCRQPWELLTYES 273 V W+PVA+W+W+VPDETCGICM D AP +FPGDE PVFGRC HAFH+ C+M+WL+SR DA + CPLCRQPWE + ++S Sbjct: 8 VTIKSWTPVAIWKWEVPDETCGICMADMDGCAPGVKFPGDECPPVFGRCGHAFHMPCLMKWLESRTDATGQICPLCRQPWEFVEFKS 94
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A0D2U3L1_CAPO3 (Anaphase-promoting complex subunit 11 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U3L1_CAPO3) HSP 1 Score: 102 bits (255), Expect = 7.300e-27 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 28 EWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWEL 258 WS VAVWRWKV D+TCGIC M FD + PGDE V+G+CKH FH+ C+++W+ S +A N+ CP+CRQ W+ Sbjct: 7 NWSAVAVWRWKVDDDTCGICRMAFDGCCTDCRLPGDECPLVWGQCKHCFHMHCILKWVHSPNA-NQLCPMCRQEWKF 82
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: W7T4Y4_9STRA (Anaphase-promoting complex subunit 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4Y4_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.700e-26 Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 16 VYFAEWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNR-TCPLCRQPWEL 258 V W VA W+W V DE CGIC F+ P PGD+ PV+G C HAFH+ C+M+WL+S+ N+ TCP CRQ WE Sbjct: 3 VKIKRWHAVATWQWDVNDERCGICYTAFEACCPDCHIPGDDCPPVWGGCNHAFHMHCIMKWLNSQQNANKQTCPACRQKWEF 84
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A0G4IMP5_PLABS (Anaphase-promoting complex subunit 11 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IMP5_PLABS) HSP 1 Score: 99.8 bits (247), Expect = 1.510e-25 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 28 EWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWE 255 W VAVWRWKV +E+CGIC PFD P PGD+ PV+G C H FHI C+++WL + + + CPLCR+ W+ Sbjct: 7 NWRAVAVWRWKVDEESCGICCQPFDGCCPACVSPGDDCPPVWGECNHTFHIHCILKWLKEQ-SSRQQCPLCRRDWQ 81
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A5B8MNM4_9CHLO (Anaphase-promoting complex subunit 11 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MNM4_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 1.110e-24 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 28 EWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWEL 258 W +A W W D+ CGIC PFD +P A++PGD+S V+G C+HAFH+QC+ QWL S+ + CP+CRQ WE Sbjct: 29 HWRTLASWSWNAGDDVCGICRNPFDGCSPEAKYPGDDSPVVWGTCRHAFHLQCITQWLSSQT--EQRCPICRQNWEF 103
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A7S2Z1G7_9CHLO (Anaphase-promoting complex subunit 11 n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z1G7_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 1.350e-24 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 28 EWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWEL 258 W +A W W D+ CGIC PFD +P A++PGD+S V+G C+HAFH+QC+ QWL S+ + CP+CRQ WE Sbjct: 34 HWRTLASWSWNAGDDVCGICRNPFDGCSPEAKYPGDDSPVVWGTCRHAFHLQCITQWLSSQT--EQRCPICRQNWEF 108
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A8J6E1M7_9EUKA (Anaphase-promoting complex subunit 11 n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E1M7_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 2.050e-24 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 28 EWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWEL 258 +W VA W+W +++CGIC MPF++ P PGD+ G+C HAFHI C+M+WL++ G CPLCRQP+E Sbjct: 7 DWHTVAKWKWLKSEDSCGICQMPFEMACPKCTIPGDDCPVALGKCSHAFHIHCIMKWLEN---GRTECPLCRQPFEF 80
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A6P5TTJ2_PRUAV (Anaphase-promoting complex subunit 11 n=2 Tax=Prunus TaxID=3754 RepID=A0A6P5TTJ2_PRUAV) HSP 1 Score: 97.4 bits (241), Expect = 2.500e-24 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 7 LVWVYFAEWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWEL 258 L W + EW VA W W DETCGIC M FD P + PGD+ ++G C HAFH+ C+++W++S+ CP+CR+ W+ Sbjct: 31 LAWAFQTEWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ-TSQAHCPMCRREWQF 113
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: F4PL87_CAVFA (Anaphase-promoting complex subunit 11 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PL87_CAVFA) HSP 1 Score: 95.9 bits (237), Expect = 4.250e-24 Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 16 VYFAEWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWELLTYE 270 V +W V+ W W V +E CGIC M FD + PGD+ PV+G CKHAFH+ C+++WL+S + CP+CR WE +T + Sbjct: 3 VTIRKWQTVSSWHWDVSEECCGICRMQFDACCVDCKMPGDDCPPVWGACKHAFHMHCILKWLNS---NQQQCPMCRSNWEFVTTD 84
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Match: A0A3B6KSJ6_WHEAT (Anaphase-promoting complex subunit 11 n=5 Tax=Poaceae TaxID=4479 RepID=A0A3B6KSJ6_WHEAT) HSP 1 Score: 95.1 bits (235), Expect = 8.580e-24 Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 16 VYFAEWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVFGRCKHAFHIQCVMQWLDSRDAGNRTCPLCRQPWEL 258 V +W VA W W DETCGIC M FD P +FPGDE ++G C HAFH+ C+++W++S+ CP+CR+ W+ Sbjct: 3 VKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDECPIIWGACNHAFHLHCILKWVNSQ-TSTALCPMCRREWQF 82 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92653.21439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92653.21439.1 >prot_M-pyrifera_M_contig92653.21439.1 ID=prot_M-pyrifera_M_contig92653.21439.1|Name=mRNA_M-pyrifera_M_contig92653.21439.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=91bp MVLVWVYFAEWSPVAVWRWKVPDETCGICMMPFDVPAPTAQFPGDESQPVback to top mRNA from alignment at M-pyrifera_M_contig92653:289..561- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92653.21439.1 ID=mRNA_M-pyrifera_M_contig92653.21439.1|Name=mRNA_M-pyrifera_M_contig92653.21439.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=273bp|location=Sequence derived from alignment at M-pyrifera_M_contig92653:289..561- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92653:289..561- >mRNA_M-pyrifera_M_contig92653.21439.1 ID=mRNA_M-pyrifera_M_contig92653.21439.1|Name=mRNA_M-pyrifera_M_contig92653.21439.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig92653:289..561- (Macrocystis pyrifera P11B4 male)back to top |