mRNA_M-pyrifera_M_contig92646.21436.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92646.21436.1
Unique NamemRNA_M-pyrifera_M_contig92646.21436.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A7Y5C550_9BACT (HD domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C550_9BACT)

HSP 1 Score: 382 bits (980), Expect = 3.710e-127
Identity = 186/254 (73.23%), Postives = 217/254 (85.43%), Query Frame = 1
Query:    1 EKSVDLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            EK  +L+VE         EV +S SIV RA + GEA+ITYNAA D RF+AGASIIAQNI+SAMC PL HQ+  LGV+YVDTRGT NAF Q+DLELLVA+SGPAAIAIRNAQY+ K+ K+YQDTL+ALAN++ELRDHYTVGHTWRVTNFALE+A+ LGW  +KL+E EMGGVLHD+GKIS+DDA+LRKPG LTD+E+E MKVHP++GARL+QDIE L P IPY LYHHERFDG+GYPFGL GE+IPIEGRLLAVA
Sbjct:  204 EKKGELIVEFVQQGEGQGEVAMSQSIVKRAFEQGEAIITYNAADDARFDAGASIIAQNITSAMCVPLTHQNARLGVIYVDTRGTRNAFAQTDLELLVALSGPAAIAIRNAQYLAKLHKSYQDTLIALANSIELRDHYTVGHTWRVTNFALEIARALGWTDDKLKECEMGGVLHDIGKISVDDAVLRKPGHLTDEEFEKMKVHPEKGARLLQDIEFLAPCIPYALYHHERFDGRGYPFGLKGEEIPIEGRLLAVA 457          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A7V2Y4U2_9BACT (FHA domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y4U2_9BACT)

HSP 1 Score: 373 bits (957), Expect = 3.550e-124
Identity = 182/254 (71.65%), Postives = 218/254 (85.83%), Query Frame = 1
Query:    1 EKSVDLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            EKS +L+ E+   KS      ISS+IVSRA ++GEA++T +AA D RFEAGASIIAQNISSAMC PL HQ E LG +YVDTRGT NAFT+SDLELLVA+SGPAA+AIRNAQY+ K+++AY DTL+A ANAVE+RDHYTVGHTWRVTNFALE+ + LGW  E+L++ EMGGVLHDVGKI++DDAILRKPG LTD+EY  MK+HP+RGA  ++DIE L PL+PYCLYHHER+DGKGYPFGLAG+DIP+EGRL+AVA
Sbjct:  194 EKSGELITEYV--KSGSGNTVISSTIVSRAFEHGEAILTVDAADDARFEAGASIIAQNISSAMCTPLTHQGERLGALYVDTRGTTNAFTKSDLELLVALSGPAAVAIRNAQYLHKLERAYHDTLIATANAVEMRDHYTVGHTWRVTNFALEIMRGLGWTEEQLKQGEMGGVLHDVGKIAVDDAILRKPGKLTDEEYAKMKIHPERGATYLRDIEFLKPLVPYCLYHHERYDGKGYPFGLAGKDIPLEGRLIAVA 445          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A7C3AQB0_9BACT (HD domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3AQB0_9BACT)

HSP 1 Score: 374 bits (961), Expect = 7.250e-124
Identity = 171/233 (73.39%), Postives = 214/233 (91.85%), Query Frame = 1
Query:   64 ISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            ISSSIV+RA +NGEAV+TY+AA+D RFEAGASII Q I+SAMC PL HQ++ LG+VYVDTRGT NAF   DLELLVA++GPAAIAIRNAQY+  +++AY++TL++LANA+E+RDHYTVGHTWRVTNFA+E+A+ELGWPPE+L+EV+MGGVLHD+GK+++DDAILRKP  LT++EYE MK+HP+RGA+L+QD+++L PLIPYCLYHHER+DGKGYPFGL  EDIPIEGR+L+VA
Sbjct:  263 ISSSIVNRAFENGEAVLTYDAAEDSRFEAGASIITQKIASAMCVPLMHQNDRLGIVYVDTRGTTNAFVSGDLELLVALAGPAAIAIRNAQYLHMVEQAYEETLISLANAIEMRDHYTVGHTWRVTNFAMEIARELGWPPERLKEVQMGGVLHDIGKLAVDDAILRKPDRLTEEEYEKMKIHPERGAQLLQDVKSLHPLIPYCLYHHERYDGKGYPFGLTEEDIPIEGRILSVA 495          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A831USS7_9BACT (HD domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831USS7_9BACT)

HSP 1 Score: 370 bits (949), Expect = 1.550e-123
Identity = 179/254 (70.47%), Postives = 218/254 (85.83%), Query Frame = 1
Query:    1 EKSVDLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            EK+ +LV E+  S+S  +EV ISS IVS+A + GEA++T +AA D RFE G SII QNISSAMCAPL HQDE+LGV+YVDTRGT NAF Q D+ELLV V+GPAAIAI+NAQYV ++++AY+DTL AL+NAVELRDHYTVGHTWRVTNFA+E+AK LGW  E+L+ VE GG+LHDVGKI +D+AIL KPG LTD+EYE MKVHP+RGA+LM+DI+ L P++PYCLYHHER+DG+GYP+GL GE+IPIEGRL AVA
Sbjct:  146 EKTGELVTEYVKSRSGNAEVVISSQIVSQAAERGEAILTLDAADDSRFERGMSIITQNISSAMCAPLMHQDESLGVLYVDTRGTTNAFEQGDVELLVGVAGPAAIAIKNAQYVNELERAYEDTLKALSNAVELRDHYTVGHTWRVTNFAIEIAKALGWNEERLQSVERGGLLHDVGKIGVDNAILSKPGRLTDEEYEKMKVHPERGAQLMRDIKLLRPIVPYCLYHHERYDGRGYPYGLKGEEIPIEGRLTAVA 399          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A1V5ZI47_9BACT (Cyclic di-GMP phosphodiesterase response regulator RpfG n=2 Tax=unclassified Candidatus Hydrogenedentes TaxID=1046981 RepID=A0A1V5ZI47_9BACT)

HSP 1 Score: 337 bits (865), Expect = 3.310e-110
Identity = 159/254 (62.60%), Postives = 212/254 (83.46%), Query Frame = 1
Query:    1 EKSVDLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            E++ +L  E+  S +PG+++ +SS+IV+R  DNGEA+IT NA +D RF +GASIIA+NISSAMC PL H+ E LGV+YVD  G  +AFT +DLELLVA++G AA AI+NA++++ +++AYQDTL ALANA+ELRDHYTVGHTWRVTNFA+E+A++LGW   K+ EV+ GGVLHDVGKI++D+AIL K   L++ E+  MKVHP+RGA L++D++ L P+IPYCLYHHER+DG+GYP+GL GEDIP+EGRL+AVA
Sbjct:  196 EETGELAAEYVRSAAPGAKIHVSSTIVNRCYDNGEAIITSNAPKDSRFGSGASIIAENISSAMCVPLTHRGERLGVIYVDNHGENSAFTNNDLELLVALAGSAATAIKNARFLRILEEAYQDTLAALANAIELRDHYTVGHTWRVTNFAMEIARDLGWDEAKINEVQKGGVLHDVGKIAVDNAILAKTSRLSEAEFAQMKVHPERGADLLRDVKFLHPIIPYCLYHHERWDGRGYPYGLKGEDIPVEGRLIAVA 449          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A7V2TRP3_9BACT (HD domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2TRP3_9BACT)

HSP 1 Score: 332 bits (852), Expect = 6.010e-108
Identity = 162/250 (64.80%), Postives = 201/250 (80.40%), Query Frame = 1
Query:   13 DLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            +L   +Q S    + V  S +IV R+  + EAVIT NA  D RF +G SIIA NI SA+CAPL HQ E LGV+YVD+ G  NAFT SDL+LLVA++GPAA AI+NAQYV  +++AY+DTLV LANA+ELRDHYTVGHTWRVT+FA+ +A+ELGW  EK++EV MGGV+HDVGKI++D+AIL K G LT++E+  MKVHP+RGA L++D+  L PLIPYCLYHHER+DGKGYP+GL GEDIPIEGRL+AVA
Sbjct:  224 ELYPAYQKSTESDNNVSYSHTIVERSFRHAEAVITNNAFDDSRFRSGVSIIAHNIRSAICAPLLHQSECLGVIYVDSHGRQNAFTDSDLQLLVALAGPAATAIKNAQYVSLLEQAYEDTLVVLANAIELRDHYTVGHTWRVTHFAMAIARELGWDEEKIKEVRMGGVMHDVGKIAVDNAILSKAGPLTEEEFAKMKVHPERGADLLRDVCVLQPLIPYCLYHHERWDGKGYPYGLKGEDIPIEGRLVAVA 473          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A7C3X2X8_9BACT (HD domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3X2X8_9BACT)

HSP 1 Score: 332 bits (850), Expect = 7.920e-108
Identity = 157/237 (66.24%), Postives = 200/237 (84.39%), Query Frame = 1
Query:   55 EVQISSSIVSRALDNGEAVITYNAAQDQRFE-AGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            E  IS++IV+RA +  EA+IT NA +D RF+    SII   I+SAMC PL +Q++ LGV+YVDTRGT+ AF+Q DLE+LVA++GPAAIA+RNAQY++ I+++Y+DTL  +ANAVELRDHYT+GHTWRVTNF++E+AK LGW  EK+EEV MGGVLHDVGKI++DDAILRKPG LTD+E+E MK+HP RGA L++DI    P+IPYCLYHHER+DGKGYP+GL G++IP EGRL+AVA
Sbjct:  210 EFSISATIVNRAFEKREALITQNAGEDSRFKNISGSIIRHRIASAMCVPLVYQNQCLGVIYVDTRGTSRAFSQEDLEMLVAIAGPAAIALRNAQYIEMIKQSYKDTLTTIANAVELRDHYTIGHTWRVTNFSIEIAKVLGWSEEKIEEVYMGGVLHDVGKIAVDDAILRKPGQLTDEEFEKMKIHPLRGADLLRDIALFQPIIPYCLYHHERYDGKGYPYGLKGKEIPPEGRLVAVA 446          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A2A5D032_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5D032_9BACT)

HSP 1 Score: 324 bits (831), Expect = 7.070e-105
Identity = 151/236 (63.98%), Postives = 198/236 (83.90%), Query Frame = 1
Query:   55 EVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            ++++SSSI+ RA ++GEA+I  +AA D RF+  ASI+  NI+SA+CAPL  ++E LG +YVDTRGT NAF   DLELLVA++  AAIAI+NAQYV++++  +Q TL  LANA+E+RDHYT+GHTWRVT +++E+A+E+GW  EK+ EV+MGGVLHDVGKI+I+DAILRKP  LT+DEY+ MK+HP+RGA LM+D + L  LIPYCLYHHER+DGKGYP+GL GEDIPIEGR++AVA
Sbjct:  214 DIRVSSSIIKRAYEDGEAMIVRDAAMDDRFDPSASIMLANITSALCAPLTCKEEKLGAIYVDTRGTPNAFAHEDLELLVALANSAAIAIKNAQYVEQLESDFQTTLKLLANAIEMRDHYTLGHTWRVTGYSMEIAREMGWDEEKVGEVQMGGVLHDVGKIAIEDAILRKPDRLTEDEYDKMKIHPERGAALMKDCKKLEALIPYCLYHHERYDGKGYPYGLVGEDIPIEGRVVAVA 449          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A1V5YZT3_9BACT (Cyclic di-GMP phosphodiesterase response regulator RpfG n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YZT3_9BACT)

HSP 1 Score: 323 bits (827), Expect = 1.630e-104
Identity = 156/250 (62.40%), Postives = 201/250 (80.40%), Query Frame = 1
Query:   13 DLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            +L VE   ++ P + V +SSSI++R  +NGEA++T +AA+      G SII QNISS+MC PL HQ E LGV+YVD  G  NAF  SDLELLVA++  AA AI+NAQY+++++++YQDTL+ALANA+ELRDHYTVGHTWRVTN A+EMA+ELGW  EK++EV+ GGVLHDVGKI++D+AIL KP  LT++E+  MKVHP+RGA L++DI+ L P+IPYCLYHHE++DG GYPFGL  E IP EGRL+AVA
Sbjct:  199 ELSVEFVHNRDPETTVHVSSSIITRVFENGEAILTNSAAEGMGMGGGESIIQQNISSSMCVPLTHQSECLGVIYVDNHGLDNAFNDSDLELLVALAASAASAIKNAQYLKQLEQSYQDTLLALANAIELRDHYTVGHTWRVTNIAMEMARELGWDEEKIKEVQTGGVLHDVGKIAVDNAILCKPAPLTEEEFAQMKVHPERGADLLRDIKFLKPMIPYCLYHHEKWDGSGYPFGLKEEYIPQEGRLMAVA 448          
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Match: A0A445N2J1_9DELT (Putative HD-GYP domain protein n=1 Tax=uncultured Desulfobacterium sp. TaxID=201089 RepID=A0A445N2J1_9DELT)

HSP 1 Score: 322 bits (824), Expect = 3.570e-104
Identity = 158/254 (62.20%), Postives = 195/254 (76.77%), Query Frame = 1
Query:    1 EKSVDLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEAGASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVSGPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFALEMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMKVHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRLLAVA 762
            EK+  + + +  S S   ++ ISS+IV RA++N EA+IT NA  D RF+   SII  NISSAMCAPL + +E LG +YVD RG  N F   DLELLVA++GPAAIAI+N  YV ++ + Y+DTLV LANA+ELRDHYT GH WRVTNFA+EMA+ELGW  E+++ VEMGGVLHD+GKIS+D+AIL K G LT +EYE +K+HP+RGA LM+D   L PLIPYCLYHHER+DG GYPFGL G  IP EGRL+AVA
Sbjct:  194 EKTGAISISYARSSSKKDDIVISSTIVERAVENSEAIITSNALDDTRFDGAKSIILHNISSAMCAPLMYLNEVLGAIYVDVRGLINVFKNEDLELLVALAGPAAIAIKNVSYVNQLDRFYRDTLVVLANAIELRDHYTAGHIWRVTNFAIEMARELGWDEERVKMVEMGGVLHDIGKISVDNAILSKSGMLTSEEYEKIKLHPERGAWLMRDSFMLKPLIPYCLYHHERYDGTGYPFGLDGAAIPAEGRLIAVA 447          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92646.21436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y5C550_9BACT3.710e-12773.23HD domain-containing protein n=1 Tax=Candidatus Hy... [more]
A0A7V2Y4U2_9BACT3.550e-12471.65FHA domain-containing protein n=1 Tax=Candidatus H... [more]
A0A7C3AQB0_9BACT7.250e-12473.39HD domain-containing protein n=1 Tax=Candidatus Hy... [more]
A0A831USS7_9BACT1.550e-12370.47HD domain-containing protein n=1 Tax=Candidatus Hy... [more]
A0A1V5ZI47_9BACT3.310e-11062.60Cyclic di-GMP phosphodiesterase response regulator... [more]
A0A7V2TRP3_9BACT6.010e-10864.80HD domain-containing protein n=1 Tax=Candidatus Hy... [more]
A0A7C3X2X8_9BACT7.920e-10866.24HD domain-containing protein n=1 Tax=Candidatus Hy... [more]
A0A2A5D032_9BACT7.070e-10563.98Uncharacterized protein n=1 Tax=Candidatus Hydroge... [more]
A0A1V5YZT3_9BACT1.630e-10462.40Cyclic di-GMP phosphodiesterase response regulator... [more]
A0A445N2J1_9DELT3.570e-10462.20Putative HD-GYP domain protein n=1 Tax=uncultured ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92646contigM-pyrifera_M_contig92646:1..762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score194.5
Seed ortholog evalue6e-47
Seed eggNOG ortholog1379698.RBG1_1C00001G1089
Hectar predicted targeting categoryother localisation
EggNOG free text desc.metal-dependent phosphohydrolase HD region
EggNOG OGs2NP8B@2323,COG3437@1,COG3437@2
COG Functional cat.T
Best tax levelunclassified Bacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816839.821414-CDS-M-pyrifera_M_contig92646:0..7621622816839.821414-CDS-M-pyrifera_M_contig92646:0..762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92646 1..762 -
1692278209.1222382-CDS-M-pyrifera_M_contig92646:0..7621692278209.1222382-CDS-M-pyrifera_M_contig92646:0..762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92646 1..762 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92646.21436.1prot_M-pyrifera_M_contig92646.21436.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92646 1..762 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92646.21436.1

>prot_M-pyrifera_M_contig92646.21436.1 ID=prot_M-pyrifera_M_contig92646.21436.1|Name=mRNA_M-pyrifera_M_contig92646.21436.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
EKSVDLVVEHQLSKSPGSEVQISSSIVSRALDNGEAVITYNAAQDQRFEA
GASIIAQNISSAMCAPLRHQDETLGVVYVDTRGTANAFTQSDLELLVAVS
GPAAIAIRNAQYVQKIQKAYQDTLVALANAVELRDHYTVGHTWRVTNFAL
EMAKELGWPPEKLEEVEMGGVLHDVGKISIDDAILRKPGGLTDDEYEIMK
VHPQRGARLMQDIEALVPLIPYCLYHHERFDGKGYPFGLAGEDIPIEGRL
LAVA
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mRNA from alignment at M-pyrifera_M_contig92646:1..762-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92646.21436.1 ID=mRNA_M-pyrifera_M_contig92646.21436.1|Name=mRNA_M-pyrifera_M_contig92646.21436.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig92646:1..762- (Macrocystis pyrifera P11B4 male)
GAGAAGTCCGTCGACCTCGTTGTTGAACACCAGCTTTCGAAGTCGCCCGG CTCGGAAGTGCAAATCAGTTCATCGATCGTTTCCCGCGCGTTGGACAATG GCGAGGCCGTCATCACGTATAACGCGGCGCAGGATCAACGCTTTGAAGCG GGCGCGAGCATCATCGCCCAGAACATTTCGTCGGCAATGTGCGCTCCACT TCGCCACCAAGATGAAACGCTCGGCGTTGTGTATGTTGATACGCGCGGTA CAGCCAACGCGTTTACGCAGAGCGATCTCGAATTGCTTGTCGCAGTAAGT GGTCCCGCGGCGATTGCGATTCGAAATGCGCAGTATGTTCAAAAAATCCA GAAAGCGTATCAGGACACGTTGGTTGCCCTGGCGAATGCAGTGGAACTGC GCGATCACTACACCGTTGGCCATACGTGGCGCGTTACGAATTTCGCGCTT GAGATGGCCAAGGAATTGGGGTGGCCGCCAGAAAAGTTGGAAGAAGTCGA AATGGGCGGCGTACTACACGACGTCGGCAAAATCTCCATCGACGACGCTA TCCTCCGCAAACCGGGCGGTCTGACCGACGACGAATACGAGATCATGAAA GTCCATCCGCAGCGTGGGGCGCGCCTGATGCAAGACATTGAAGCCCTTGT GCCGCTCATCCCGTATTGCCTATACCACCACGAACGATTCGATGGTAAAG GCTATCCGTTTGGTCTGGCAGGCGAAGATATTCCCATAGAAGGTCGTCTA TTGGCCGTCGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92646:1..762-

>mRNA_M-pyrifera_M_contig92646.21436.1 ID=mRNA_M-pyrifera_M_contig92646.21436.1|Name=mRNA_M-pyrifera_M_contig92646.21436.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig92646:1..762- (Macrocystis pyrifera P11B4 male)
GAGAAGTCCGTCGACCTCGTTGTTGAACACCAGCTTTCGAAGTCGCCCGG
CTCGGAAGTGCAAATCAGTTCATCGATCGTTTCCCGCGCGTTGGACAATG
GCGAGGCCGTCATCACGTATAACGCGGCGCAGGATCAACGCTTTGAAGCG
GGCGCGAGCATCATCGCCCAGAACATTTCGTCGGCAATGTGCGCTCCACT
TCGCCACCAAGATGAAACGCTCGGCGTTGTGTATGTTGATACGCGCGGTA
CAGCCAACGCGTTTACGCAGAGCGATCTCGAATTGCTTGTCGCAGTAAGT
GGTCCCGCGGCGATTGCGATTCGAAATGCGCAGTATGTTCAAAAAATCCA
GAAAGCGTATCAGGACACGTTGGTTGCCCTGGCGAATGCAGTGGAACTGC
GCGATCACTACACCGTTGGCCATACGTGGCGCGTTACGAATTTCGCGCTT
GAGATGGCCAAGGAATTGGGGTGGCCGCCAGAAAAGTTGGAAGAAGTCGA
AATGGGCGGCGTACTACACGACGTCGGCAAAATCTCCATCGACGACGCTA
TCCTCCGCAAACCGGGCGGTCTGACCGACGACGAATACGAGATCATGAAA
GTCCATCCGCAGCGTGGGGCGCGCCTGATGCAAGACATTGAAGCCCTTGT
GCCGCTCATCCCGTATTGCCTATACCACCACGAACGATTCGATGGTAAAG
GCTATCCGTTTGGTCTGGCAGGCGAAGATATTCCCATAGAAGGTCGTCTA
TTGGCCGTCGCGGAGAAGTCCGTCGACCTCGTTGTTGAACACCAGCTTTC
GAAGTCGCCCGGCTCGGAAGTGCAAATCAGTTCATCGATCGTTTCCCGCG
CGTTGGACAATGGCGAGGCCGTCATCACGTATAACGCGGCGCAGGATCAA
CGCTTTGAAGCGGGCGCGAGCATCATCGCCCAGAACATTTCGTCGGCAAT
GTGCGCTCCACTTCGCCACCAAGATGAAACGCTCGGCGTTGTGTATGTTG
ATACGCGCGGTACAGCCAACGCGTTTACGCAGAGCGATCTCGAATTGCTT
GTCGCAGTAAGTGGTCCCGCGGCGATTGCGATTCGAAATGCGCAGTATGT
TCAAAAAATCCAGAAAGCGTATCAGGACACGTTGGTTGCCCTGGCGAATG
CAGTGGAACTGCGCGATCACTACACCGTTGGCCATACGTGGCGCGTTACG
AATTTCGCGCTTGAGATGGCCAAGGAATTGGGGTGGCCGCCAGAAAAGTT
GGAAGAAGTCGAAATGGGCGGCGTACTACACGACGTCGGCAAAATCTCCA
TCGACGACGCTATCCTCCGCAAACCGGGCGGTCTGACCGACGACGAATAC
GAGATCATGAAAGTCCATCCGCAGCGTGGGGCGCGCCTGATGCAAGACAT
TGAAGCCCTTGTGCCGCTCATCCCGTATTGCCTATACCACCACGAACGAT
TCGATGGTAAAGGCTATCCGTTTGGTCTGGCAGGCGAAGATATTCCCATA
GAAGGTCGTCTATTGGCCGTCGCG
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