mRNA_M-pyrifera_M_contig9264.21435.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: D8LE94_ECTSI (Complex1_LYR_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE94_ECTSI) HSP 1 Score: 184 bits (468), Expect = 4.440e-54 Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 2 Query: 17 MNPAQAVERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAVKTHALSDLRQHGQ 319 MNPAQAVERS++RLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKN+GETDP KIE LKG AIRGLSNYLVHESGSNDPQLKKRM+AVKTHAL+DL+Q Q Sbjct: 1 MNPAQAVERSSTRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRMEAVKTHALADLKQRQQ 101
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: A0A835Z7F8_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F8_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.490e-23 Identity = 47/106 (44.34%), Postives = 73/106 (68.87%), Query Frame = 2 Query: 17 MNPAQA-VERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAVKTHALSDLRQHGQGGTP 331 MNPA + V+R++ +LYRDCLRL +H+ +S KG +R ++ TEF+K++ ETDPA++ LK A+RGLSNY +HES S D +LK RM+ + +++ + + P Sbjct: 1 MNPAASGVQRTSRQLYRDCLRLANHVGGRSAKGDAMRKMISTEFRKHIDETDPARVAILKAAAVRGLSNYFLHESASRDAKLKARMEDQRIAVQAEIGEEQRARKP 106
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: W7T1T1_9STRA (Complex1_LYR_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T1T1_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.640e-22 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 41 RSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAVKTHALSDLRQHGQ 319 +S+ +LYRDCLR+ DHIASKSPKG LR +LR+EFKKN D ++EQLK NA RGL+NYL++ESGS +P+++ RM+ + + + + Sbjct: 17 KSSVQLYRDCLRVADHIASKSPKGIALRKMLRSEFKKNAAVDDAKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTSDMIKQCMNNAK 109
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: A0A482SGE8_9ARCH (LYR motif-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGE8_9ARCH) HSP 1 Score: 101 bits (252), Expect = 3.710e-22 Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 2 Query: 20 NPAQAVERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAVKTHALSDLRQ 310 N +A RS +LYRDCLRLV HIA +S KG+ +R +LR EF+KN DPAKIEQLK NA+RGL+NYL+ ES + D +L+K+ + + D + Sbjct: 24 NGFKAFARSTPQLYRDCLRLVKHIAGRSQKGENIRRVLRHEFRKNAKLEDPAKIEQLKSNAVRGLANYLMIESATKDTKLQKQANIFAEKEIKDANE 120
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: A0A2D4CFG3_PYTIN (Complex1_LYR_dom domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFG3_PYTIN) HSP 1 Score: 94.0 bits (232), Expect = 8.620e-20 Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 17 MNPAQAVERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAVKT 286 M+ + RS+ +LYRDC+RL HI S KGQ ++ ++R EF+K ETDP KIE LK NA+RGLSNYLV + S D L++ M A T Sbjct: 1 MSTPTQITRSSIQLYRDCMRLAKHIGGNSKKGQAIKSLIRREFEKGRSETDPEKIEALKANAVRGLSNYLVMANSSKDKNLQQAMKATPT 90
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: W4GBX7_9STRA (Complex1_LYR_dom domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4GBX7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 8.860e-20 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 17 MNPAQAVERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAVKTHALSD 301 M+ V R++ +LYRDCLRL +HI K+ KG+ +R +LR EF+K++ ETD KIE LK NA+RGLSNYLV + S D +LK+ + + D Sbjct: 1 MSGIPQVSRTSLQLYRDCLRLANHIGGKTKKGEAIRSMLRAEFRKSIHETDEVKIENLKANAVRGLSNYLVLANSSKDGKLKQAIRTTDESSAKD 95
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: A0A7S1ZML8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZML8_TRICV) HSP 1 Score: 94.4 bits (233), Expect = 1.940e-19 Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 2 Query: 8 LVTMNPAQAVERSASRLYRDCLRLVDHIA-SKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAVKTHALSDLRQHG 316 +V NP V+R++ +LYRDCLRL+ HIA SPK LR ++++EF KN E DPAKIE +K AIR LSNY+++ESG+ D +L K M+ +S + + G Sbjct: 26 MVGPNP---VQRTSLQLYRDCLRLIRHIAPGHSPKAMALRAMVQSEFSKNRDEKDPAKIESMKAGAIRALSNYMLYESGAKDQKLGKAMNKFNQDTISGIDRSG 126
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: A0A5D6XV63_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV63_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 8.160e-19 Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 26 AQAVERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRM 271 A V R++ +LYRDC+RL HI KS KG+ +R ++R EF+K E DP KIE LK NAIRGLSNYLV + S D QL+ M Sbjct: 2 ATKVSRTSLQLYRDCMRLAKHIGGKSKKGEAIRSLIRREFEKGRAEVDPEKIEALKTNAIRGLSNYLVLANSSKDKQLQSAM 83
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: A0A067CDF1_SAPPC (Complex1_LYR_dom domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CDF1_SAPPC) HSP 1 Score: 90.9 bits (224), Expect = 1.130e-18 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 35 VERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMDAV 280 V RS+ +LYRDCLRL HI S KG+ +R +LR EF+K++ ETD KIE LK NA+RGLSNYLV + S D +LK+ + + Sbjct: 6 VSRSSLQLYRDCLRLAKHIGGNSRKGEAIRSMLRAEFRKSMHETDELKIENLKANAVRGLSNYLVLANSSKDGKLKQAIKST 87
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Match: D0NYH0_PHYIT (Complex1_LYR_dom domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=D0NYH0_PHYIT) HSP 1 Score: 90.1 bits (222), Expect = 2.200e-18 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 17 MNPAQAVERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETDPAKIEQLKGNAIRGLSNYLVHESGSNDPQLKKRMD 274 M+ V R+ +LYRDCLRL HI S KGQ +R ++R EF K ETDP KIE LK NA+RGLSNYL+ + S D +L++ M+ Sbjct: 1 MSATNQVTRTTIQLYRDCLRLAKHIGGNSKKGQAIRELVRREFDKGRSETDPEKIEALKANAVRGLSNYLMLANSSKDQRLQEAMN 86 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9264.21435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9264.21435.1 >prot_M-pyrifera_M_contig9264.21435.1 ID=prot_M-pyrifera_M_contig9264.21435.1|Name=mRNA_M-pyrifera_M_contig9264.21435.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp MNPAQAVERSASRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNVGETback to top mRNA from alignment at M-pyrifera_M_contig9264:5646..9787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9264.21435.1 ID=mRNA_M-pyrifera_M_contig9264.21435.1|Name=mRNA_M-pyrifera_M_contig9264.21435.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4142bp|location=Sequence derived from alignment at M-pyrifera_M_contig9264:5646..9787- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9264:5646..9787- >mRNA_M-pyrifera_M_contig9264.21435.1 ID=mRNA_M-pyrifera_M_contig9264.21435.1|Name=mRNA_M-pyrifera_M_contig9264.21435.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig9264:5646..9787- (Macrocystis pyrifera P11B4 male)back to top |