mRNA_M-pyrifera_M_contig92632.21429.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92632.21429.1
Unique NamemRNA_M-pyrifera_M_contig92632.21429.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: A0A7C5KSE1_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5KSE1_9GAMM)

HSP 1 Score: 382 bits (982), Expect = 3.780e-128
Identity = 190/257 (73.93%), Postives = 215/257 (83.66%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSL--------------IPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V IRRRNVLTTTLD Q++ +  LP +GY V+LANPPFSGR+DKDRIVDDVKVG TTA+EILFLKYMMDSL                 GRCGVIVPEGVLFGSTGAHKELRRQLLENN VEAV+SLPGGVFQPYSGVKTSVL+FRKGGTTE+VMFLHADNDGYKLDARH +PIE+DDLP LVAA++ +    E+W +R+E QEWT  WWFA  DEIRA++YNLSA RYRPL++ Q+E+R+PRELLDELAAI
Sbjct:  279 TLRGLPNVHIRRRNVLTTTLDTQQKAELGLPQEGYHVILANPPFSGRIDKDRIVDDVKVGATTATEILFLKYMMDSLKSPSPLRGEGRGEGATGGRCGVIVPEGVLFGSTGAHKELRRQLLENNTVEAVLSLPGGVFQPYSGVKTSVLIFRKGGTTEQVMFLHADNDGYKLDARHDTPIEEDDLPGLVAAYKDKAANLEKWRKRNENQEWTEKWWFADIDEIRANDYNLSASRYRPLAQTQVEHRDPRELLDELAAI 535          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: UPI0019677D73 (type I restriction-modification system subunit M n=1 Tax=Methylococcus sp. EFPC2 TaxID=2812648 RepID=UPI0019677D73)

HSP 1 Score: 372 bits (955), Expect = 2.960e-124
Identity = 183/243 (75.31%), Postives = 209/243 (86.01%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V+I  RNVLTTTLD  +R + RLP +GY VVLANPPFSGR+DKDRIVDDVKVGT+TA+E+LFLKYMMDSL P GRCGVIVPEGVLFGST AHKELRRQL+ENNRVEAV+SLPGGVFQPYSGVKTSVLLFRKGG TERV+FLHADNDGYKLDA H +PI+ DDLP LVAA+R + E    W+ RD  QEW   WWFA A  +RA+++NLSAGRYRP+++  +E+R+PRELLDELAAI
Sbjct:  279 TLRGLPNVRILLRNVLTTTLDPDKRAELRLPAEGYHVVLANPPFSGRVDKDRIVDDVKVGTSTATELLFLKYMMDSLRPGGRCGVIVPEGVLFGSTTAHKELRRQLIENNRVEAVLSLPGGVFQPYSGVKTSVLLFRKGGNTERVLFLHADNDGYKLDANHDTPIDQDDLPMLVAAYRYKDERWLDWLTRDAAQEWPQKWWFADAATLRANDFNLSAGRYRPMNQTAVEHRDPRELLDELAAI 521          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: Q5NWK9_AROAE (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Aromatoleum aromaticum (strain EbN1) TaxID=76114 RepID=Q5NWK9_AROAE)

HSP 1 Score: 372 bits (954), Expect = 4.070e-124
Identity = 183/243 (75.31%), Postives = 206/243 (84.77%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V I  RNVLTTTLD + + D  LP +GY VVLANPPFSGR+DKDRIVDDVK+GTTTA+E+LFLKYMMDSL P GRCGVIVPEGVLFGSTGAHKELRRQL+ENNRVEAVMSLPGGVFQPYSGVKTSVL FRKGG TE V+FLH DNDGYKLDA H +PIE DDLP LVAA+R R    E W  R+   EW+A WWFA A  +RA+++NLSAGRYRP+S+ Q+E+R+PR+LLDELAAI
Sbjct:  279 TLRGLPNVHILLRNVLTTTLDNERKADLCLPQEGYHVVLANPPFSGRVDKDRIVDDVKIGTTTATELLFLKYMMDSLRPGGRCGVIVPEGVLFGSTGAHKELRRQLIENNRVEAVMSLPGGVFQPYSGVKTSVLFFRKGGRTENVLFLHVDNDGYKLDANHDTPIEADDLPGLVAAYRDREANREAWASREPQAEWSAPWWFADAAALRANDFNLSAGRYRPMSQSQVEHRDPRKLLDELAAI 521          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: A0A177MD63_METMH (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Methylomonas methanica TaxID=421 RepID=A0A177MD63_METMH)

HSP 1 Score: 372 bits (954), Expect = 4.200e-124
Identity = 180/243 (74.07%), Postives = 211/243 (86.83%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V+I  RNVLTTTLDA +RE++ LP DGY VVLANPPFSGR+DKDRIV+DVKVGT+T++E+LFLKYMMDSL P GRCGVIVPEGVLFGST AHKELRRQL+ENNRVEAV+SLPGGVFQPYSGVKTSVL+F++GG+TE+V+FLHADNDGYKLDA H +PIE DDLPDLVAA+R   +  + W  RDE   WT  WWFA A  +RA+++NLSAGRYRP+++  +E+RNPRELL ELAAI
Sbjct:  279 TLRGLPNVRILLRNVLTTTLDADKREEYSLPADGYHVVLANPPFSGRVDKDRIVEDVKVGTSTSTELLFLKYMMDSLRPGGRCGVIVPEGVLFGSTTAHKELRRQLIENNRVEAVLSLPGGVFQPYSGVKTSVLIFKRGGSTEQVLFLHADNDGYKLDANHDTPIEADDLPDLVAAYRNLEQHWQDWQDRDETNVWTLKWWFADAATLRANDFNLSAGRYRPMNQAAVEHRNPRELLGELAAI 521          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: A0A238DPP3_9BURK (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Thiomonas sp. X19 TaxID=1050370 RepID=A0A238DPP3_9BURK)

HSP 1 Score: 365 bits (936), Expect = 3.440e-121
Identity = 179/243 (73.66%), Postives = 205/243 (84.36%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V+I+ RNVLTTT DA+ + +  LP DG+ V+LANPPFSGR+D+DRIV+DVKVGTTTA+E+LFLKYMMDSL P GRCGVIVPEGVLFGSTGAHKELRRQL+ENNRVEAV+SLPGGVFQPYSGVKTSVL FRKGG TERVMFLHADNDGYKLDA H +PIE DDLP L  A+  R     +W  RD   EW   WWFA A  +RAS++NLSAGRYRP+S+ Q+E+R+PRELLDELA+I
Sbjct:  294 TLRGLPDVRIQLRNVLTTTQDAERKAELGLPADGFHVILANPPFSGRVDRDRIVEDVKVGTTTATELLFLKYMMDSLRPGGRCGVIVPEGVLFGSTGAHKELRRQLIENNRVEAVLSLPGGVFQPYSGVKTSVLFFRKGGRTERVMFLHADNDGYKLDANHDTPIEADDLPALAQAYVLRESAWAKWAARDAAAEWGEKWWFADAATLRASDFNLSAGRYRPMSQAQVEHRDPRELLDELASI 536          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: A0A560VQY0_9BURK (Site-specific DNA-methyltransferase (adenine-specific) n=3 Tax=Burkholderia TaxID=32008 RepID=A0A560VQY0_9BURK)

HSP 1 Score: 363 bits (932), Expect = 8.820e-121
Identity = 176/243 (72.43%), Postives = 205/243 (84.36%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V+I +RNVLTTTLDA+ + +  LP  GY VVLANPPFSGR+DKDRIVDDVK+GTTTA+E+LFLKYM+DSL P GRCGV+VPEGVLFGSTGAHKELRRQL+ENNRVEAVMSLPGGVFQPYSGVKTSVL FRKGG TE V+FLHA+NDGYKLDA H   IEDDDLP L+AA+R R +    W  RD   +W+A WWFA  D +RA+++NL+AG YRP+S+ Q+E++NP ELL ELAAI
Sbjct:  279 TLRGLPNVRILQRNVLTTTLDAESKAELGLPESGYHVVLANPPFSGRVDKDRIVDDVKIGTTTATELLFLKYMVDSLRPGGRCGVVVPEGVLFGSTGAHKELRRQLIENNRVEAVMSLPGGVFQPYSGVKTSVLFFRKGGKTENVLFLHAENDGYKLDANHDVAIEDDDLPMLIAAYRDREQNLRTWGARDAAAQWSAQWWFADIDTLRANDFNLAAGHYRPMSQEQIEHQNPGELLGELAAI 521          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: A0A8J7M744_9RHOB (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Thermohalobaculum xanthum TaxID=2753746 RepID=A0A8J7M744_9RHOB)

HSP 1 Score: 361 bits (926), Expect = 7.320e-120
Identity = 175/242 (72.31%), Postives = 205/242 (84.71%), Query Frame = 1
Query:    4 LRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            LRGL RV+I RR+ LT TLD Q++ +  LPP+G+ VVLANPPFSGRLDKDRIVDDVKVGTTT +E+LFL+YM++ L P GRCGV+VPEGVLFGSTGAHKELRR+L+ENN VEAV+SLPGGVFQPYSGVKTS+L+FRKGG T RVMFLHADNDGYKLDA H  PIE DDLP LVAAF  R EL E W  RD+  EWT  WWFA A+ IRA+++NLSAGR+RP SR Q+++R+P+E+LDEL AI
Sbjct:  281 LRGLDRVRILRRDALTRTLDRQQKIEMGLPPEGFDVVLANPPFSGRLDKDRIVDDVKVGTTTQTELLFLQYMLNQLKPGGRCGVVVPEGVLFGSTGAHKELRRKLIENNTVEAVLSLPGGVFQPYSGVKTSILVFRKGGETGRVMFLHADNDGYKLDANHDQPIEADDLPGLVAAFNSREELWEDWQARDQEAEWTENWWFADAETIRAADFNLSAGRHRPQSRAQVQHRDPQEILDELRAI 522          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: UPI001640EC1B (N-6 DNA methylase n=9 Tax=Burkholderia TaxID=32008 RepID=UPI001640EC1B)

HSP 1 Score: 360 bits (924), Expect = 1.420e-119
Identity = 178/243 (73.25%), Postives = 199/243 (81.89%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V I  RNVLTTTLD++ RE+  LP  GY VVLANPPFSGR+D DRIVDDVKVGTTTA+E+LFLKYMMDSL P GRCGVIVPEGVLFGSTGAHKELRRQL+ENNRVE VMSLPGGVFQPYSGVKTSVL FRKGGTTE V+FLHADNDGY+LDA H   IE DDLP L+ A+  R      W  RD   +W+  WWFA    IRA+++NLSAGRYRP+S+ Q+E+RNPRELL ELAA+
Sbjct:  279 TLRGLPNVHILLRNVLTTTLDSERREELSLPERGYHVVLANPPFSGRVDTDRIVDDVKVGTTTATELLFLKYMMDSLRPGGRCGVIVPEGVLFGSTGAHKELRRQLIENNRVEGVMSLPGGVFQPYSGVKTSVLFFRKGGTTENVLFLHADNDGYRLDANHDVAIEADDLPSLIHAYTDRQTRLVAWDSRDAAAQWSEKWWFADVTTIRANDFNLSAGRYRPMSQEQVEHRNPRELLGELAAL 521          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: V7EM18_9RHOB (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Rhodobacter sp. CACIA14H1 TaxID=1408890 RepID=V7EM18_9RHOB)

HSP 1 Score: 358 bits (920), Expect = 5.230e-119
Identity = 171/243 (70.37%), Postives = 206/243 (84.77%), Query Frame = 1
Query:    1 TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            TLRGLP V+I +RN LTT +D  E+ +  LP DGY VVLANPPFSG+LD+DRIVDDVK+GTTTA+E+LFLKYM++ +   GRCGV+VPEGVLFGSTGAHKELRRQL+ENN VEAV+SLPGGVFQPYSGVKTSV++FRKGG T++V FLHADNDGYK+DA+H +PIE DDLP LV AF+ R +L  +W QR+   EWT  +WFASADE+R +++NLSAGRYRP+S+ Q E+RNP ELLDEL AI
Sbjct:  279 TLRGLPNVRILKRNALTTVMDRSEKAELGLPIDGYDVVLANPPFSGKLDRDRIVDDVKIGTTTATELLFLKYMLNLMKAGGRCGVVVPEGVLFGSTGAHKELRRQLVENNTVEAVLSLPGGVFQPYSGVKTSVIVFRKGGRTQQVQFLHADNDGYKMDAQHDTPIEADDLPALVQAFKDRAQLLPQWQQRETAAEWTEKYWFASADELRENDFNLSAGRYRPMSKAQAEHRNPIELLDELRAI 521          
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Match: A0A8D4VXI4_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Methylomagnum ishizawai TaxID=1760988 RepID=A0A8D4VXI4_9GAMM)

HSP 1 Score: 358 bits (919), Expect = 8.090e-119
Identity = 176/242 (72.73%), Postives = 205/242 (84.71%), Query Frame = 1
Query:    4 LRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDKDRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHKELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHADNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALWWFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI 729
            LRGLP V+I++RNVLTTTLD +++ +  LP +GY V+LANPPFSGR+DKDRIV++VKVG TTA+EILFLKYMMDSL P GRCGVIVPEGVLFGSTGAHKELRRQLLEN RV+AV+SLPGGVFQPYSGVKTSVLLF K G+TERV+FLHAD DGYKLDA H + +E DDLP LV AF+ R E    W  RD   EW   WWFA+A+EIR +++NLSAGRYRP+S+ Q+E+RNP ELLDELAAI
Sbjct:  280 LRGLPEVRIQKRNVLTTTLDNEQKRERGLPVEGYHVILANPPFSGRVDKDRIVEEVKVGGTTATEILFLKYMMDSLRPGGRCGVIVPEGVLFGSTGAHKELRRQLLENFRVDAVLSLPGGVFQPYSGVKTSVLLFSKQGSTERVLFLHADADGYKLDANHDAAVEADDLPGLVEAFQARAERWAAWRDRDPQAEWAEKWWFATAEEIRGNDFNLSAGRYRPMSQAQVEHRNPLELLDELAAI 521          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92632.21429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C5KSE1_9GAMM3.780e-12873.93Site-specific DNA-methyltransferase (adenine-speci... [more]
UPI0019677D732.960e-12475.31type I restriction-modification system subunit M n... [more]
Q5NWK9_AROAE4.070e-12475.31Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A177MD63_METMH4.200e-12474.07Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A238DPP3_9BURK3.440e-12173.66Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A560VQY0_9BURK8.820e-12172.43Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A8J7M744_9RHOB7.320e-12072.31Site-specific DNA-methyltransferase (adenine-speci... [more]
UPI001640EC1B1.420e-11973.25N-6 DNA methylase n=9 Tax=Burkholderia TaxID=32008... [more]
V7EM18_9RHOB5.230e-11970.37Site-specific DNA-methyltransferase (adenine-speci... [more]
A0A8D4VXI4_9GAMM8.090e-11972.73Site-specific DNA-methyltransferase (adenine-speci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92632contigM-pyrifera_M_contig92632:31..762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score372.5
Seed ortholog evalue1.5e-100
Seed eggNOG ortholog76114.p2A48
Preferred namehsdM
KEGG koko:K03427
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.N-6 DNA Methylase
EggNOG OGs1MW3A@1224,2KWA9@206389,2VIP4@28216,COG0286@1,COG0286@2
EC2.1.1.72
COG Functional cat.L
Best tax levelRhodocyclales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko02048
Exons1
Model size732
Cds size732
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816839.4354372-CDS-M-pyrifera_M_contig92632:30..7621622816839.4354372-CDS-M-pyrifera_M_contig92632:30..762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92632 31..762 -
1692278208.9064715-CDS-M-pyrifera_M_contig92632:30..7621692278208.9064715-CDS-M-pyrifera_M_contig92632:30..762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92632 31..762 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92632.21429.1prot_M-pyrifera_M_contig92632.21429.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92632 31..762 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92632.21429.1

>prot_M-pyrifera_M_contig92632.21429.1 ID=prot_M-pyrifera_M_contig92632.21429.1|Name=mRNA_M-pyrifera_M_contig92632.21429.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
TLRGLPRVQIRRRNVLTTTLDAQEREDFRLPPDGYAVVLANPPFSGRLDK
DRIVDDVKVGTTTASEILFLKYMMDSLIPNGRCGVIVPEGVLFGSTGAHK
ELRRQLLENNRVEAVMSLPGGVFQPYSGVKTSVLLFRKGGTTERVMFLHA
DNDGYKLDARHYSPIEDDDLPDLVAAFRGRTELTERWMQRDEGQEWTALW
WFASADEIRASEYNLSAGRYRPLSRLQMEYRNPRELLDELAAI*
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mRNA from alignment at M-pyrifera_M_contig92632:31..762-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92632.21429.1 ID=mRNA_M-pyrifera_M_contig92632.21429.1|Name=mRNA_M-pyrifera_M_contig92632.21429.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig92632:31..762- (Macrocystis pyrifera P11B4 male)
ACGCTTCGTGGGCTTCCGCGCGTGCAGATTCGCCGCCGCAACGTTCTCAC GACGACGTTGGACGCCCAGGAGAGAGAAGACTTCCGCCTACCGCCGGATG GCTACGCGGTGGTGCTGGCCAACCCGCCATTCTCCGGCCGGCTCGACAAG GATCGTATTGTTGACGATGTGAAGGTCGGGACCACCACTGCCAGCGAGAT CTTGTTTCTAAAGTACATGATGGACAGCTTGATACCCAACGGTCGCTGCG GGGTGATCGTGCCGGAGGGCGTTCTGTTCGGCTCTACCGGCGCGCACAAA GAGCTGCGCCGTCAGTTGCTGGAGAACAACAGGGTCGAGGCCGTGATGTC ATTGCCCGGCGGGGTATTTCAGCCGTACTCGGGCGTGAAGACTTCGGTGC TGTTGTTCCGGAAGGGCGGTACGACCGAACGGGTTATGTTCCTGCACGCT GACAATGACGGGTACAAGCTTGATGCTCGGCACTATTCACCGATTGAGGA TGATGATCTGCCTGATCTGGTTGCCGCCTTTCGGGGCCGCACTGAGCTGA CGGAACGATGGATGCAACGCGATGAGGGGCAGGAGTGGACCGCGCTATGG TGGTTCGCATCAGCAGACGAGATCAGAGCGAGCGAGTACAACCTGTCTGC TGGACGTTACCGGCCGCTATCGCGATTGCAAATGGAATACCGTAACCCTC GAGAGCTGCTGGACGAATTAGCGGCTATTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92632:31..762-

>mRNA_M-pyrifera_M_contig92632.21429.1 ID=mRNA_M-pyrifera_M_contig92632.21429.1|Name=mRNA_M-pyrifera_M_contig92632.21429.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig92632:31..762- (Macrocystis pyrifera P11B4 male)
ACGCTTCGTGGGCTTCCGCGCGTGCAGATTCGCCGCCGCAACGTTCTCAC
GACGACGTTGGACGCCCAGGAGAGAGAAGACTTCCGCCTACCGCCGGATG
GCTACGCGGTGGTGCTGGCCAACCCGCCATTCTCCGGCCGGCTCGACAAG
GATCGTATTGTTGACGATGTGAAGGTCGGGACCACCACTGCCAGCGAGAT
CTTGTTTCTAAAGTACATGATGGACAGCTTGATACCCAACGGTCGCTGCG
GGGTGATCGTGCCGGAGGGCGTTCTGTTCGGCTCTACCGGCGCGCACAAA
GAGCTGCGCCGTCAGTTGCTGGAGAACAACAGGGTCGAGGCCGTGATGTC
ATTGCCCGGCGGGGTATTTCAGCCGTACTCGGGCGTGAAGACTTCGGTGC
TGTTGTTCCGGAAGGGCGGTACGACCGAACGGGTTATGTTCCTGCACGCT
GACAATGACGGGTACAAGCTTGATGCTCGGCACTATTCACCGATTGAGGA
TGATGATCTGCCTGATCTGGTTGCCGCCTTTCGGGGCCGCACTGAGCTGA
CGGAACGATGGATGCAACGCGATGAGGGGCAGGAGTGGACCGCGCTATGG
TGGTTCGCATCAGCAGACGAGATCAGAGCGAGCGAGTACAACCTGTCTGC
TGGACGTTACCGGCCGCTATCGCGATTGCAAATGGAATACCGTAACCCTC
GAGAGCTGCTGGACGAATTAGCGGCTATTTAAACGCTTCGTGGGCTTCCG
CGCGTGCAGATTCGCCGCCGCAACGTTCTCACGACGACGTTGGACGCCCA
GGAGAGAGAAGACTTCCGCCTACCGCCGGATGGCTACGCGGTGGTGCTGG
CCAACCCGCCATTCTCCGGCCGGCTCGACAAGGATCGTATTGTTGACGAT
GTGAAGGTCGGGACCACCACTGCCAGCGAGATCTTGTTTCTAAAGTACAT
GATGGACAGCTTGATACCCAACGGTCGCTGCGGGGTGATCGTGCCGGAGG
GCGTTCTGTTCGGCTCTACCGGCGCGCACAAAGAGCTGCGCCGTCAGTTG
CTGGAGAACAACAGGGTCGAGGCCGTGATGTCATTGCCCGGCGGGGTATT
TCAGCCGTACTCGGGCGTGAAGACTTCGGTGCTGTTGTTCCGGAAGGGCG
GTACGACCGAACGGGTTATGTTCCTGCACGCTGACAATGACGGGTACAAG
CTTGATGCTCGGCACTATTCACCGATTGAGGATGATGATCTGCCTGATCT
GGTTGCCGCCTTTCGGGGCCGCACTGAGCTGACGGAACGATGGATGCAAC
GCGATGAGGGGCAGGAGTGGACCGCGCTATGGTGGTTCGCATCAGCAGAC
GAGATCAGAGCGAGCGAGTACAACCTGTCTGCTGGACGTTACCGGCCGCT
ATCGCGATTGCAAATGGAATACCGTAACCCTCGAGAGCTGCTGGACGAAT
TAGCGGCTATTTAA
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