mRNA_M-pyrifera_M_contig9256.21410.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE) HSP 1 Score: 297 bits (760), Expect = 1.060e-98 Identity = 141/216 (65.28%), Postives = 168/216 (77.78%), Query Frame = 1 Query: 28 RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAED-GCDVVMPEPLAGASGDGYRVRISEVGTENSRCSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEI 672 RPY V W GA D +EVDLHYCGSYSFCF EDCGF+IA++ E +DAC +D V PEP+AG S +GYRVRISEVGT+N RCS +FYLVASAD GE GGP++ V+ P AN++AVAGE YTVEFDYDNGFG++ GRF IDLY A +G GDCG+W +VCDKP GCRDS+GDY+VV+P+D+ GMYKIRVGLFGD S++ACS SFEI Sbjct: 40 RPYVVSWQGAQADDRFEVDLHYCGSYSFCFGEAEDCGFWIANVCNEADDACMIQDDQSSQVTFPEPVAGHSNNGYRVRISEVGTDNFRCSEDFYLVASADVLEFGEPGGPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKA-EGNGDCGSWVTSVCDKPDMGCRDSEGDYDVVIPADSEEGMYKIRVGLFGDDSIYACSPSFEI 254
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: D8LEQ9_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEQ9_ECTSI) HSP 1 Score: 283 bits (723), Expect = 6.540e-93 Identity = 130/220 (59.09%), Postives = 167/220 (75.91%), Query Frame = 1 Query: 28 RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADL--SGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEVGTENSRCSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMA--GDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEIM 675 RPY V W GA D +E+DLHYCGSYS+CF+ + +CGF++A++ G+G A+ V PEPL G S +GYR+RI+EVG++ RCS +FYL++SADAP GE GGP+I V+ P A+++A+AGE YTVEFDYDNGFG++ GRF IDLY A DG GDCGTW +VCDKP GC DSQGDYNVV+P+D+ GMYKIRVGLFGD +++ACS SFE++ Sbjct: 41 RPYIVSWNGASADDRFEIDLHYCGSYSYCFE-EAECGFWLANVCAEGDGSGCMSQADQSSQVTFPEPLGGRSNEGYRIRIAEVGSDTYRCSDDFYLMSSADAPAVGEDGGPTIEVVAPTADALAIAGEIYTVEFDYDNGFGEQLGRFKIDLYKALGEDGAGDCGTWVTSVCDKPDVGCLDSQGDYNVVIPTDSEDGMYKIRVGLFGDDTIYACSPSFEVV 259
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: D7FN59_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN59_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.350e-90 Identity = 128/217 (58.99%), Postives = 163/217 (75.12%), Query Frame = 1 Query: 31 PYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAED-GCDVVMPEPLAGASGDGYRVRISEVGTENSRCSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEIMP 678 PY V W GA PD +E+DLHYCGSYSFCF+ ++CGF++ +L EG+DAC +D V +PEP+ G S GYRVRI +VGTE RCS EFYL++SADA + GP++ V+ P++ ++AVAG YTVEFDYDNGFG + GRF IDLY A +G GDCG W ++VCDKP GC D++GDY++V+P D+ GMYKIRVGLFGD SVFACS SFE++P Sbjct: 41 PYIVSWKGASPDDRFEIDLHYCGSYSFCFEEADECGFWVTNLCAEGDDACMNQDDLMSQVTLPEPVDGHSNSGYRVRIGKVGTETFRCSDEFYLMSSADAS---DQDGPTMEVVAPSSGALAVAGAVYTVEFDYDNGFGAQQGRFKIDLYHA-EGTGDCGDWVSSVCDKPDVGCHDTEGDYDIVIPRDSEGGMYKIRVGLFGDDSVFACSASFEVVP 253
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 244 bits (623), Expect = 6.480e-78 Identity = 119/217 (54.84%), Postives = 150/217 (69.12%), Query Frame = 1 Query: 28 RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEVGTENSR-CSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEIM 675 R YTVEWTG ++ YE+DL+YCGS C + ++CG ++ L GED CP E D+VMPEP++G SG GY+VR+++V ++S CS EFYL+A A+AP G+ GGP + V P++ A AGE YTVEFDYDNG G GRF IDLY A G GDCGT+ +CDKPT GC+DS GDY+V +P D AGMY IRVG F D SV+ CSD FEI+ Sbjct: 23 RAYTVEWTGTGSNNRYEIDLYYCGS--MCME--DECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSA-TGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 239 bits (610), Expect = 3.510e-76 Identity = 117/217 (53.92%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 28 RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEVGTENSR-CSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEIM 675 R YTVEW+G + +E+DL+YC S C + ++CG ++ L GED CP E D+VMPEP++G SG GY+VR+++V E+S CS EFYL+A ADAP + GGP + V P+ A AGE YTVEFDYDNG G GRF IDLY A G GDCGT+ +CDKPT GC+DS GDY+V +P D AGMY IRVG F D SV+ CSD FEI+ Sbjct: 36 RAYTVEWSGTGSNKRFEIDLYYCNS--MCME--DECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAA-TGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL 247
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 228 bits (581), Expect = 1.150e-71 Identity = 112/216 (51.85%), Postives = 146/216 (67.59%), Query Frame = 1 Query: 28 RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEV-GTENSRCSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEI 672 R YTVEWTG D+ +E+DL+YCGS C + +DCG ++ L GED CP E D+VMPEP+ G SG GY+VR+ ++ E++ CS EFYL+AS++AP G+ GP++ V P + +A YTVEFDYDNG G RF IDLY A DG GDCGT+ ++CDKPT GC+DS GDY+V +P DT AG YKIRV F D S+++CS +F I Sbjct: 35 RTYTVEWTGTSSDNRFEIDLYYCGS--MCME--DDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRA-DGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 226 bits (575), Expect = 6.610e-71 Identity = 117/227 (51.54%), Postives = 149/227 (65.64%), Query Frame = 1 Query: 10 PTSSLI----RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEVGTENSR-CSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEIM 675 P++ LI R YTVEWTGAD +E+DL++CGS C + + CG ++ L GE+ CP E D+VMPEP++G S GY+VR+ +V E+S CS FYL+AS DAP G G + V P A AGE YTVEFDYDNG G + RF IDLYMA DG GDCGT+ ++CDKP+ GC+DS GDY+V +P+DT AG YKIRVG F D ++ CS +F IM Sbjct: 25 PSADLIVVADRTYTVEWTGAD-SGRFEIDLYHCGS--MCME--DSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMA-DGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIM 245
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.770e-70 Identity = 115/217 (53.00%), Postives = 148/217 (68.20%), Query Frame = 1 Query: 28 RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEVGTENSR-CSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEIM 675 R YTVEWTG DS +E+DL+YCGS FC + ++CG ++ L G D CP + D+VMPEP+AG S GY+V +++ E+S CS +F LVAS DAP GE+G S+ V P+ A+AG YTVE+DY+NG G T RF IDLY G G GDCGT+ A +CDKP+ GC DSQGDY+V +PSDT AGMY +RVG+F D +F CS+ FEI+ Sbjct: 35 RTYTVEWTGTS-DSRFEIDLYYCGS--FCME--DECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTS-SGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGY-SLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.230e-65 Identity = 109/216 (50.46%), Postives = 143/216 (66.20%), Query Frame = 1 Query: 28 RPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEVGTENSR-CSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEI 672 R YTVEWTG +E+DL+YC S FC D + CG ++ L G D CP + D++MPEP++G S GY+V + E+ CS +F L+AS DAP GEMG S+ V P+ A+AGE YTVE+DY+NGFG T RF +DLY+ G G GDCGT+ +CD+P+ GC DSQGDY+V +PSDT AGMY IRVG+F D ++ CSD+FE+ Sbjct: 35 RAYTVEWTGTTT-GRFEIDLYYCNS--FCMD--DVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGY-SLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVG-GTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 212 bits (539), Expect = 1.640e-65 Identity = 108/215 (50.23%), Postives = 142/215 (66.05%), Query Frame = 1 Query: 34 YTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIADLSGEGEDACPTAEDGCDVVMPEPLAGASGDGYRVRISEVGTENSR-CSSEFYLVASADAPGPGEMGGPSIVVIEPNANSIAVAGEAYTVEFDYDNGFGDRTGRFMIDLYMAGDGGGDCGTWSAAVCDKPTTGCRDSQGDYNVVVPSDTAAGMYKIRVGLFGDHSVFACSDSFEIM 675 YTVEWTGA Y++DL+YCGS +++CG ++ L G+D CP + DVVMPEP+ G S GY+V +++ E+ CS +F L+AS +AP +MG + V P+ A+AG YTVEFDYDNG G RF IDLY +G G GDCGT+ +CDKP+ GC+DSQGDY+VV+PS T +GMY IRVG+F D V+ CSDSFEI+ Sbjct: 37 YTVEWTGAT-SGRYDIDLYYCGSVCM----EDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGA-YVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSG-GSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9256.21410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9256.21410.1 >prot_M-pyrifera_M_contig9256.21410.1 ID=prot_M-pyrifera_M_contig9256.21410.1|Name=mRNA_M-pyrifera_M_contig9256.21410.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp MYLPTSSLIRPYTVEWTGADPDSLYEVDLHYCGSYSFCFDGDEDCGFYIAback to top mRNA from alignment at M-pyrifera_M_contig9256:8270..10803+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9256.21410.1 ID=mRNA_M-pyrifera_M_contig9256.21410.1|Name=mRNA_M-pyrifera_M_contig9256.21410.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2534bp|location=Sequence derived from alignment at M-pyrifera_M_contig9256:8270..10803+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9256:8270..10803+ >mRNA_M-pyrifera_M_contig9256.21410.1 ID=mRNA_M-pyrifera_M_contig9256.21410.1|Name=mRNA_M-pyrifera_M_contig9256.21410.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig9256:8270..10803+ (Macrocystis pyrifera P11B4 male)back to top |