mRNA_M-pyrifera_M_contig92552.21407.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92552.21407.1
Unique NamemRNA_M-pyrifera_M_contig92552.21407.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A3C0HTA4_9ACTN (Transket_pyr domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HTA4_9ACTN)

HSP 1 Score: 375 bits (963), Expect = 3.660e-128
Identity = 190/254 (74.80%), Postives = 218/254 (85.83%), Query Frame = 1
Query:    1 DVGESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            +  +S+ATRKA    LQ+++ LVPGLTGGGADLTGNTGTVIK  GVFS ADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMR AVRLAALS+A+V+FVWSHDSVGVGEDGPTHQPVEQ+ASLRAIPGLRVIRPADANE   AW++A+ SGGPTALI +RQN+PVLEG++   V  GAYVL+E  D  +TLVGTGSEV+VCVEAA  LA +G++ARVVS PSWELFA  +   +E+V+ P +P
Sbjct:   29 EARDSVATRKASGAALQAMLELVPGLTGGGADLTGNTGTVIKGHGVFSPADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRAAVRLAALSEAKVLFVWSHDSVGVGEDGPTHQPVEQIASLRAIPGLRVIRPADANEAIEAWKVAVGSGGPTALIMSRQNLPVLEGSAGAPVGAGAYVLQEADDAVLTLVGTGSEVSVCVEAAAALAGQGVSARVVSFPSWELFADADADTQEAVMRPELP 282          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A2D7S0W0_9ACTN (Transketolase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7S0W0_9ACTN)

HSP 1 Score: 378 bits (970), Expect = 3.690e-125
Identity = 190/252 (75.40%), Postives = 218/252 (86.51%), Query Frame = 1
Query:    7 GESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            G+S+ATRKA    LQ+++ LVPGLTGGGADLTGNTGT IK  GVFS ADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMR AVRLAALS+A+V+FVWSHDSVGVGEDGPTHQPVEQ+ASLRAIPGLRVIRPADANE   AW++A+ SGGPTALI +RQN+PVLEG++   V  GAYVL+E  D  +TLVGTGSEV+VCV+AA  LA++G+AARVVS PSWELFA  +   +E+V+ P +P
Sbjct:  328 GDSVATRKASGAALQAMLELVPGLTGGGADLTGNTGTAIKGHGVFSPADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRAAVRLAALSEAKVLFVWSHDSVGVGEDGPTHQPVEQIASLRAIPGLRVIRPADANEAIEAWKVAVRSGGPTALIMSRQNLPVLEGSAGAPVGGGAYVLQEADDAVVTLVGTGSEVSVCVDAAAALAEQGVAARVVSFPSWELFADADPDTQEAVMRPELP 579          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A6B1EER5_9ACTN (Transketolase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EER5_9ACTN)

HSP 1 Score: 377 bits (968), Expect = 2.270e-124
Identity = 195/252 (77.38%), Postives = 215/252 (85.32%), Query Frame = 1
Query:    7 GESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            G+S+ATRKA N TLQ+L+P VPGLTGGGADLTGNTGTV+ D GVFSA  PGGRQIYFGVREHAMGA+ANGMALHGGAIPVVGTFLVFADYMR AVRLAALS+A+VVFVWSHDSVGVGEDGPTHQPVE VASLRAIP L VIRPADA ET  AWR+A+ESGGPTALI TRQ VPVLEGT AE VA G Y + E  +P+ITLVGTGSEV+VC +AAD LA  GI+ARVVS+PSWELFA    S +  V+ P +P
Sbjct:  361 GQSVATRKASNVTLQALLPEVPGLTGGGADLTGNTGTVLADSGVFSAGGPGGRQIYFGVREHAMGAVANGMALHGGAIPVVGTFLVFADYMRPAVRLAALSEAKVVFVWSHDSVGVGEDGPTHQPVEHVASLRAIPDLTVIRPADATETVGAWRVAVESGGPTALILTRQGVPVLEGTLAESVAAGGYTVLEPDEPSITLVGTGSEVSVCCDAADLLAAEGISARVVSLPSWELFAQQPYSEQARVLRPDLP 612          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A7K1Z8W0_9ACTN (Transketolase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8W0_9ACTN)

HSP 1 Score: 372 bits (955), Expect = 1.240e-122
Identity = 193/254 (75.98%), Postives = 210/254 (82.68%), Query Frame = 1
Query:    1 DVGESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            D G+SIATRKA N TLQ+L  +VPGL+GGGADLTGNTGTVI D GVFSAADPGGRQIYFGVREH MG+IANGMALHGG+IPVVGTFLVFADYMR AVRLAA+S A  +FVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANE A AW +AI SGGPTALI +RQNVPVLEGTS+  V  GAYVL    D  ++LVGTGSEV+VC+ AA  LA  G+ ARVVSMPSWELF       R SVI   +P
Sbjct:  342 DAGDSIATRKASNVTLQALSSVVPGLSGGGADLTGNTGTVISDHGVFSAADPGGRQIYFGVREHGMGSIANGMALHGGSIPVVGTFLVFADYMRAAVRLAAISGAHAIFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANEAAAAWGVAISSGGPTALILSRQNVPVLEGTSSGNVGAGAYVLVSADDAVVSLVGTGSEVSVCLAAAAELAAEGLVARVVSMPSWELFEQMSPEYRASVISQDIP 595          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A7K2E9U3_9ACTN (Transketolase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E9U3_9ACTN)

HSP 1 Score: 371 bits (953), Expect = 2.090e-122
Identity = 191/252 (75.79%), Postives = 214/252 (84.92%), Query Frame = 1
Query:    7 GESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            G S+ATRKA + TLQ+L+P+VPGLTGGGADLTGNTGT I D GVFSA  PGGRQIYFGVREHAMGA+ANGMALHGGAIPVVGTFLVFADYMR AVRLAALS+A+VVFVWSHDSVGVGEDGPTHQP+E +ASLRAIP LRVIRPADA ET  AWRIA+ES GPTALI TRQ+VPVLEGT A+ V+ G Y L E A+P++TLVGTGSEVAVC +AA  LA  G+AARVVS+PSWELFA      +  V+ P +P
Sbjct:  328 GRSVATRKASSATLQALLPVVPGLTGGGADLTGNTGTAIADAGVFSAGGPGGRQIYFGVREHAMGAVANGMALHGGAIPVVGTFLVFADYMRPAVRLAALSEAKVVFVWSHDSVGVGEDGPTHQPIEHLASLRAIPNLRVIRPADATETVGAWRIAVESEGPTALILTRQDVPVLEGTRADAVSSGGYALLEPAEPSLTLVGTGSEVAVCCDAAALLAAEGVAARVVSLPSWELFADQPYPEQARVLRPDLP 579          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A6L7XF88_9ACTN (Transketolase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XF88_9ACTN)

HSP 1 Score: 373 bits (957), Expect = 1.560e-121
Identity = 192/252 (76.19%), Postives = 214/252 (84.92%), Query Frame = 1
Query:    7 GESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            G+S+ATRKA N TLQ+L+P+VPGLTGGGADLTGNTGTVI D GVFSA  PGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMR AVRLAAL++A+ VFVW HDSVGVGEDGPTHQPVE +ASLRAIPGLRVIRPADA ET  AWR+A+ES GPTALI TRQ VPVLEGT  + VA G Y LRE  +P++TLVGTGSEV+VC +AA  LA  G+AARVVS+PSWELFA    S +  V+ P +P
Sbjct:  465 GQSVATRKASNVTLQALLPVVPGLTGGGADLTGNTGTVIADGGVFSARGPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRPAVRLAALAEAKAVFVWPHDSVGVGEDGPTHQPVEHLASLRAIPGLRVIRPADATETVGAWRVALESAGPTALILTRQGVPVLEGTRTDAVAAGGYALREPDEPSLTLVGTGSEVSVCCDAAAILAAEGVAARVVSLPSWELFADQPYSEQARVLRPDLP 716          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A3M2G1D6_ACTSX (Transketolase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G1D6_ACTSX)

HSP 1 Score: 339 bits (869), Expect = 8.540e-110
Identity = 175/252 (69.44%), Postives = 201/252 (79.76%), Query Frame = 1
Query:    7 GESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            GESIATRKA N  L++L P VP LTGGGADLTGNTGT + + GVFS  + GGRQIYFGVREHAMGA+A GMA HGGA+PVVGTF VF+DYMRGAVRLAALS+ARVVFVWSHDSVGVGEDGPTHQPVE +A++RA+PGL VIRPADA ETA AWRIA+   GPTAL+ TRQNV VL GT   GV  G Y + E  D  I+LV TGSEV +CV+AA  LA+RG+ ARVVS+P WELFA      R++V+ P +P
Sbjct:  343 GESIATRKASNACLRALAPRVPALTGGGADLTGNTGTAMPEVGVFSVDERGGRQIYFGVREHAMGAVATGMARHGGALPVVGTFFVFSDYMRGAVRLAALSRARVVFVWSHDSVGVGEDGPTHQPVEHLAAMRAMPGLLVIRPADATETAGAWRIALTHDGPTALVLTRQNVTVLAGTDPAGVGAGGYPVLEADDADISLVATGSEVGLCVDAAAVLAERGVTARVVSLPCWELFAERPAHERDAVLRPDLP 594          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A7K2CSY4_9ACTN (Transketolase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2CSY4_9ACTN)

HSP 1 Score: 332 bits (850), Expect = 7.190e-107
Identity = 168/253 (66.40%), Postives = 201/253 (79.45%), Query Frame = 1
Query:    7 GESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTS-AEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            GES+ATRKA +  L ++  +VPGL  GGADLTGNTGT + D    ++A P GRQ+YFG+REHAMGA+ NG ALHGG +PV GTFLVF+DYMR AVRLAALS+A  +FVWSHDSVGVGEDGPTHQP+E V SLRAIPGLRV RPAD NE A AWR+A++  GP+A+I TRQNVP LEGT+ A+GVAQGAY L +  DP + LVGTGSEV+VCV+AA  L ++G AARVVSMP WELF+  +   + SV+LP VP
Sbjct:  348 GESVATRKASSACLNAMADVVPGLVAGGADLTGNTGTSLTDADPLNSAHPSGRQLYFGIREHAMGAVLNGAALHGGLLPVGGTFLVFSDYMRPAVRLAALSEAHSIFVWSHDSVGVGEDGPTHQPIEHVMSLRAIPGLRVFRPADGNEVAQAWRLAVDLDGPSAMILTRQNVPTLEGTATADGVAQGAYTLVDCLDPDVILVGTGSEVSVCVDAAAALGEQGTAARVVSMPCWELFSNQDPVYQASVLLPGVP 600          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A2N5JX25_9ACTN (Transketolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JX25_9ACTN)

HSP 1 Score: 331 bits (848), Expect = 1.630e-106
Identity = 171/257 (66.54%), Postives = 206/257 (80.16%), Query Frame = 1
Query:    1 DVGESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTS--AEGVAQGAYVLREVAD-PAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            + G  +ATRKA    L ++  +VPGL  GGADLT NTGT +KD+GV SAADPGGR IYFG+REHAMGAI NG ALHGG +PV GTF +F+DYMR AVRLAALS+A+VV+ W+HDSVG+GEDGPTHQPVE +A++RA+ GLRVIRPADANETA AWR+AIES GPTAL+ +RQ++PVLEGT+  A+ VA+GAYVL    D P I L+GTGSEV VC+ AA+ LA  G+ ARVVSMPSWELF   +ES +E VI P +P
Sbjct:  344 EAGAKMATRKASGACLNAIADVVPGLLAGGADLTDNTGTFLKDQGVQSAADPGGRLIYFGIREHAMGAIMNGAALHGGVVPVGGTFFIFSDYMRPAVRLAALSEAKVVYSWTHDSVGLGEDGPTHQPVEHIAAMRAMSGLRVIRPADANETAHAWRVAIESNGPTALLLSRQDLPVLEGTAERADDVARGAYVLSTGGDDPEILLIGTGSEVHVCLAAAEELAAGGVVARVVSMPSWELFEEQDESYQEEVIPPELP 600          
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Match: A0A6L7JK88_9ACTN (Transketolase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7JK88_9ACTN)

HSP 1 Score: 328 bits (841), Expect = 9.760e-106
Identity = 170/255 (66.67%), Postives = 202/255 (79.22%), Query Frame = 1
Query:    1 DVGESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAADPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLAALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANETATAWRIAIESGGPTALITTRQNVPVLEGTS-AEGVAQGAYVLREVADPAITLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVILPSVP 762
            D  ES+ATRKA +  L +++ +VPGL  GGADLTGNTGT + D+   S + P GRQI+FGVREHAMGA+ NG ALHGG +PV GTFLVF+DYMR AVRLAALS A  +FVWSHDSVGVGEDGPTHQP+EQV SLRAIPGLRV RPADANE   AW +AI+  GP+A++ TRQNVPVL GT+   GV++GAY L +VADP + LVGTGSEVAVCVEAA+RL   G+AA+VVSMP WELF A ++S +  V+ P VP
Sbjct:  326 DPQESLATRKASSACLNAMLDVVPGLITGGADLTGNTGTNLIDQEPLSPSYPAGRQIFFGVREHAMGAVLNGAALHGGVVPVGGTFLVFSDYMRPAVRLAALSGAHSIFVWSHDSVGVGEDGPTHQPIEQVMSLRAIPGLRVFRPADANEVVQAWHLAIDMQGPSAMVLTRQNVPVLVGTANGNGVSRGAYALSDVADPDVILVGTGSEVAVCVEAAERLGAIGVAAKVVSMPCWELFEAQDDSYQVEVLNPGVP 580          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92552.21407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0HTA4_9ACTN3.660e-12874.80Transket_pyr domain-containing protein n=1 Tax=Aci... [more]
A0A2D7S0W0_9ACTN3.690e-12575.40Transketolase n=8 Tax=Acidimicrobiaceae bacterium ... [more]
A0A6B1EER5_9ACTN2.270e-12477.38Transketolase n=2 Tax=Acidimicrobiaceae bacterium ... [more]
A0A7K1Z8W0_9ACTN1.240e-12275.98Transketolase n=2 Tax=Acidimicrobiaceae bacterium ... [more]
A0A7K2E9U3_9ACTN2.090e-12275.79Transketolase n=1 Tax=Acidimicrobiaceae bacterium ... [more]
A0A6L7XF88_9ACTN1.560e-12176.19Transketolase n=8 Tax=Acidimicrobiaceae bacterium ... [more]
A0A3M2G1D6_ACTSX8.540e-11069.44Transketolase n=1 Tax=Actinomyces sp. TaxID=29317 ... [more]
A0A7K2CSY4_9ACTN7.190e-10766.40Transketolase n=1 Tax=Acidimicrobiia bacterium Tax... [more]
A0A2N5JX25_9ACTN1.630e-10666.54Transketolase n=1 Tax=Actinomycetia bacterium TaxI... [more]
A0A6L7JK88_9ACTN9.760e-10666.67Transketolase n=1 Tax=Acidimicrobiia bacterium Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92552contigM-pyrifera_M_contig92552:3..764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score276.6
Seed ortholog evalue1.2e-71
Seed eggNOG ortholog1229780.BN381_410021
Preferred nametkt
KEGG rclassRC00032,RC00226,RC00571,RC01560
KEGG koko:K00615
KEGG ReactionR01067,R01641,R01830,R06590
KEGG Pathwayko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00004,M00007,M00165,M00167
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944
EggNOG free text desc.Transketolase, pyrimidine binding domain
EggNOG OGs2GJ1K@201174,3UW9I@52018,COG0021@1,COG0021@2
EC2.2.1.1
COG Functional cat.G
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816838.39865-CDS-M-pyrifera_M_contig92552:2..7641622816838.39865-CDS-M-pyrifera_M_contig92552:2..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92552 3..764 +
1692278208.330884-CDS-M-pyrifera_M_contig92552:2..7641692278208.330884-CDS-M-pyrifera_M_contig92552:2..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92552 3..764 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92552.21407.1prot_M-pyrifera_M_contig92552.21407.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92552 3..764 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92552.21407.1

>prot_M-pyrifera_M_contig92552.21407.1 ID=prot_M-pyrifera_M_contig92552.21407.1|Name=mRNA_M-pyrifera_M_contig92552.21407.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
DVGESIATRKACNTTLQSLVPLVPGLTGGGADLTGNTGTVIKDEGVFSAA
DPGGRQIYFGVREHAMGAIANGMALHGGAIPVVGTFLVFADYMRGAVRLA
ALSQARVVFVWSHDSVGVGEDGPTHQPVEQVASLRAIPGLRVIRPADANE
TATAWRIAIESGGPTALITTRQNVPVLEGTSAEGVAQGAYVLREVADPAI
TLVGTGSEVAVCVEAADRLADRGIAARVVSMPSWELFAATEESVRESVIL
PSVP
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mRNA from alignment at M-pyrifera_M_contig92552:3..764+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92552.21407.1 ID=mRNA_M-pyrifera_M_contig92552.21407.1|Name=mRNA_M-pyrifera_M_contig92552.21407.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig92552:3..764+ (Macrocystis pyrifera P11B4 male)
GATGTCGGCGAATCGATCGCCACCCGCAAGGCGTGCAACACCACGCTGCA GTCGCTCGTCCCGCTGGTGCCCGGCCTCACCGGAGGCGGCGCCGACCTCA CCGGCAACACCGGGACGGTCATCAAGGACGAGGGGGTCTTCTCCGCCGCC GATCCGGGTGGGCGCCAGATCTACTTCGGTGTCCGCGAACACGCGATGGG AGCGATCGCCAACGGCATGGCGCTCCACGGGGGCGCCATCCCCGTCGTCG GCACGTTTCTGGTCTTCGCCGACTACATGCGTGGCGCGGTCCGGCTCGCC GCCCTCTCCCAGGCCCGTGTGGTCTTCGTGTGGAGCCACGACTCCGTGGG CGTCGGCGAGGACGGGCCCACCCACCAGCCGGTCGAGCAGGTCGCCTCGC TGCGGGCCATCCCCGGTCTGCGGGTGATCCGGCCCGCTGATGCCAACGAA ACCGCCACCGCGTGGCGCATCGCCATCGAATCGGGCGGGCCCACCGCGCT GATCACCACTCGCCAGAACGTGCCCGTGCTCGAGGGAACCTCCGCCGAGG GCGTCGCCCAGGGCGCCTACGTGTTGCGTGAGGTCGCCGACCCGGCGATC ACCCTCGTCGGCACCGGCTCCGAGGTCGCAGTGTGCGTCGAGGCCGCCGA TCGTCTGGCCGATCGGGGCATCGCCGCCCGGGTGGTCTCCATGCCCAGCT GGGAGCTCTTCGCCGCCACCGAAGAGTCGGTGCGCGAGTCGGTCATCCTT CCCTCCGTTCCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92552:3..764+

>mRNA_M-pyrifera_M_contig92552.21407.1 ID=mRNA_M-pyrifera_M_contig92552.21407.1|Name=mRNA_M-pyrifera_M_contig92552.21407.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig92552:3..764+ (Macrocystis pyrifera P11B4 male)
GATGTCGGCGAATCGATCGCCACCCGCAAGGCGTGCAACACCACGCTGCA
GTCGCTCGTCCCGCTGGTGCCCGGCCTCACCGGAGGCGGCGCCGACCTCA
CCGGCAACACCGGGACGGTCATCAAGGACGAGGGGGTCTTCTCCGCCGCC
GATCCGGGTGGGCGCCAGATCTACTTCGGTGTCCGCGAACACGCGATGGG
AGCGATCGCCAACGGCATGGCGCTCCACGGGGGCGCCATCCCCGTCGTCG
GCACGTTTCTGGTCTTCGCCGACTACATGCGTGGCGCGGTCCGGCTCGCC
GCCCTCTCCCAGGCCCGTGTGGTCTTCGTGTGGAGCCACGACTCCGTGGG
CGTCGGCGAGGACGGGCCCACCCACCAGCCGGTCGAGCAGGTCGCCTCGC
TGCGGGCCATCCCCGGTCTGCGGGTGATCCGGCCCGCTGATGCCAACGAA
ACCGCCACCGCGTGGCGCATCGCCATCGAATCGGGCGGGCCCACCGCGCT
GATCACCACTCGCCAGAACGTGCCCGTGCTCGAGGGAACCTCCGCCGAGG
GCGTCGCCCAGGGCGCCTACGTGTTGCGTGAGGTCGCCGACCCGGCGATC
ACCCTCGTCGGCACCGGCTCCGAGGTCGCAGTGTGCGTCGAGGCCGCCGA
TCGTCTGGCCGATCGGGGCATCGCCGCCCGGGTGGTCTCCATGCCCAGCT
GGGAGCTCTTCGCCGCCACCGAAGAGTCGGTGCGCGAGTCGGTCATCCTT
CCCTCCGTTCCTGATGTCGGCGAATCGATCGCCACCCGCAAGGCGTGCAA
CACCACGCTGCAGTCGCTCGTCCCGCTGGTGCCCGGCCTCACCGGAGGCG
GCGCCGACCTCACCGGCAACACCGGGACGGTCATCAAGGACGAGGGGGTC
TTCTCCGCCGCCGATCCGGGTGGGCGCCAGATCTACTTCGGTGTCCGCGA
ACACGCGATGGGAGCGATCGCCAACGGCATGGCGCTCCACGGGGGCGCCA
TCCCCGTCGTCGGCACGTTTCTGGTCTTCGCCGACTACATGCGTGGCGCG
GTCCGGCTCGCCGCCCTCTCCCAGGCCCGTGTGGTCTTCGTGTGGAGCCA
CGACTCCGTGGGCGTCGGCGAGGACGGGCCCACCCACCAGCCGGTCGAGC
AGGTCGCCTCGCTGCGGGCCATCCCCGGTCTGCGGGTGATCCGGCCCGCT
GATGCCAACGAAACCGCCACCGCGTGGCGCATCGCCATCGAATCGGGCGG
GCCCACCGCGCTGATCACCACTCGCCAGAACGTGCCCGTGCTCGAGGGAA
CCTCCGCCGAGGGCGTCGCCCAGGGCGCCTACGTGTTGCGTGAGGTCGCC
GACCCGGCGATCACCCTCGTCGGCACCGGCTCCGAGGTCGCAGTGTGCGT
CGAGGCCGCCGATCGTCTGGCCGATCGGGGCATCGCCGCCCGGGTGGTCT
CCATGCCCAGCTGGGAGCTCTTCGCCGCCACCGAAGAGTCGGTGCGCGAG
TCGGTCATCCTTCCCTCCGTTCCT
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