mRNA_M-pyrifera_M_contig92550.21406.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92550.21406.1
Unique NamemRNA_M-pyrifera_M_contig92550.21406.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92550.21406.1 vs. uniprot
Match: A0A517PR12_9PLAN (Non-specific serine/threonine protein kinase n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517PR12_9PLAN)

HSP 1 Score: 457 bits (1177), Expect = 3.510e-155
Identity = 241/254 (94.88%), Postives = 246/254 (96.85%), Query Frame = 1
Query:    1 ILTAEPVPPSREVEGVAPELGAICLKMLAKKIDDRYQSMQVVVDALTAFLKKSGQTSAAKSKRKSSSTPERQPASHWFDFRNGSVSGLAVFLAAALPIVFLLGAIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSGKQGEVELGIGPHEVTVTHNGTIVKGYDQFHFVVAENGNEPLVIEVLDQTAPPVEKPVAKPASESPPLNEPDPVLARLLAMMRQKPVMVQEFDFNRGPDKIGVSNVTFRNGRMLIE 762
            ILTAEPVPPSREVEGVAPEL AICLKMLAKKIDDRYQSMQ VVDALTAFLKKSGQTSAAKSKRKSS TPERQPASHWFDFRNGSVSG AVFLAAALPIVFLLGAIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSGKQGEVEL IGPHEVTVTHNGTIVKGYDQFHFVVAENGNEPLVIEVLDQTAPPVEKPVAKPASESPPLNEPDPVLARLLAMMRQKP MVQEFDF RGP++I VSN+TFR+GR+LIE
Sbjct:  320 ILTAEPVPPSREVEGVAPELEAICLKMLAKKIDDRYQSMQEVVDALTAFLKKSGQTSAAKSKRKSSLTPERQPASHWFDFRNGSVSGRAVFLAAALPIVFLLGAIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSGKQGEVELAIGPHEVTVTHNGTIVKGYDQFHFVVAENGNEPLVIEVLDQTAPPVEKPVAKPASESPPLNEPDPVLARLLAMMRQKPDMVQEFDFKRGPERIDVSNLTFRDGRLLIE 573          
BLAST of mRNA_M-pyrifera_M_contig92550.21406.1 vs. uniprot
Match: A6C665_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Gimesia maris DSM 8797 TaxID=344747 RepID=A6C665_9PLAN)

HSP 1 Score: 229 bits (584), Expect = 1.010e-65
Identity = 136/282 (48.23%), Postives = 174/282 (61.70%), Query Frame = 1
Query:    1 ILTAEPVPPSREVEGVAPELGAICLKMLAKKIDDRYQSMQVVVDALTAFLKK---------------SGQTSA-------------AKSKRKSSSTPERQPASHWFDFRNGSVSGLAVFLAAALPIVFLLGAIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSGKQGEVELGIGPHEVTVTHNGTIVKGYDQFHFVVAENGNEPLVIEVLDQTAPPVEKPVAKPASESPPLNEPDPVLARLLAMMRQKPVMVQEFDFNRGPDKIGVSNVTFRNGRMLIE 762
            I+  +PV PS+  + + PEL AICLKM+AKK ++RYQSM+ VVDALTA+LK                SG+ +               K ++   S+   Q   +WFDF NG  +      AAALP   LLGAI  LFR G+RTV+VTIDDP+A VTIDGK +V+F G  G+V+L IG HEVTVT +G ++KG+DQF F V  NG + L IEVLD+   P  K  A P      +++PDPVL+ LLA+M+QKPV VQEFDFNR P + G      R+GRMLIE
Sbjct:  327 IIAVDPVLPSKYEQRIDPELEAICLKMMAKKKEERYQSMREVVDALTAYLKNPRKLSTPCPQKANNPSGKAAVPVGNEGFPALRKPVKKQKSERSSGNHQRRFNWFDFFNGDSARKKTIFAAALPAFLLLGAITFLFRTGDRTVKVTIDDPTAGVTIDGKDKVKFDGNMGQVDLEIGQHEVTVTRDGAVIKGWDQFKFEVENNGKQTLAIEVLDRGEQPP-KVSAAPRKTRAAIDQPDPVLSELLAIMKQKPVHVQEFDFNRAPLRTGSYFTAIRDGRMLIE 607          
BLAST of mRNA_M-pyrifera_M_contig92550.21406.1 vs. uniprot
Match: UPI00118AEF1E (serine/threonine protein kinase n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118AEF1E)

HSP 1 Score: 135 bits (340), Expect = 1.850e-32
Identity = 92/221 (41.63%), Postives = 117/221 (52.94%), Query Frame = 1
Query:    1 ILTAEPVPPSREVEGVAPELGAICLKMLAKKIDDRYQSMQVVVDALTAFLKKSGQTSAAKSKRKSSSTP-----------------------------ERQPASHWFDFRNGSVSGLAVFLAAALPIVFLLGAIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSG-KQGEVELGIGPHEVTVTHNGTIVKGYDQFHFVVAENGNEPLVIEVLDQTAPP 573
            I+  EP  PS   +GV  EL AICLKM+AK   DRYQSMQ V +ALTA+LKK  + SA KS+ + +                                E++P +     +  ++    +  A +   +F+   I LLF+   R+V VTIDDPSA V  DG Q V F G K G VEL +GPH VTVT NGTIVKG++Q  +VV E G   L IEVLD    P
Sbjct:  327 IIGTEPDRPSNIRDGVDQELEAICLKMMAKNKADRYQSMQEVAEALTAYLKKPAKKSADKSRSRQTQAADSPQLEKPPLPAPPTRISARQRKPRRKQTEKRPTTLLEHIKKSTMRARIIAAAVSGVPLFVFAVITLLFQVEGRSVAVTIDDPSANVLFDGNQYVEFDGTKVGHVELDVGPHTVTVTRNGTIVKGWEQISYVVKEEGKNLLEIEVLDSPKSP 547          
BLAST of mRNA_M-pyrifera_M_contig92550.21406.1 vs. uniprot
Match: A0A2E7DB69_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7DB69_9PLAN)

HSP 1 Score: 65.9 bits (159), Expect = 1.220e-8
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 1
Query:    1 ILTAEPVPPSREVEGVAPELGAICLKMLAKKIDDRYQSMQVVVDALTAFLKK 156
            I T EP PPS+   G+ PEL AICLKM+AKKI+DRY SM+ V  ALT +LKK
Sbjct:  276 IATDEPKPPSKLRRGLEPELEAICLKMMAKKIEDRYDSMEKVASALTKYLKK 327          
BLAST of mRNA_M-pyrifera_M_contig92550.21406.1 vs. uniprot
Match: A0A518HXT8_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Stieleria neptunia TaxID=2527979 RepID=A0A518HXT8_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 1.160e-7
Identity = 57/186 (30.65%), Postives = 83/186 (44.62%), Query Frame = 1
Query:    1 ILTAEPVPPSREVEGVAPELGAICLKMLAKKIDDRYQSMQVVVDALTAFLKKSGQTSAAKSKRKSSSTPERQPASHWFDFRNGSV-SGLAVFLAAALPIVFLLGAIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSGKQGEVELGIGPHEVTVTHNGTIVKGYDQFHFVVAE-NGNEPLVIEV 552
            +L   PVPPSR +  + PEL  ICL M++K+ +DRY SM+ V   L  +L+           R+ +   +   +S  F  R G V S L+V L   L       ++VL+ R     V+  I+     V IDG  R      +   +L  GPHE+ +   GT V     F     E  G   L +E+
Sbjct:  401 VLRDAPVPPSRHLPSLDPELETICLTMMSKRAEDRYASMEEVSGRLGQWLQ-----------REPTREVDCSASSRSFPLRIGLVASALSVLLLVVL-------SVVLIVRTQHGEVRFEIEPSEIAVIIDGN-RFNLEDLRQPQQLHSGPHELAIEIGGTPVPLDRDFSIETVEFQGRAKLAVEI 567          
BLAST of mRNA_M-pyrifera_M_contig92550.21406.1 vs. uniprot
Match: A0A517T8K2_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517T8K2_9PLAN)

HSP 1 Score: 62.8 bits (151), Expect = 1.590e-7
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 1
Query:  310 AIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSGKQGEVELGIGPHEVTVTHNGTIVKGYDQFHFVVAENGNEPLVIEVL 555
            AIVL  R+  + VQ+TIDDP+AVV+ID   R    G+ G V L +G H V V  +G +V G+++F F V +     L I  L
Sbjct:  569 AIVLYLRSDGQAVQITIDDPTAVVSIDNN-RANIKGQAGVVNLSVGDHIVRVERDGMVVTGWEKFLFEVKKGQKNVLTINTL 649          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92550.21406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A517PR12_9PLAN3.510e-15594.88Non-specific serine/threonine protein kinase n=7 T... [more]
A6C665_9PLAN1.010e-6548.23Non-specific serine/threonine protein kinase n=1 T... [more]
UPI00118AEF1E1.850e-3241.63serine/threonine protein kinase n=1 Tax=Gimesia ch... [more]
A0A2E7DB69_9PLAN1.220e-863.46Non-specific serine/threonine protein kinase n=1 T... [more]
A0A518HXT8_9BACT1.160e-730.65Non-specific serine/threonine protein kinase n=1 T... [more]
A0A517T8K2_9PLAN1.590e-742.68Non-specific serine/threonine protein kinase n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92550contigM-pyrifera_M_contig92550:3..764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score231.5
Seed ortholog evalue4.4e-58
Seed eggNOG ortholog344747.PM8797T_31203
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG0515 Serine threonine protein kinase
EggNOG OGs2IZDR@203682,COG0515@1,COG0515@2
COG Functional cat.KLT
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816838.3676314-CDS-M-pyrifera_M_contig92550:2..7641622816838.3676314-CDS-M-pyrifera_M_contig92550:2..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92550 3..764 -
1692278208.3148293-CDS-M-pyrifera_M_contig92550:2..7641692278208.3148293-CDS-M-pyrifera_M_contig92550:2..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92550 3..764 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92550.21406.1prot_M-pyrifera_M_contig92550.21406.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92550 3..764 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92550.21406.1

>prot_M-pyrifera_M_contig92550.21406.1 ID=prot_M-pyrifera_M_contig92550.21406.1|Name=mRNA_M-pyrifera_M_contig92550.21406.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
ILTAEPVPPSREVEGVAPELGAICLKMLAKKIDDRYQSMQVVVDALTAFL
KKSGQTSAAKSKRKSSSTPERQPASHWFDFRNGSVSGLAVFLAAALPIVF
LLGAIVLLFRAGERTVQVTIDDPSAVVTIDGKQRVRFSGKQGEVELGIGP
HEVTVTHNGTIVKGYDQFHFVVAENGNEPLVIEVLDQTAPPVEKPVAKPA
SESPPLNEPDPVLARLLAMMRQKPVMVQEFDFNRGPDKIGVSNVTFRNGR
MLIE
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mRNA from alignment at M-pyrifera_M_contig92550:3..764-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92550.21406.1 ID=mRNA_M-pyrifera_M_contig92550.21406.1|Name=mRNA_M-pyrifera_M_contig92550.21406.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig92550:3..764- (Macrocystis pyrifera P11B4 male)
ATTTTGACAGCAGAGCCTGTTCCCCCTTCCCGTGAGGTAGAGGGCGTCGC ACCCGAACTCGGAGCGATCTGCCTGAAAATGCTGGCGAAGAAAATCGACG ATCGTTATCAGTCGATGCAGGTGGTTGTCGATGCGCTGACTGCGTTTCTT AAAAAGTCGGGACAGACCTCTGCAGCCAAAAGTAAGCGAAAGTCATCTTC GACGCCGGAGCGGCAACCGGCGTCTCACTGGTTTGACTTCCGGAATGGTT CTGTGTCAGGTCTGGCGGTGTTCCTGGCGGCTGCATTGCCGATCGTATTT CTGCTGGGGGCGATCGTCCTGTTGTTCCGTGCCGGTGAGCGGACCGTGCA GGTGACGATTGATGATCCGTCAGCCGTGGTGACCATCGATGGAAAACAGC GAGTCAGATTTTCAGGCAAGCAGGGTGAGGTTGAGTTGGGGATCGGTCCG CATGAAGTGACAGTGACCCACAACGGGACCATCGTCAAAGGCTATGATCA GTTTCATTTTGTGGTTGCGGAAAACGGGAACGAACCGCTGGTCATCGAAG TGCTGGATCAGACTGCACCACCTGTTGAAAAACCAGTGGCAAAACCTGCC AGCGAAAGTCCTCCCCTGAATGAACCCGATCCCGTGCTGGCCCGACTGCT GGCGATGATGCGACAGAAGCCAGTCATGGTTCAGGAGTTTGACTTTAACC GTGGTCCGGACAAGATTGGCGTTTCAAATGTTACCTTTCGGAACGGTCGT ATGTTGATCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92550:3..764-

>mRNA_M-pyrifera_M_contig92550.21406.1 ID=mRNA_M-pyrifera_M_contig92550.21406.1|Name=mRNA_M-pyrifera_M_contig92550.21406.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig92550:3..764- (Macrocystis pyrifera P11B4 male)
ATTTTGACAGCAGAGCCTGTTCCCCCTTCCCGTGAGGTAGAGGGCGTCGC
ACCCGAACTCGGAGCGATCTGCCTGAAAATGCTGGCGAAGAAAATCGACG
ATCGTTATCAGTCGATGCAGGTGGTTGTCGATGCGCTGACTGCGTTTCTT
AAAAAGTCGGGACAGACCTCTGCAGCCAAAAGTAAGCGAAAGTCATCTTC
GACGCCGGAGCGGCAACCGGCGTCTCACTGGTTTGACTTCCGGAATGGTT
CTGTGTCAGGTCTGGCGGTGTTCCTGGCGGCTGCATTGCCGATCGTATTT
CTGCTGGGGGCGATCGTCCTGTTGTTCCGTGCCGGTGAGCGGACCGTGCA
GGTGACGATTGATGATCCGTCAGCCGTGGTGACCATCGATGGAAAACAGC
GAGTCAGATTTTCAGGCAAGCAGGGTGAGGTTGAGTTGGGGATCGGTCCG
CATGAAGTGACAGTGACCCACAACGGGACCATCGTCAAAGGCTATGATCA
GTTTCATTTTGTGGTTGCGGAAAACGGGAACGAACCGCTGGTCATCGAAG
TGCTGGATCAGACTGCACCACCTGTTGAAAAACCAGTGGCAAAACCTGCC
AGCGAAAGTCCTCCCCTGAATGAACCCGATCCCGTGCTGGCCCGACTGCT
GGCGATGATGCGACAGAAGCCAGTCATGGTTCAGGAGTTTGACTTTAACC
GTGGTCCGGACAAGATTGGCGTTTCAAATGTTACCTTTCGGAACGGTCGT
ATGTTGATCGAGATTTTGACAGCAGAGCCTGTTCCCCCTTCCCGTGAGGT
AGAGGGCGTCGCACCCGAACTCGGAGCGATCTGCCTGAAAATGCTGGCGA
AGAAAATCGACGATCGTTATCAGTCGATGCAGGTGGTTGTCGATGCGCTG
ACTGCGTTTCTTAAAAAGTCGGGACAGACCTCTGCAGCCAAAAGTAAGCG
AAAGTCATCTTCGACGCCGGAGCGGCAACCGGCGTCTCACTGGTTTGACT
TCCGGAATGGTTCTGTGTCAGGTCTGGCGGTGTTCCTGGCGGCTGCATTG
CCGATCGTATTTCTGCTGGGGGCGATCGTCCTGTTGTTCCGTGCCGGTGA
GCGGACCGTGCAGGTGACGATTGATGATCCGTCAGCCGTGGTGACCATCG
ATGGAAAACAGCGAGTCAGATTTTCAGGCAAGCAGGGTGAGGTTGAGTTG
GGGATCGGTCCGCATGAAGTGACAGTGACCCACAACGGGACCATCGTCAA
AGGCTATGATCAGTTTCATTTTGTGGTTGCGGAAAACGGGAACGAACCGC
TGGTCATCGAAGTGCTGGATCAGACTGCACCACCTGTTGAAAAACCAGTG
GCAAAACCTGCCAGCGAAAGTCCTCCCCTGAATGAACCCGATCCCGTGCT
GGCCCGACTGCTGGCGATGATGCGACAGAAGCCAGTCATGGTTCAGGAGT
TTGACTTTAACCGTGGTCCGGACAAGATTGGCGTTTCAAATGTTACCTTT
CGGAACGGTCGTATGTTGATCGAG
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