mRNA_M-pyrifera_M_contig92538.21401.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92538.21401.1
Unique NamemRNA_M-pyrifera_M_contig92538.21401.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: A0A351MEX9_9GAMM (UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MEX9_9GAMM)

HSP 1 Score: 354 bits (909), Expect = 3.200e-121
Identity = 164/239 (68.62%), Postives = 191/239 (79.92%), Query Frame = 1 
Query:    1 FRSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            FR++W+SDVHLGFRGC+A+ LL FL+ +ECETLYLVGDI+D+W +KKR YWPQAHN+VIR ILGKAK GT+VVYVPGNHDE +RDF G  FGNI I     H R DG ++L+LHGDQFD  V  S++L  +GS  Y+ LL+LNI+VN VRR LGFP WSLA +LK+KVKNAVQ I  FE AVA  A R GV GVVCGHIHRAEI RI D+ YCNCGDWVESCTALVEH +G LE+L WS
Sbjct:   15 FRTIWISDVHLGFRGCSANFLLDFLRKSECETLYLVGDIIDVWAMKKRPYWPQAHNNVIRTILGKAKHGTRVVYVPGNHDELVRDFDGMHFGNIEITNMTTHVRADGQRMLVLHGDQFDTVVQYSKWLAVVGSAMYDWLLRLNIIVNFVRRKLGFPYWSLAAFLKHKVKNAVQYIGKFEEAVAFEAGRQGVDGVVCGHIHRAEITRIGDVTYCNCGDWVESCTALVEHFDGSLELLHWS 253
[Close]
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: F5T2L5_9GAMM (Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase-like protein n=5 Tax=root TaxID=1 RepID=F5T2L5_9GAMM)

HSP 1 Score: 345 bits (886), Expect = 9.440e-118
Identity = 162/238 (68.07%), Postives = 189/238 (79.41%), Query Frame = 1 
Query:    4 RSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            RSVW+SD+HLGFRGC+AD LL FL   EC+ LYLVGDIVD+W++KKR +WPQAHN+V+R +LGKAK  TKV+YVPGNHDE LRDF G  FGNI I  + +HT  DG KLLILHGDQFD+ V  S  L KLG   Y+ LL+ N +VN VRR +GF  WSLA +LK+KVKNAVQ ISNFE AVA  AA+ GV GVVCGHIHRAEI RIN++ Y NCGDWVESCTALVEH NG++EIL W+
Sbjct:   14 RSVWISDIHLGFRGCSADFLLDFLHKVECDYLYLVGDIVDVWEMKKRMFWPQAHNNVVRTLLGKAKHNTKVIYVPGNHDELLRDFNGAVFGNIEIQNEMIHTTADGKKLLILHGDQFDSVVKISPLLAKLGGRLYDYLLRANRLVNYVRRKMGFSYWSLAAFLKHKVKNAVQYISNFEEAVAHEAAKQGVDGVVCGHIHRAEITRINNVDYFNCGDWVESCTALVEHPNGKMEILYWA 251
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BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: A0A0K2GJT6_NITMO (Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase-like protein n=1 Tax=Nitrospira moscoviensis TaxID=42253 RepID=A0A0K2GJT6_NITMO)

HSP 1 Score: 341 bits (874), Expect = 1.020e-115
Identity = 155/239 (64.85%), Postives = 191/239 (79.92%), Query Frame = 1 
Query:    1 FRSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            +R+VW+SDVHLGFRGC+AD LL+FL+S ECE LYLVGDI+DIW++KKR +WPQ+HN+V+R ILGKAK G  VVYVPGNHDE LRDF    FGN+ IVE+A+HT  DG +LL+ HGD+FD+ V  SR +  LG+  Y+ LL+ N VV+ VRR    P WSLA +LK+KVKNAVQ ISNFE AVA   AR GV GVVCGHIHR EI ++ND++YCNCGDWVESC+ALVEH +G LE++ W+
Sbjct:   12 YRTVWISDVHLGFRGCSADHLLSFLRSVECEYLYLVGDIIDIWEMKKRMFWPQSHNNVVRTILGKAKHGVNVVYVPGNHDELLRDFHDMTFGNVHIVEEAIHTNADGRRLLVTHGDKFDSVVRCSRAMAMLGTRLYDWLLKANYVVHGVRRRFNLPYWSLAGFLKHKVKNAVQFISNFEAAVAYETARLGVDGVVCGHIHRPEITKLNDVIYCNCGDWVESCSALVEHHDGSLELIRWA 250
[Close]
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: A0A0S4KW64_9BACT (Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase-like protein n=2 Tax=Nitrospira TaxID=1234 RepID=A0A0S4KW64_9BACT)

HSP 1 Score: 340 bits (873), Expect = 1.850e-115
Identity = 157/239 (65.69%), Postives = 191/239 (79.92%), Query Frame = 1 
Query:    1 FRSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            FR+VW+SDVHLGFRGC+AD LL FL S  CE LYLVGDI+DIW++KKR +WPQ+HN+V+R ILGKAK GTKVVYVPGNHDE LRD+    FGN+ IV++A+HT  DG +LL+ HGD+FD+ V SSR +  LG+  Y+ LL+ N +V+  RR L  P WSLA +LK+KVKNAVQ ISNFE AVA   AR GV GVVCGHIHR EI R+ND++YCNCGDWVESC+ALVEH +G LE+L W+
Sbjct:   12 FRTVWISDVHLGFRGCSADHLLDFLHSVHCEYLYLVGDIIDIWEMKKRMFWPQSHNNVVRTILGKAKHGTKVVYVPGNHDELLRDYHDMTFGNVHIVKEAIHTGADGRRLLVTHGDKFDSVVRSSRAIAMLGTRLYDWLLKANYLVHWFRRKLDLPHWSLAGFLKHKVKNAVQFISNFERAVAYETARLGVEGVVCGHIHRPEITRLNDVIYCNCGDWVESCSALVEHHDGSLELLRWA 250
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BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: C0N6A6_9GAMM (Ser/Thr protein phosphatase family protein n=3 Tax=Methylophaga TaxID=40222 RepID=C0N6A6_9GAMM)

HSP 1 Score: 339 bits (869), Expect = 3.640e-115
Identity = 162/238 (68.07%), Postives = 187/238 (78.57%), Query Frame = 1 
Query:    4 RSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            RSVW+SD+HLGFRGC+AD LL FL   EC+ LYLVGDI+D+W++KK+ +WPQAHN+VIR +LGKAK  TKVVYVPGNHDE LRDF G  FGN+ I  + +HT  D  KLLILHGDQFD+ V  S  L K+GS  YE LL+ N  VN VRR LGF  WSLA +LK++VKNAVQ ISNFE AVA  AAR GV GVVCGHIHRAEIAR +DI Y NCGDWVESCTALVEH +G +EIL W+
Sbjct:   14 RSVWISDIHLGFRGCSADFLLDFLHRVECDYLYLVGDIIDVWEMKKKMFWPQAHNNVIRTLLGKAKHNTKVVYVPGNHDEVLRDFDGAVFGNVEIQNEIIHTTADNKKLLILHGDQFDSVVKISPLLAKVGSRLYEYLLRANRWVNFVRRKLGFSYWSLAAFLKHRVKNAVQYISNFEEAVAHEAARQGVDGVVCGHIHRAEIARHHDIDYFNCGDWVESCTALVEHPDGTMEILNWT 251
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BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: A0A2A5BG75_9GAMM (UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2A5BG75_9GAMM)

HSP 1 Score: 337 bits (864), Expect = 2.170e-114
Identity = 160/238 (67.23%), Postives = 186/238 (78.15%), Query Frame = 1 
Query:    4 RSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            RSVW+SDVHLGFRGC+AD LL FL+  EC+ LYLVGDI+DIW++KKR YWPQ HN+VIR +LGKAK  TKV+YVPGNHDE LRDF G  FGNI I  + +HT  DG KLLILHGDQFD  V  S FL KLGS  Y+ LL+ N  VN VRR +GFP WSLA +LK+KVKNAV+ I +FE AVA  AA+ GV G+VCGHIHRAEI+RI  + Y NCGDWVESCTALVE  +G +EIL W+
Sbjct:   14 RSVWISDVHLGFRGCSADYLLHFLQHVECDYLYLVGDIIDIWEMKKRLYWPQEHNNVIRTLLGKAKHNTKVIYVPGNHDEMLRDFNGVVFGNIEIRNETIHTTADGKKLLILHGDQFDGVVQFSPFLAKLGSRLYDYLLRANRWVNYVRRKMGFPYWSLAAFLKHKVKNAVKYIGDFEKAVAHEAAKQGVDGIVCGHIHRAEISRIEGVDYFNCGDWVESCTALVEQQDGSMEILKWA 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: M7PTC5_9GAMM (UDP-2,3-diacylglucosamine hydrolase-like protein n=2 Tax=Methylophaga lonarensis TaxID=999151 RepID=M7PTC5_9GAMM)

HSP 1 Score: 337 bits (863), Expect = 2.980e-114
Identity = 158/238 (66.39%), Postives = 186/238 (78.15%), Query Frame = 1 
Query:    4 RSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            R+VW+SD+HLGFRGC+AD LL FL   EC+ LYLVGDI+D+W++KKR +WPQ HN+VIR ILGKAK  TKVVYVPGNHDE LRDF G  FGN++I  + +HT  D  KLLILHGDQFD+ V  S  L K+G   Y+LLL+ N  VN VRR +GF  WSLA +LK+KVKNAVQ ISNFE AVA  AAR GV GVVCGHIHRAEI R++DI Y NCGDWVESCTALVE  +G +EI+ W+
Sbjct:   14 RTVWISDIHLGFRGCSADMLLNFLHQVECDYLYLVGDIIDVWEMKKRMFWPQEHNNVIRTILGKAKHNTKVVYVPGNHDEVLRDFDGAVFGNVSIRNEIIHTTADQRKLLILHGDQFDSVVKCSPLLAKIGGRLYDLLLRANRTVNLVRRKMGFSYWSLAAFLKHKVKNAVQYISNFEEAVAHEAARQGVDGVVCGHIHRAEITRLHDIDYYNCGDWVESCTALVERQDGRMEIINWA 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: A0A1Y5DU42_9GAMM (UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Methylophaga sp. 41_12_T18 TaxID=1856284 RepID=A0A1Y5DU42_9GAMM)

HSP 1 Score: 336 bits (861), Expect = 6.650e-114
Identity = 161/240 (67.08%), Postives = 189/240 (78.75%), Query Frame = 1 
Query:    4 RSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWSHE 723
            RSVW+SD+HLGFRGC+AD LL FL+  EC+ LYLVGDIVD+W++KKR +WPQAHN+VIR ILGKAK  TKV+Y+PGNHDE LRDF G  FGN+ I  +A+HT  DG KLLILHGD+FD+ V  S  L K+GS  Y+ LL+ N  VN VRR LGF  WSLA +LK+KVKNAVQ ISNFE AVA  AA   V GVVCGHIHRAE+  IN+I Y NCGDWVESCTALVEH +G++EIL W+ E
Sbjct:   14 RSVWISDIHLGFRGCSADYLLNFLQQVECDYLYLVGDIVDVWEMKKRMFWPQAHNNVIRTILGKAKHDTKVIYIPGNHDEVLRDFDGAVFGNVEIQNEAMHTTADGRKLLILHGDKFDSIVKISPALAKVGSRLYDYLLRTNRWVNFVRRKLGFSYWSLAAFLKHKVKNAVQYISNFEEAVANEAANLDVDGVVCGHIHRAEMTTINNIEYYNCGDWVESCTALVEHPDGKMEILKWTDE 253
[Close]
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: A0A7C1Z4H9_9GAMM (UDP-2,3-diacylglucosamine diphosphatase n=2 Tax=root TaxID=1 RepID=A0A7C1Z4H9_9GAMM)

HSP 1 Score: 335 bits (860), Expect = 8.510e-114
Identity = 157/238 (65.97%), Postives = 185/238 (77.73%), Query Frame = 1 
Query:    4 RSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            RSVW+SD+HLGFRGC+AD LL FL   EC+ LYLVGDI+DIW++ KR +WPQAHN+VIR ILGKAK  TKV+YVPGNHDE LRDF G  FGN+ I  + +HT  DG KLLI+HGD+FD  V  S  + K+GS  Y+ LL+ N  VN +RR LGFP WSLA +LK+KVKNAVQ ISNFE AVA  AAR  V GVVCGHIHRAEI R++DI Y NCGDWVESCTAL+E  +G +EIL W+
Sbjct:   14 RSVWISDIHLGFRGCSADYLLDFLHHVECDYLYLVGDIIDIWEMNKRVFWPQAHNNVIRTILGKAKHNTKVIYVPGNHDEILRDFDGAIFGNVEIKNETIHTTADGKKLLIIHGDEFDGVVKCSPLIAKIGSRLYDYLLRANRWVNLIRRKLGFPYWSLAAFLKHKVKNAVQYISNFEEAVAHEAARQKVDGVVCGHIHRAEITRLHDIDYFNCGDWVESCTALIERPDGSMEILKWT 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Match: A0A1Y5EZY2_9GAMM (UDP-2,3-diacylglucosamine hydrolase n=2 Tax=unclassified Methylophaga TaxID=2629249 RepID=A0A1Y5EZY2_9GAMM)

HSP 1 Score: 335 bits (860), Expect = 8.810e-114
Identity = 158/238 (66.39%), Postives = 187/238 (78.57%), Query Frame = 1 
Query:    4 RSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRYWPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKAVHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVRRALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIHRAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWS 717
            RSVW+SD+HLGFRGC+AD LL FL   EC+ LYLVGDIVD+W++KKR +WPQ HN+VIR ILGKAK  TKV+Y+PGNHDE LRDF G  FGN+ I  +AVHT  DG KLLILHGD+FD+ V  S  + K+GS  Y+ LL+ N +VN VRR LGF  WSLA +LK+KVKNAVQ ISNFE AVA  AA+ GV GVVCGHIHRAEI +IN I Y NCGDWVESCTAL+E  +G +EI+ W+
Sbjct:   14 RSVWISDIHLGFRGCSADYLLNFLHQVECDYLYLVGDIVDVWEMKKRMFWPQTHNNVIRTILGKAKHDTKVIYIPGNHDEVLRDFDGAVFGNVEIRNEAVHTTADGKKLLILHGDKFDSIVKVSPLIAKVGSRLYDYLLRANRLVNFVRRKLGFSYWSLAAFLKHKVKNAVQYISNFEEAVAHEAAQQGVDGVVCGHIHRAEITQINGIDYFNCGDWVESCTALIERADGSMEIIKWT 251
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92538.21401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351MEX9_9GAMM3.200e-12168.62UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Gammap... [more]
F5T2L5_9GAMM9.440e-11868.07Ser/Thr protein phosphatase family protein, UDP-2,... [more]
A0A0K2GJT6_NITMO1.020e-11564.85Ser/Thr protein phosphatase family protein, UDP-2,... [more]
A0A0S4KW64_9BACT1.850e-11565.69Ser/Thr protein phosphatase family protein, UDP-2,... [more]
C0N6A6_9GAMM3.640e-11568.07Ser/Thr protein phosphatase family protein n=3 Tax... [more]
A0A2A5BG75_9GAMM2.170e-11467.23UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Gammap... [more]
M7PTC5_9GAMM2.980e-11466.39UDP-2,3-diacylglucosamine hydrolase-like protein n... [more]
A0A1Y5DU42_9GAMM6.650e-11467.08UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Methyl... [more]
A0A7C1Z4H9_9GAMM8.510e-11465.97UDP-2,3-diacylglucosamine diphosphatase n=2 Tax=ro... [more]
A0A1Y5EZY2_9GAMM8.810e-11466.39UDP-2,3-diacylglucosamine hydrolase n=2 Tax=unclas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92538contigM-pyrifera_M_contig92538:38..763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score349.0
Seed ortholog evalue1.8e-93
Seed eggNOG ortholog1026882.MAMP_01480
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Calcineurin-like phosphoesterase superfamily domain
EggNOG OGs1MVKD@1224,1RQIA@1236,4605X@72273,COG2908@1,COG2908@2
COG Functional cat.S
Best tax levelThiotrichales
Best eggNOG OGNA|NA|NA
Exons1
Model size726
Cds size726
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816838.1137135-CDS-M-pyrifera_M_contig92538:37..7631622816838.1137135-CDS-M-pyrifera_M_contig92538:37..763Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92538 38..763 -
1692278208.1585903-CDS-M-pyrifera_M_contig92538:37..7631692278208.1585903-CDS-M-pyrifera_M_contig92538:37..763Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92538 38..763 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92538.21401.1prot_M-pyrifera_M_contig92538.21401.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92538 38..763 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92538.21401.1

>prot_M-pyrifera_M_contig92538.21401.1 ID=prot_M-pyrifera_M_contig92538.21401.1|Name=mRNA_M-pyrifera_M_contig92538.21401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
FRSVWVSDVHLGFRGCNADALLAFLKSTECETLYLVGDIVDIWQLKKRRY
WPQAHNDVIRAILGKAKVGTKVVYVPGNHDEFLRDFTGHAFGNIAIVEKA
VHTRVDGSKLLILHGDQFDAAVTSSRFLGKLGSFGYELLLQLNIVVNAVR
RALGFPRWSLAQYLKYKVKNAVQAISNFEHAVAQAAARHGVSGVVCGHIH
RAEIARINDIVYCNCGDWVESCTALVEHTNGELEILTWSHE*
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mRNA from alignment at M-pyrifera_M_contig92538:38..763-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92538.21401.1 ID=mRNA_M-pyrifera_M_contig92538.21401.1|Name=mRNA_M-pyrifera_M_contig92538.21401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig92538:38..763- (Macrocystis pyrifera P11B4 male)
TTTCGCAGCGTCTGGGTGTCGGATGTGCACCTCGGATTCCGGGGCTGCAA
TGCCGATGCGCTGCTGGCTTTTCTCAAGTCGACGGAATGCGAAACGCTTT
ACCTCGTCGGCGACATCGTCGACATCTGGCAACTGAAGAAGCGCCGTTAC
TGGCCGCAGGCTCACAACGACGTGATCCGTGCCATCCTCGGCAAGGCGAA
AGTCGGCACGAAAGTTGTCTACGTGCCCGGCAACCATGACGAGTTCCTGC
GTGACTTCACCGGCCACGCGTTCGGCAATATCGCGATCGTCGAGAAAGCG
GTCCATACGCGCGTCGACGGGTCGAAACTGCTGATTCTGCACGGTGATCA
GTTCGATGCCGCGGTCACGTCGTCACGGTTCCTCGGCAAGCTCGGGTCAT
TTGGTTACGAATTGCTGCTGCAGCTGAACATCGTCGTGAACGCGGTGCGG
CGCGCCCTCGGTTTCCCGCGCTGGTCGCTTGCACAGTACCTCAAGTACAA
GGTCAAGAACGCGGTGCAGGCCATCAGTAACTTCGAGCACGCGGTCGCCC
AGGCCGCGGCGCGTCACGGGGTGAGCGGGGTCGTGTGCGGGCATATCCAC
CGGGCCGAGATCGCCCGCATCAACGATATCGTCTACTGCAATTGCGGTGA
CTGGGTGGAGAGCTGCACGGCGCTCGTCGAGCATACGAACGGCGAACTCG
AAATCCTGACGTGGAGTCACGAATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92538:38..763-

>mRNA_M-pyrifera_M_contig92538.21401.1 ID=mRNA_M-pyrifera_M_contig92538.21401.1|Name=mRNA_M-pyrifera_M_contig92538.21401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig92538:38..763- (Macrocystis pyrifera P11B4 male)
TTTCGCAGCGTCTGGGTGTCGGATGTGCACCTCGGATTCCGGGGCTGCAA
TGCCGATGCGCTGCTGGCTTTTCTCAAGTCGACGGAATGCGAAACGCTTT
ACCTCGTCGGCGACATCGTCGACATCTGGCAACTGAAGAAGCGCCGTTAC
TGGCCGCAGGCTCACAACGACGTGATCCGTGCCATCCTCGGCAAGGCGAA
AGTCGGCACGAAAGTTGTCTACGTGCCCGGCAACCATGACGAGTTCCTGC
GTGACTTCACCGGCCACGCGTTCGGCAATATCGCGATCGTCGAGAAAGCG
GTCCATACGCGCGTCGACGGGTCGAAACTGCTGATTCTGCACGGTGATCA
GTTCGATGCCGCGGTCACGTCGTCACGGTTCCTCGGCAAGCTCGGGTCAT
TTGGTTACGAATTGCTGCTGCAGCTGAACATCGTCGTGAACGCGGTGCGG
CGCGCCCTCGGTTTCCCGCGCTGGTCGCTTGCACAGTACCTCAAGTACAA
GGTCAAGAACGCGGTGCAGGCCATCAGTAACTTCGAGCACGCGGTCGCCC
AGGCCGCGGCGCGTCACGGGGTGAGCGGGGTCGTGTGCGGGCATATCCAC
CGGGCCGAGATCGCCCGCATCAACGATATCGTCTACTGCAATTGCGGTGA
CTGGGTGGAGAGCTGCACGGCGCTCGTCGAGCATACGAACGGCGAACTCG
AAATCCTGACGTGGAGTCACGAATAGTTTCGCAGCGTCTGGGTGTCGGAT
GTGCACCTCGGATTCCGGGGCTGCAATGCCGATGCGCTGCTGGCTTTTCT
CAAGTCGACGGAATGCGAAACGCTTTACCTCGTCGGCGACATCGTCGACA
TCTGGCAACTGAAGAAGCGCCGTTACTGGCCGCAGGCTCACAACGACGTG
ATCCGTGCCATCCTCGGCAAGGCGAAAGTCGGCACGAAAGTTGTCTACGT
GCCCGGCAACCATGACGAGTTCCTGCGTGACTTCACCGGCCACGCGTTCG
GCAATATCGCGATCGTCGAGAAAGCGGTCCATACGCGCGTCGACGGGTCG
AAACTGCTGATTCTGCACGGTGATCAGTTCGATGCCGCGGTCACGTCGTC
ACGGTTCCTCGGCAAGCTCGGGTCATTTGGTTACGAATTGCTGCTGCAGC
TGAACATCGTCGTGAACGCGGTGCGGCGCGCCCTCGGTTTCCCGCGCTGG
TCGCTTGCACAGTACCTCAAGTACAAGGTCAAGAACGCGGTGCAGGCCAT
CAGTAACTTCGAGCACGCGGTCGCCCAGGCCGCGGCGCGTCACGGGGTGA
GCGGGGTCGTGTGCGGGCATATCCACCGGGCCGAGATCGCCCGCATCAAC
GATATCGTCTACTGCAATTGCGGTGACTGGGTGGAGAGCTGCACGGCGCT
CGTCGAGCATACGAACGGCGAACTCGAAATCCTGACGTGGAGTCACGAAT
AG
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