mRNA_M-pyrifera_M_contig92533.21400.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92533.21400.1
Unique NamemRNA_M-pyrifera_M_contig92533.21400.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A2R6WP05_MARPO (DNA helicase n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WP05_MARPO)

HSP 1 Score: 242 bits (617), Expect = 3.790e-70
Identity = 121/221 (54.75%), Postives = 152/221 (68.78%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            WSRRDFPW+  ++    R FG R FR NQ E+IN TMS +D FVLMPTGGGKSL YQL A+C PGVT+VISPLV+LI DQ+  L   NIPA +L   QD  +   + + LN    + K+LY+TPEK+++S+        L+++  L R+ +DEAHCVSQWG DFRPDYQ     K+ FP VP++ALTATAT  VK DV+Q LGLKD   F+ +FNR NL Y
Sbjct:  520 WSRRDFPWTRELEVNNRRYFGNRSFRPNQREIINATMSGRDVFVLMPTGGGKSLTYQLPAICQPGVTLVISPLVSLIMDQIMHLSEANIPAAYLSSSQDWTEQQRIMRELNKGQCEFKLLYVTPEKIAKSDSLCRNLENLYKRDLLNRIVVDEAHCVSQWGHDFRPDYQNLGVLKQRFPSVPLMALTATATMSVKEDVVQALGLKDCVIFRQTFNRPNLRY 740
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BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A1J3GLQ8_NOCCA (ATP-dependent DNA helicase (Fragment) n=4 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GLQ8_NOCCA)

HSP 1 Score: 237 bits (604), Expect = 1.800e-69
Identity = 121/221 (54.75%), Postives = 153/221 (69.23%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            WS R+FPW+  ++    +VFG   FR NQ E+IN TMS  D FVLMPTGGGKSL YQL A+  PG+T+VISPLV+LI DQ+  L  +NIPA  L  G +  + +++FQ L+  +S  ++LY+TPEKV++S+        L+ +G LAR  IDEAHCVSQWG DFRPDYQ     K+ FPD+PVLALTATAT  VK DV+Q LGL +   F+ SFNR NL Y
Sbjct:  118 WSSREFPWTRKLEVSNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMNLLQVNIPAASLSAGMEWAEQLKIFQELSSEHSKYRLLYVTPEKVARSDSLLRHLANLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPDIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWY 338
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BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A6P8CZS6_PUNGR (DNA helicase n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8CZS6_PUNGR)

HSP 1 Score: 238 bits (607), Expect = 6.830e-69
Identity = 123/221 (55.66%), Postives = 152/221 (68.78%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            WS R+FPW+  +++   +VFG   FR NQ E+IN TMS  D FVLMPTGGGKSL YQL A+  PGVT+VISPLV+LI DQ+  L   NIPAT+L   ++  +  E+F+ LN      K+LY+TPEKV++S+       RLH +  LAR+ IDEAHCVSQWG DFRPDYQ     K+ FP  PVLALTATAT  VK DV++ LGL +   F+ SFNR NLSY
Sbjct:  432 WSNRNFPWAKKLEDNNKKVFGNHSFRPNQREIINATMSGYDVFVLMPTGGGKSLTYQLPALICPGVTLVISPLVSLIQDQIMHLLQANIPATYLSAAKEWSEQQEIFRELNSDYCKFKLLYVTPEKVAKSDVLLRHLERLHARELLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPTTPVLALTATATASVKEDVVRALGLSNCIVFRQSFNRPNLSY 652
[Close]
BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: UPI00125CDF10 (ATP-dependent DNA helicase Q-like 4A n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00125CDF10)

HSP 1 Score: 237 bits (605), Expect = 1.300e-68
Identity = 123/221 (55.66%), Postives = 151/221 (68.33%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            WS RDFPW+  ++    +VFG   FR NQ EVIN +MS  D FVLMPTGGGKSL YQL A+ +PG+T+VISPLV+LI DQ+  L  +NIPAT+L    +  +  E+F+ LN      K+LY+TPEKV++S+       RLH    L+R+ IDEAHCVSQWG DFRPDYQ     K+ FP VPVLALTATAT  VK DV+Q LGL +   F+ SFNR NL Y
Sbjct:  434 WSSRDFPWTKKLEANNKKVFGNHSFRPNQREVINASMSGNDVFVLMPTGGGKSLTYQLPALISPGITLVISPLVSLIQDQIMHLLQVNIPATYLSASMEWAEQQEIFRELNSGVCKYKLLYVTPEKVAKSDVLLRHLERLHGSDSLSRIVIDEAHCVSQWGHDFRPDYQCLGILKQKFPSVPVLALTATATLSVKEDVVQALGLSNCVVFRQSFNRPNLRY 654
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BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A1J3HHD5_NOCCA (ATP-dependent DNA helicase Q-like 4B (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3HHD5_NOCCA)

HSP 1 Score: 223 bits (568), Expect = 1.500e-68
Identity = 116/218 (53.21%), Postives = 146/218 (66.97%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSN 651
            WS RDFPW+  ++    RVFG   FR NQ E+IN TMS  D FVLMPTGGGKSL YQL A+ + G+T+VISPL++LI DQ+  L   NI A  L  G +  + +E+ + ++  NS  K+LY+TPEKV++S+        L+    LAR  IDEAHCVSQWG DFRPDYQ     KK FP++P+LALTATAT  VK DV+Q LGL +   F+ SFNR N
Sbjct:  146 WSSRDFPWTKNLEVNNKRVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALISAGITLVISPLISLIQDQIMNLLQTNIHAASLSAGMEWAEQLEILREMSSGNSKYKLLYVTPEKVAKSDSLLRHLESLNSHSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKKKFPNIPMLALTATATASVKEDVVQALGLVNCAVFRQSFNRPN 363
[Close]
BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A2K3LIC1_TRIPR (ATP-dependent DNA helicase q-like 4a-like protein (Fragment) n=2 Tax=Trifolium TaxID=3898 RepID=A0A2K3LIC1_TRIPR)

HSP 1 Score: 224 bits (570), Expect = 2.190e-68
Identity = 118/219 (53.88%), Postives = 145/219 (66.21%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNL 654
            WS RDF W+  ++    RVFG   FR NQ EVIN TMS  D FVLMPTGGGKSL YQL A+  PG+T+VISPLV+LI DQ+  L   NIPA +L    +  +  ++ + LN      K+LY+TPEKV++S+        LH +  L+R+ IDEAHCVSQWG DFRPDYQ     K+ FP+ PVLALTATAT  VK DV+Q LGL +   F+ SFNR NL
Sbjct:  174 WSSRDFSWTKELEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWAEQQDILRELNSAYCKYKLLYVTPEKVARSDVLLRHLESLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVKEDVVQALGLVNCIVFRQSFNRPNL 392
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BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: UPI001CB97CA0 (ATP-dependent DNA helicase Q-like 4A n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB97CA0)

HSP 1 Score: 236 bits (603), Expect = 3.010e-68
Identity = 122/222 (54.95%), Postives = 154/222 (69.37%), Query Frame = 1 
Query:    1 SWSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            +WS+RDFPW+  ++    +VFG   FR NQ EVIN TMS KD FVLMPTGGGKSL YQL A+  PG+T+VISPLV+LI DQ+  L   NIPAT+L    +  +  E+ + +   + + K+LY+TPEKV++S++   +   LH +  LAR+ IDEAHCVSQWG DFRPDYQ     K+ FP VPVLALTATAT  VK DV+Q LGL D   F+ SFNR NL +
Sbjct:  524 NWSKRDFPWTKKLEIDNKKVFGNHSFRPNQREVINATMSGKDVFVLMPTGGGKSLTYQLPALICPGLTLVISPLVSLIQDQIMHLSQANIPATYLSANMEWTEQQEILRGICSDSCNYKLLYVTPEKVAKSDFLLRQLDNLHARELLARIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPKVPVLALTATATASVKEDVVQALGLVDCVIFRQSFNRPNLRF 745
[Close]
BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A6D2I3L5_9BRAS (DNA helicase n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A6D2I3L5_9BRAS)

HSP 1 Score: 236 bits (603), Expect = 3.370e-68
Identity = 121/221 (54.75%), Postives = 152/221 (68.78%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            WS R+FPW+  ++    +VFG   FR NQ E+IN TMS  D FVLMPTGGGKSL YQL A+  PG+T+VISPLV+LI DQ+  L   NIPA  L  G +  + +++FQ L+  +S  ++LY+TPEKV++S+        L+ +G LAR  IDEAHCVSQWG DFRPDYQ     K+ FPD+PVLALTATAT  VK DV+Q LGL +   F+ SFNR NL Y
Sbjct:  901 WSSREFPWTRKLEVSNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELSSEHSKYRLLYVTPEKVARSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPDIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWY 1121
[Close]
BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A6J0M2M3_RAPSA (ATP-dependent DNA helicase n=2 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0M2M3_RAPSA)

HSP 1 Score: 231 bits (590), Expect = 7.100e-68
Identity = 121/221 (54.75%), Postives = 150/221 (67.87%), Query Frame = 1 
Query:    4 WSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            WS RDF W+  ++    +VFG   FR NQ E+IN TMS  D FVLMPTGGGKSL YQL A+   G+T+VISPLV+LI DQ+  L   NIPA  L  G +  + +++FQ L+  +S  K+LY+TPEKV+QS+        L+ +G LAR  IDEAHCVSQWG DFRPDYQ     K+ FP++PVLALTATAT  VK DV+Q LGL +   F+ SFNR NL Y
Sbjct:   42 WSSRDFHWTRKLEVSNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICQGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWSEQLKIFQELSSEHSKYKLLYVTPEKVAQSDSLLRHLDNLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWY 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Match: A0A2J6K1I4_LACSA (DNA helicase n=5 Tax=Lactuca TaxID=4235 RepID=A0A2J6K1I4_LACSA)

HSP 1 Score: 234 bits (598), Expect = 1.070e-67
Identity = 121/222 (54.50%), Postives = 152/222 (68.47%), Query Frame = 1 
Query:    1 SWSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTGGGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD--DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAIDEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQLGLKDAQSFQTSFNRSNLSY 660
            +WS+RDFPW+  ++    +VFG   FR NQ EVIN TMS KD FVLMPTGGGKSL YQL A+  PG+T+VISPLV+LI DQ+  L   NIPA +L    +  +  E+ + L   N + K+LY+TPEKV++S++   +   +H +  L+R  IDEAHCVSQWG DFRPDYQ     K+ FP VPVLALTATAT  VK DV+Q LGL D   F+ SFNR NL +
Sbjct:  416 NWSKRDFPWTKEMEANNKKVFGNHSFRPNQREVINATMSGKDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAAYLSATMEWSEQQEILRELCSDNCNYKLLYVTPEKVAKSDFLLRQLENIHARELLSRFVIDEAHCVSQWGHDFRPDYQGLGILKQKFPTVPVLALTATATASVKEDVVQALGLVDCVIFRQSFNRPNLRF 637
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92533.21400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R6WP05_MARPO3.790e-7054.75DNA helicase n=1 Tax=Marchantia polymorpha TaxID=3... [more]
A0A1J3GLQ8_NOCCA1.800e-6954.75ATP-dependent DNA helicase (Fragment) n=4 Tax=Nocc... [more]
A0A6P8CZS6_PUNGR6.830e-6955.66DNA helicase n=4 Tax=Punica granatum TaxID=22663 R... [more]
UPI00125CDF101.300e-6855.66ATP-dependent DNA helicase Q-like 4A n=3 Tax=Ipomo... [more]
A0A1J3HHD5_NOCCA1.500e-6853.21ATP-dependent DNA helicase Q-like 4B (Fragment) n=... [more]
A0A2K3LIC1_TRIPR2.190e-6853.88ATP-dependent DNA helicase q-like 4a-like protein ... [more]
UPI001CB97CA03.010e-6854.95ATP-dependent DNA helicase Q-like 4A n=1 Tax=Erige... [more]
A0A6D2I3L5_9BRAS3.370e-6854.75DNA helicase n=2 Tax=Magnoliopsida TaxID=3398 RepI... [more]
A0A6J0M2M3_RAPSA7.100e-6854.75ATP-dependent DNA helicase n=2 Tax=Raphanus sativu... [more]
A0A2J6K1I4_LACSA1.070e-6754.50DNA helicase n=5 Tax=Lactuca TaxID=4235 RepID=A0A2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92533contigM-pyrifera_M_contig92533:5..664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score239.6
Seed ortholog evalue1.4e-60
Seed eggNOG ortholog3711.Bra018418.1-P
KEGG koko:K03654,ko:K10901
KEGG Pathwayko03018,ko03440,ko03460,map03018,map03440,map03460
KEGG ModuleM00295,M00414
Hectar predicted targeting categoryother localisation
GOsGO:0000724,GO:0000725,GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009266,GO:0009378,GO:0009409,GO:0009506,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009987,GO:0010033,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030054,GO:0032392,GO:0032508,GO:0032870,GO:0033554,GO:0033993,GO:0034641,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0055044,GO:0070035,GO:0070417,GO:0070887,GO:0071103,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097305,GO:0097306,GO:0140097,GO:1901360,GO:1901363,GO:1901700,GO:1901701
EggNOG free text desc.DNA helicase
EggNOG OGs37NQ4@33090,3GBMR@35493,3HPTT@3699,COG0514@1,KOG0351@2759
EC3.6.4.12
COG Functional cat.A
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Exons1
Model size660
Cds size660
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816838.0804458-CDS-M-pyrifera_M_contig92533:4..6641622816838.0804458-CDS-M-pyrifera_M_contig92533:4..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92533 5..664 -
1692278208.1465209-CDS-M-pyrifera_M_contig92533:4..6641692278208.1465209-CDS-M-pyrifera_M_contig92533:4..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92533 5..664 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92533.21400.1prot_M-pyrifera_M_contig92533.21400.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92533 5..664 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92533.21400.1

>prot_M-pyrifera_M_contig92533.21400.1 ID=prot_M-pyrifera_M_contig92533.21400.1|Name=mRNA_M-pyrifera_M_contig92533.21400.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
SWSRRDFPWSNTIQEVLIRVFGLRDFRQNQLEVINCTMSKKDAFVLMPTG
GGKSLIYQLSAVCTPGVTVVISPLVALISDQVSQLRVMNIPATFLGRGQD
DSMEVFQRLNDRNSDLKILYLTPEKVSQSNYTQDRPRRLHQQGRLARVAI
DEAHCVSQWGRDFRPDYQECSFFKKNFPDVPVLALTATATDKVKLDVIQQ
LGLKDAQSFQTSFNRSNLSY
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mRNA from alignment at M-pyrifera_M_contig92533:5..664-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92533.21400.1 ID=mRNA_M-pyrifera_M_contig92533.21400.1|Name=mRNA_M-pyrifera_M_contig92533.21400.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig92533:5..664- (Macrocystis pyrifera P11B4 male)
TCGTGGTCAAGGAGGGACTTCCCTTGGTCCAATACCATCCAAGAGGTGCT
GATCAGAGTGTTTGGACTGCGAGACTTCCGCCAGAACCAATTAGAGGTGA
TCAACTGCACCATGTCCAAGAAGGATGCCTTCGTCCTGATGCCCACTGGA
GGAGGCAAGAGTTTGATATACCAGCTCTCTGCTGTGTGTACCCCAGGCGT
CACTGTCGTGATCTCACCACTGGTGGCTCTCATCAGTGACCAGGTCAGCC
AGCTTCGAGTGATGAACATCCCGGCCACCTTTCTTGGCCGAGGCCAGGAC
GACTCAATGGAGGTGTTCCAACGACTCAACGACAGGAACAGTGACCTGAA
GATTCTCTATCTTACCCCCGAGAAGGTGAGCCAGAGCAATTACACCCAGG
ATCGCCCGCGACGCCTCCACCAGCAGGGCAGATTGGCCCGTGTAGCCATT
GACGAAGCCCACTGTGTGAGCCAGTGGGGCCGCGACTTCCGGCCTGACTA
TCAGGAATGCAGCTTCTTCAAGAAGAATTTCCCTGACGTTCCTGTGCTGG
CCCTCACAGCCACAGCCACAGACAAGGTCAAGCTGGACGTGATCCAGCAG
CTTGGCCTTAAAGATGCTCAGTCGTTCCAGACCTCTTTCAACAGATCCAA
CCTCAGCTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92533:5..664-

>mRNA_M-pyrifera_M_contig92533.21400.1 ID=mRNA_M-pyrifera_M_contig92533.21400.1|Name=mRNA_M-pyrifera_M_contig92533.21400.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig92533:5..664- (Macrocystis pyrifera P11B4 male)
TCGTGGTCAAGGAGGGACTTCCCTTGGTCCAATACCATCCAAGAGGTGCT
GATCAGAGTGTTTGGACTGCGAGACTTCCGCCAGAACCAATTAGAGGTGA
TCAACTGCACCATGTCCAAGAAGGATGCCTTCGTCCTGATGCCCACTGGA
GGAGGCAAGAGTTTGATATACCAGCTCTCTGCTGTGTGTACCCCAGGCGT
CACTGTCGTGATCTCACCACTGGTGGCTCTCATCAGTGACCAGGTCAGCC
AGCTTCGAGTGATGAACATCCCGGCCACCTTTCTTGGCCGAGGCCAGGAC
GACTCAATGGAGGTGTTCCAACGACTCAACGACAGGAACAGTGACCTGAA
GATTCTCTATCTTACCCCCGAGAAGGTGAGCCAGAGCAATTACACCCAGG
ATCGCCCGCGACGCCTCCACCAGCAGGGCAGATTGGCCCGTGTAGCCATT
GACGAAGCCCACTGTGTGAGCCAGTGGGGCCGCGACTTCCGGCCTGACTA
TCAGGAATGCAGCTTCTTCAAGAAGAATTTCCCTGACGTTCCTGTGCTGG
CCCTCACAGCCACAGCCACAGACAAGGTCAAGCTGGACGTGATCCAGCAG
CTTGGCCTTAAAGATGCTCAGTCGTTCCAGACCTCTTTCAACAGATCCAA
CCTCAGCTACTCGTGGTCAAGGAGGGACTTCCCTTGGTCCAATACCATCC
AAGAGGTGCTGATCAGAGTGTTTGGACTGCGAGACTTCCGCCAGAACCAA
TTAGAGGTGATCAACTGCACCATGTCCAAGAAGGATGCCTTCGTCCTGAT
GCCCACTGGAGGAGGCAAGAGTTTGATATACCAGCTCTCTGCTGTGTGTA
CCCCAGGCGTCACTGTCGTGATCTCACCACTGGTGGCTCTCATCAGTGAC
CAGGTCAGCCAGCTTCGAGTGATGAACATCCCGGCCACCTTTCTTGGCCG
AGGCCAGGACGACTCAATGGAGGTGTTCCAACGACTCAACGACAGGAACA
GTGACCTGAAGATTCTCTATCTTACCCCCGAGAAGGTGAGCCAGAGCAAT
TACACCCAGGATCGCCCGCGACGCCTCCACCAGCAGGGCAGATTGGCCCG
TGTAGCCATTGACGAAGCCCACTGTGTGAGCCAGTGGGGCCGCGACTTCC
GGCCTGACTATCAGGAATGCAGCTTCTTCAAGAAGAATTTCCCTGACGTT
CCTGTGCTGGCCCTCACAGCCACAGCCACAGACAAGGTCAAGCTGGACGT
GATCCAGCAGCTTGGCCTTAAAGATGCTCAGTCGTTCCAGACCTCTTTCA
ACAGATCCAACCTCAGCTAC
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