mRNA_M-pyrifera_M_contig92473.21393.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92473.21393.1
Unique NamemRNA_M-pyrifera_M_contig92473.21393.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: A0A5J4XKA3_9CHLO (E3 ubiquitin-ligase SHPRH n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XKA3_9CHLO)

HSP 1 Score: 189 bits (479), Expect = 2.410e-51
Identity = 108/241 (44.81%), Postives = 147/241 (61.00%), Query Frame = 1
Query:    1 AEHFADYDVVLTTYAVLRSDLYH-AKTQERSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFA---MGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEGSDSSKPLAGGDK----DIDKLLQSVLKLRQACCHPQV 699
            A   A  DVVLTTY VL+ D++H A   ++S   R  K     V+PTPL  L WWRVC+DEAQMV + T KAAEM  ++ A HRWC+TGTP+  +G  DL GLF+FL+    SE +W+ R    P +AG        +  LK   G + WR +KADV  +L LPPQ   T  L+F+ +E +FY++QH ECS    S ++ ++  S +++ LAG  +    +  KLL  +L+LRQACCHPQV
Sbjct:  591 AGDLAGADVVLTTYDVLKKDVHHLADPDQQSKTFRTRKRYE--VIPTPLTRLCWWRVCLDEAQMVESSTAKAAEMASKLAARHRWCITGTPLS-RGLEDLYGLFYFLKAAPLSEKFWWNRVCQRPYEAGSPAGRARLLTLLKPSQGGLLWRTAKADVAHELGLPPQHQHTSSLQFSAIERHFYSRQHAECSLRASSTISSQLL-SQAAQGLAGQRRLTAAEEKKLLFPLLRLRQACCHPQV 827          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: UPI00138FF624 (E3 ubiquitin-protein ligase SHPRH isoform X1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FF624)

HSP 1 Score: 188 bits (478), Expect = 3.310e-51
Identity = 104/233 (44.64%), Postives = 143/233 (61.37%), Query Frame = 1
Query:    4 EHFADYDVVLTTYAVLRSDLYHAKTQERS-LHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEGSDSSKPLAGGDKD-IDKLLQSVLKLRQACCHPQ 696
            E   D+D+VLTTYA LR+D YH    + S + SR+ K +    LP+PL  +K+WRVC+DEAQMV T T +AAEM + +   HRWCVTGTPIQ K   DL GL  FL    Y +  W+ + + LP   G        ++  L  + WR +K DV  ++QLPPQ +    L+F+PVE +FY +QHEECS+  R +L+     S+S   L+  DK+ +  +L  +L+LRQACCHPQ
Sbjct:  921 EVLGDHDIVLTTYATLRADFYHVGVNKGSAVRSRRHKRRYI-ALPSPLTMVKFWRVCLDEAQMVETTTARAAEMALNLQCVHRWCVTGTPIQ-KELEDLYGLLLFLGFYPYCQRIWWNKLLLLPYMVGHCKP----MENALAQVLWRTAKKDVLHEIQLPPQTEHVIPLKFSPVELHFYQRQHEECSSMARRMLS---RWSESETKLSSIDKNTVHAMLTPLLRLRQACCHPQ 1144          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: A7RSV8_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RSV8_NEMVE)

HSP 1 Score: 188 bits (477), Expect = 4.380e-51
Identity = 103/233 (44.21%), Postives = 143/233 (61.37%), Query Frame = 1
Query:    4 EHFADYDVVLTTYAVLRSDLYHAKTQE-RSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEGSDSSKPLAGGDKD-IDKLLQSVLKLRQACCHPQ 696
            E   D+D+VLTTYA LR+D YH    +  ++ SR+ K +    LP+PL  +K+WRVC+DEAQMV T T +AAEM + +   HRWCVTGTPIQ K   DL GL  FL    Y +  W+ + + LP   G        ++  L  + WR +K DV  ++QLPPQ +    L+F+PVE +FY +QHEECS+  R +L+     S+S   L+  DK+ +  +L  +L+LRQACCHPQ
Sbjct:  510 EVLGDHDIVLTTYATLRADFYHVGVNKGNAVRSRRHKRRYI-ALPSPLTMVKFWRVCLDEAQMVETTTARAAEMALNLQCVHRWCVTGTPIQ-KELEDLYGLLLFLGFYPYCQRIWWNKLLLLPYMVGHCKP----MENALAQVLWRTAKKDVLHEIQLPPQTEHVIPLKFSPVELHFYQRQHEECSSMARRMLS---RWSESETKLSSIDKNTVHAMLTPLLRLRQACCHPQ 733          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: A0A6P8J1W7_ACTTE (E3 ubiquitin-protein ligase SHPRH-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J1W7_ACTTE)

HSP 1 Score: 184 bits (468), Expect = 7.310e-50
Identity = 104/233 (44.64%), Postives = 142/233 (60.94%), Query Frame = 1
Query:    4 EHFADYDVVLTTYAVLRSDLYHAKTQE-RSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEGSDSSKPLAGGDKDIDKLLQSVLKLRQACCHPQV 699
            E  AD+DV+LTTYA LR+D  H  TQ+ RSL  +K        LP+PL A+K+WR+C+DEAQMV + T KAAEM +++   +RWCVTGTPIQ KG  DL GL  FL    Y +  W+ R +  P   G+ +         L DI WR +K +V  ++ LP Q ++  +L F PVE +FY +QHEECSA+   +L  +  GS   K  +     + ++L  +L+LRQACCHPQV
Sbjct: 1062 EMLADHDVILTTYATLRADFNHLGTQQGRSLRYQKRYM----ALPSPLTAIKFWRICLDEAQMVESTTAKAAEMALRLDCVNRWCVTGTPIQ-KGLEDLYGLLLFLGVFPYCQKIWWNRLLYEPYLRGNKEPMFD----ALADILWRTAKKNVLDEIHLPSQTEIVVRLNFTPVEEHFYRRQHEECSASIHVML--KRFGSQDVKLNSLDRNTVHRMLIPLLRLRQACCHPQV 1283          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: A0A803NY48_CANSA (Uncharacterized protein n=4 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NY48_CANSA)

HSP 1 Score: 182 bits (462), Expect = 4.590e-49
Identity = 99/237 (41.77%), Postives = 136/237 (57.38%), Query Frame = 1
Query:   22 DVVLTTYAVLRSDLYHAKTQERSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQ---AGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAG--------RMEGSDSSKPLAGGDKDIDKLLQSVLKLRQACCHPQV 699
            D+VLTTY  L+ DL H   +           +  PV+PT L  + WWRVC+DEAQMV +    A EM +++PA++RWC+TGTPIQ K   DL GL  FL+   +  S W+   +  P Q   AG I+F   F K+++    WR+SKA V  +LQLPPQ + T  L F+P+E +FY +QHE C+   + ++A          +  SD S        +  KLL ++LKLRQACCHPQV
Sbjct:  557 DIVLTTYDTLKEDLSHDSDRHEGDRRIMRFQKRYPVIPTYLTRIFWWRVCLDEAQMVESNATSATEMALRLPAKYRWCITGTPIQRK-LDDLYGLLRFLKASPFDVSRWWTEVMRDPYQRRDAGAIEFTHQFFKQIM----WRSSKAHVADELQLPPQEEYTSWLTFSPIEEHFYQRQHETCAIVAQEVIASLKDEILKRNVSASDGSSDPFITHAEAGKLLNTLLKLRQACCHPQV 788          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: UPI000D1CE002 (E3 ubiquitin-protein ligase SHPRH n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CE002)

HSP 1 Score: 181 bits (460), Expect = 8.360e-49
Identity = 101/233 (43.35%), Postives = 137/233 (58.80%), Query Frame = 1
Query:    1 AEHFADYDVVLTTYAVLRSDLYHAKTQERSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEGSDSSKPLAGGDKDIDKLLQSVLKLRQACCHPQV 699
            A   A  DVV+TTY VLR+DL H   +E     R  K     V+ TPL  LKWWR+C+DEAQMV + T KA EM +++ AE++WCV+GTPIQ +G  DL GL  FLQ   +    W+++ I  P + G +  A+ F      +I WR+ K DV  QL +PPQ +    L+F+ VE +FY +QHE+C    R ++     G    +PL     D  KL+  +L+LRQACCHPQV
Sbjct:  460 AHDLAAADVVITTYDVLRADLSHDIEEENQQTLRFEKKYH--VIATPLTRLKWWRICLDEAQMVESSTAKATEMAMRLHAENKWCVSGTPIQ-RGLDDLYGLLRFLQAEPFDNHTWWQQAIKHPYEKGKMG-AVNFAHSFFREIMWRSMKIDVIDQLDIPPQEERITWLKFSGVENHFYRQQHEQCVKRAREVIEKYSLGD--GRPL--NHMDASKLMNPLLRLRQACCHPQV 684          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: D8QVL3_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QVL3_SELML)

HSP 1 Score: 181 bits (460), Expect = 8.680e-49
Identity = 101/233 (43.35%), Postives = 137/233 (58.80%), Query Frame = 1
Query:    1 AEHFADYDVVLTTYAVLRSDLYHAKTQERSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEGSDSSKPLAGGDKDIDKLLQSVLKLRQACCHPQV 699
            A   A  DVV+TTY VLR+DL H   +E     R  K     V+ TPL  LKWWR+C+DEAQMV + T KA EM +++ AE++WCV+GTPIQ +G  DL GL  FLQ   +    W+++ I  P + G +  A+ F      +I WR+ K DV  QL +PPQ +    L+F+ VE +FY +QHE+C    R ++     G    +PL     D  KL+  +L+LRQACCHPQV
Sbjct:  304 AHDLAAADVVITTYDVLRADLSHDIEEENQQTLRFEKKYH--VIATPLTRLKWWRICLDEAQMVESSTAKATEMAMRLHAENKWCVSGTPIQ-RGLDDLYGLLRFLQAEPFDNHTWWQQAIKHPYEKGKMG-AVNFAHSFFREIMWRSMKIDVIDQLDIPPQEERITWLKFSGVENHFYRQQHEQCVKRAREVIEKYSLGD--GRPL--NHMDASKLMNPLLRLRQACCHPQV 528          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: T1JC89_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JC89_STRMM)

HSP 1 Score: 181 bits (458), Expect = 1.550e-48
Identity = 97/231 (41.99%), Postives = 144/231 (62.34%), Query Frame = 1
Query:   13 ADYDVVLTTYAVLRSDLYHAKTQERSLHSRKGKAQSTPVLP--TPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEGSDSSKPLAGGDKD-IDKLLQSVLKLRQACCHPQ 696
            ADYD+V+TTY +LR +L++      +  + +   +    +P  +PL A++WWR+C+DEAQMV T + + A+M +++ A +RWC+TGTPIQ K   DL GL  FL T  +S   W+R+C+  P   G+ +     + +VL  I WR SKADV  Q+QLP Q +  H +RF+P+E YFY +QH +CS   R  +    + SD +  L+  D++ +  LL  VL+LRQACCHPQ
Sbjct:  556 ADYDIVITTYEILRRELHYVDLPHSNSETGRRFRKPKRFMPVSSPLTAVEWWRICLDEAQMVETVSTRTADMALRLHAVNRWCITGTPIQ-KSIEDLYGLLLFLGTDPFSVRVWWRQCLFEPYCYGETEQ----MHRVLSSILWRTSKADVLNQIQLPEQREEIHYMRFSPIEEYFYRQQHVDCS---REAVNRFNKLSDLNMKLSSLDRNTLSHLLGPVLRLRQACCHPQ 778          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: A0A8J9SF73_9CHLO (Probable E3 ubiquitin-protein ligase SHPRH n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SF73_9CHLO)

HSP 1 Score: 181 bits (458), Expect = 1.550e-48
Identity = 104/245 (42.45%), Postives = 149/245 (60.82%), Query Frame = 1
Query:    1 AEHFADYDVVLTTYAVLRSDLYHAKTQERSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFA---MGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLL---------AGRMEGSDSSKPLAGGDKDIDKLLQSVLKLRQACCHPQV 699
            A  FA  D+VLTTY  L+ D+ + +   ++   R+ K     VLPTPL  L+W+R+C+DEAQ+V + T KAA + V I A+HRWC+TGTP+  +G  DL GLF+FL    YS+S W+   +  P  AG  +     M  L+   G +FWR SKADV  +L LPPQ+  T  L  + +E +FY +QH++C+A  R++L         AGR  G ++ + L   ++    LL+S+L+LRQACCHPQV
Sbjct:  393 ARDFAAADIVLTTYETLQKDV-NRQGNIKTYSFRQAKKYE--VLPTPLTRLRWFRICLDEAQLVESTTAKAARLAVNIEAQHRWCITGTPLS-RGLEDLYGLFYFLHARPYSDSSWWHEVLQRPYVAGCPEGRRRLMAQLRPAEGGLFWRTSKADVAHELALPPQSHRTTFLTLSAIERHFYMRQHQDCAAKARAVLPTELLTALEAGRA-GDEAFRRLTRAEEK--SLLESLLRLRQACCHPQV 630          
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Match: A0A200R3L2_9MAGN (SNF2-related n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R3L2_9MAGN)

HSP 1 Score: 180 bits (457), Expect = 2.150e-48
Identity = 100/237 (42.19%), Postives = 133/237 (56.12%), Query Frame = 1
Query:   22 DVVLTTYAVLRSDLYHAKTQERSLHSRKGKAQSTPVLPTPLLALKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLRGLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSKADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLL------AGRMEGSDSSKPLAGGD-----KDIDKLLQSVLKLRQACCHPQV 699
            D+VLTTY VL+ DL H   +           +  PV+PT L  + WWR+C+DEAQMV +    A EM +++ A++ WC+TGTPIQ +   DL GL  FL+   Y    W+   I  P +  D   AM F  K    I WR+SKADV  +LQLPPQ +    L F+P+EA+FY +QHE C +  R ++      A + +  DS      GD      +  KLL S+LKLRQACCHPQV
Sbjct:  565 DIVLTTYDVLKEDLSHDNDRHEGDRRIMRFKKRYPVIPTLLTRIFWWRICLDEAQMVESNAAAATEMALRLHAKYHWCITGTPIQRR-LDDLYGLLRFLKASPYEVHKWWSEVIRDPYERKDAG-AMQFAHKFFKQIMWRSSKADVADELQLPPQKECVSWLSFSPIEAHFYQRQHETCVSYAREVIQSFKDDAHKSKIQDSESSERSGDLILTHTEASKLLHSLLKLRQACCHPQV 799          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92473.21393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J4XKA3_9CHLO2.410e-5144.81E3 ubiquitin-ligase SHPRH n=1 Tax=Trebouxia sp. A1... [more]
UPI00138FF6243.310e-5144.64E3 ubiquitin-protein ligase SHPRH isoform X1 n=1 T... [more]
A7RSV8_NEMVE4.380e-5144.21Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A6P8J1W7_ACTTE7.310e-5044.64E3 ubiquitin-protein ligase SHPRH-like isoform X1 ... [more]
A0A803NY48_CANSA4.590e-4941.77Uncharacterized protein n=4 Tax=Cannabis sativa Ta... [more]
UPI000D1CE0028.360e-4943.35E3 ubiquitin-protein ligase SHPRH n=2 Tax=Selagine... [more]
D8QVL3_SELML8.680e-4943.35Uncharacterized protein n=2 Tax=Selaginella moelle... [more]
T1JC89_STRMM1.550e-4841.99Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
A0A8J9SF73_9CHLO1.550e-4842.45Probable E3 ubiquitin-protein ligase SHPRH n=1 Tax... [more]
A0A200R3L2_9MAGN2.150e-4842.19SNF2-related n=1 Tax=Macleaya cordata TaxID=56857 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92473contigM-pyrifera_M_contig92473:8..706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score191.4
Seed ortholog evalue4.6e-46
Seed eggNOG ortholog45351.EDO45527
Preferred nameSHPRH
KEGG koko:K15710
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0031625,GO:0031974,GO:0031981,GO:0032446,GO:0033554,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0061630,GO:0061659,GO:0070013,GO:0070647,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.protein polyubiquitination
EggNOG OGs38QEB@33154,3BHM0@33208,COG0553@1,KOG0298@2759
EC2.3.2.27
COG Functional cat.L
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Exons1
Model size699
Cds size699
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816837.8097885-CDS-M-pyrifera_M_contig92473:7..7061622816837.8097885-CDS-M-pyrifera_M_contig92473:7..706Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92473 8..706 -
1692278208.0226223-CDS-M-pyrifera_M_contig92473:7..7061692278208.0226223-CDS-M-pyrifera_M_contig92473:7..706Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92473 8..706 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92473.21393.1prot_M-pyrifera_M_contig92473.21393.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92473 8..706 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92473.21393.1

>prot_M-pyrifera_M_contig92473.21393.1 ID=prot_M-pyrifera_M_contig92473.21393.1|Name=mRNA_M-pyrifera_M_contig92473.21393.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp
AEHFADYDVVLTTYAVLRSDLYHAKTQERSLHSRKGKAQSTPVLPTPLLA
LKWWRVCMDEAQMVGTGTQKAAEMVVQIPAEHRWCVTGTPIQHKGAVDLR
GLFHFLQTPFYSESYWFRRCIGLPCQAGDIDFAMGFLKKVLGDIFWRNSK
ADVDTQLQLPPQADLTHKLRFAPVEAYFYNKQHEECSATTRSLLAGRMEG
SDSSKPLAGGDKDIDKLLQSVLKLRQACCHPQV
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mRNA from alignment at M-pyrifera_M_contig92473:8..706-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92473.21393.1 ID=mRNA_M-pyrifera_M_contig92473.21393.1|Name=mRNA_M-pyrifera_M_contig92473.21393.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=699bp|location=Sequence derived from alignment at M-pyrifera_M_contig92473:8..706- (Macrocystis pyrifera P11B4 male)
GCCGAGCATTTTGCCGACTACGATGTGGTGCTCACCACCTACGCTGTTCT GCGGTCGGACCTGTACCATGCCAAGACCCAAGAGCGCTCGCTGCACTCTC GAAAGGGCAAGGCCCAATCGACTCCTGTGCTCCCAACGCCTTTGTTAGCC TTGAAGTGGTGGAGGGTCTGCATGGACGAAGCACAGATGGTGGGCACTGG CACGCAGAAGGCAGCCGAGATGGTGGTCCAGATTCCTGCTGAGCACCGCT GGTGCGTCACTGGAACACCCATCCAACACAAGGGTGCTGTGGACCTGCGA GGACTGTTCCACTTCTTGCAGACGCCTTTCTACAGCGAGAGCTACTGGTT CCGCAGGTGCATTGGGTTGCCATGCCAGGCGGGCGACATTGACTTCGCCA TGGGATTCCTCAAGAAGGTGTTGGGAGACATTTTCTGGCGCAACAGCAAG GCCGATGTTGATACGCAACTTCAACTCCCTCCACAGGCTGATTTGACCCA CAAGCTCCGCTTTGCCCCAGTCGAGGCCTACTTCTACAATAAGCAGCACG AAGAGTGCTCTGCCACGACTCGCTCCCTCCTCGCTGGCCGCATGGAGGGC TCTGACTCGAGTAAGCCTCTGGCAGGGGGTGACAAGGACATTGACAAGCT CTTGCAGTCAGTCCTCAAGCTGCGCCAAGCCTGCTGCCATCCGCAAGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92473:8..706-

>mRNA_M-pyrifera_M_contig92473.21393.1 ID=mRNA_M-pyrifera_M_contig92473.21393.1|Name=mRNA_M-pyrifera_M_contig92473.21393.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1398bp|location=Sequence derived from alignment at M-pyrifera_M_contig92473:8..706- (Macrocystis pyrifera P11B4 male)
GCCGAGCATTTTGCCGACTACGATGTGGTGCTCACCACCTACGCTGTTCT
GCGGTCGGACCTGTACCATGCCAAGACCCAAGAGCGCTCGCTGCACTCTC
GAAAGGGCAAGGCCCAATCGACTCCTGTGCTCCCAACGCCTTTGTTAGCC
TTGAAGTGGTGGAGGGTCTGCATGGACGAAGCACAGATGGTGGGCACTGG
CACGCAGAAGGCAGCCGAGATGGTGGTCCAGATTCCTGCTGAGCACCGCT
GGTGCGTCACTGGAACACCCATCCAACACAAGGGTGCTGTGGACCTGCGA
GGACTGTTCCACTTCTTGCAGACGCCTTTCTACAGCGAGAGCTACTGGTT
CCGCAGGTGCATTGGGTTGCCATGCCAGGCGGGCGACATTGACTTCGCCA
TGGGATTCCTCAAGAAGGTGTTGGGAGACATTTTCTGGCGCAACAGCAAG
GCCGATGTTGATACGCAACTTCAACTCCCTCCACAGGCTGATTTGACCCA
CAAGCTCCGCTTTGCCCCAGTCGAGGCCTACTTCTACAATAAGCAGCACG
AAGAGTGCTCTGCCACGACTCGCTCCCTCCTCGCTGGCCGCATGGAGGGC
TCTGACTCGAGTAAGCCTCTGGCAGGGGGTGACAAGGACATTGACAAGCT
CTTGCAGTCAGTCCTCAAGCTGCGCCAAGCCTGCTGCCATCCGCAAGTTG
CCGAGCATTTTGCCGACTACGATGTGGTGCTCACCACCTACGCTGTTCTG
CGGTCGGACCTGTACCATGCCAAGACCCAAGAGCGCTCGCTGCACTCTCG
AAAGGGCAAGGCCCAATCGACTCCTGTGCTCCCAACGCCTTTGTTAGCCT
TGAAGTGGTGGAGGGTCTGCATGGACGAAGCACAGATGGTGGGCACTGGC
ACGCAGAAGGCAGCCGAGATGGTGGTCCAGATTCCTGCTGAGCACCGCTG
GTGCGTCACTGGAACACCCATCCAACACAAGGGTGCTGTGGACCTGCGAG
GACTGTTCCACTTCTTGCAGACGCCTTTCTACAGCGAGAGCTACTGGTTC
CGCAGGTGCATTGGGTTGCCATGCCAGGCGGGCGACATTGACTTCGCCAT
GGGATTCCTCAAGAAGGTGTTGGGAGACATTTTCTGGCGCAACAGCAAGG
CCGATGTTGATACGCAACTTCAACTCCCTCCACAGGCTGATTTGACCCAC
AAGCTCCGCTTTGCCCCAGTCGAGGCCTACTTCTACAATAAGCAGCACGA
AGAGTGCTCTGCCACGACTCGCTCCCTCCTCGCTGGCCGCATGGAGGGCT
CTGACTCGAGTAAGCCTCTGGCAGGGGGTGACAAGGACATTGACAAGCTC
TTGCAGTCAGTCCTCAAGCTGCGCCAAGCCTGCTGCCATCCGCAAGTT
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