mRNA_M-pyrifera_M_contig92377.21378.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: A0A7S4HYJ9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HYJ9_9EUKA) HSP 1 Score: 119 bits (297), Expect = 4.030e-30 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LFRG HQDAHEFLN+LLN+I E ++++ K + EG++ K K P G TFVH FEG+LTNETRCLCCE ITSRDE FLDLS+D+E+N+S+TH Sbjct: 104 LFRGLQHQDAHEFLNYLLNDIAETIESKRKTK-EGEEVK------------KDPHKNGNTFVHQYFEGLLTNETRCLCCENITSRDESFLDLSIDIEQNASVTH 194
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: UPI001CB832C6 (ubiquitin carboxyl-terminal hydrolase 46 isoform X3 n=2 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB832C6) HSP 1 Score: 112 bits (280), Expect = 1.030e-27 Identity = 59/104 (56.73%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN I ++LQ E K+E + K K N E K P T+VHD+F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 130 LFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNANEIEENSKPEP-----TWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 228
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: A0A2K5JZC2_COLAP (Ubiquitin specific peptidase 46 n=5 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K5JZC2_COLAP) HSP 1 Score: 108 bits (271), Expect = 1.330e-27 Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN I ++LQ E K+E + K K N +E A P T+VH++F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 105 LFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNG--NMNEPAENNKPEL---TWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 203
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: A0A444V6Y6_ACIRT (Ubiquitin carboxyl-terminal hydrolase 46 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444V6Y6_ACIRT) HSP 1 Score: 106 bits (265), Expect = 3.300e-27 Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 1 Query: 16 MHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 M QDAHEFLN+LLN + ++LQ E +E + K L+N S ++ + + T+VHD+F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 1 MQQDAHEFLNYLLNTVADILQEETTQEKQNGK----LKNGSTTSDAEESNKIEPTWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 95
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: A0A401PIV4_SCYTO (USP domain-containing protein n=5 Tax=Gnathostomata TaxID=7776 RepID=A0A401PIV4_SCYTO) HSP 1 Score: 110 bits (275), Expect = 6.760e-27 Identity = 58/104 (55.77%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN I ++LQ E K+E + K K N E K P T+VH++F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 101 LFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNANEVEENSKPDP-----TWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 199
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: UPI0007AC92A0 (ubiquitin carboxyl-terminal hydrolase 46-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007AC92A0) HSP 1 Score: 108 bits (269), Expect = 6.760e-27 Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRT--LGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN + ++LQ E K+E K+ R+ N + A P + T+VHD+F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 112 LFDNYMQQDAHEFLNYLLNTVADILQEEKKQE---KQNGRLKNNGTAIATDTEPEQNKVEPTWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 214
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: UPI00165997EC (ubiquitin carboxyl-terminal hydrolase 12 isoform X4 n=1 Tax=Halichoerus grypus TaxID=9711 RepID=UPI00165997EC) HSP 1 Score: 108 bits (271), Expect = 7.390e-27 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN I ++LQ E K+E K L N + + T T+VH++F+G LTNETRCL CETI+S+DE FLDLSVDVE+N+S+TH Sbjct: 27 LFDNYMQQDAHEFLNYLLNTIADILQEERKQE----KQNGRLPNGNIDSENNNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITH 126
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: UPI001A9CD76D (ubiquitin carboxyl-terminal hydrolase 46 isoform X2 n=1 Tax=Ictidomys tridecemlineatus TaxID=43179 RepID=UPI001A9CD76D) HSP 1 Score: 108 bits (271), Expect = 9.490e-27 Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN I ++LQ E K+E + K K N +E A P T+VH++F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 112 LFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNG--NMNEPAENNKPEL---TWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 210
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: UPI001403C5CD (ubiquitin carboxyl-terminal hydrolase 46 isoform X3 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403C5CD) HSP 1 Score: 110 bits (274), Expect = 1.030e-26 Identity = 58/104 (55.77%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN I ++LQ E K+E + K K N E K P T+VH++F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 112 LFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNANEIEENNKPDP-----TWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 210
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Match: UPI0003D0BEAA (ubiquitin carboxyl-terminal hydrolase 46 isoform X4 n=1 Tax=Rattus norvegicus TaxID=10116 RepID=UPI0003D0BEAA) HSP 1 Score: 108 bits (271), Expect = 1.060e-26 Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 1 LFRGNMHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRTLGGTFVHDVFEGVLTNETRCLCCETITSRDEGFLDLSVDVEENSSLTH 312 LF M QDAHEFLN+LLN I ++LQ E K+E + K K N +E A P T+VH++F+G LTNETRCL CET++S+DE FLDLSVDVE+N+S+TH Sbjct: 152 LFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNG--NMNEPAENSKPEL---TWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITH 250 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92377.21378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92377.21378.1 >prot_M-pyrifera_M_contig92377.21378.1 ID=prot_M-pyrifera_M_contig92377.21378.1|Name=mRNA_M-pyrifera_M_contig92377.21378.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp MHQDAHEFLNFLLNNIGEVLQAEHKKEWEGKKAKRMLENSSESAWKKYPRback to top mRNA from alignment at M-pyrifera_M_contig92377:211..765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92377.21378.1 ID=mRNA_M-pyrifera_M_contig92377.21378.1|Name=mRNA_M-pyrifera_M_contig92377.21378.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=555bp|location=Sequence derived from alignment at M-pyrifera_M_contig92377:211..765+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92377:211..765+ >mRNA_M-pyrifera_M_contig92377.21378.1 ID=mRNA_M-pyrifera_M_contig92377.21378.1|Name=mRNA_M-pyrifera_M_contig92377.21378.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig92377:211..765+ (Macrocystis pyrifera P11B4 male)back to top |