mRNA_M-pyrifera_M_contig92344.21376.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92344.21376.1
Unique NamemRNA_M-pyrifera_M_contig92344.21376.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 4.950e-72
Identity = 125/226 (55.31%), Postives = 154/226 (68.14%), Query Frame = 1
Query:   31 KNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMSGRGARDKR--TKHSPQEAGGGGSGGAESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            + K+GYWGY QFEEQV DVMDVLE + P+ Q++ EVDHS+GH K RED LHV NMNV++GGKQ+  RD+VM E CLGP +AKMY   G WST F EG     +D K  +G+ QT +            H+P++         ++    ++EGY GKAKG +Q LWERGW+ DGMST A VS + +++ VL  L DFKNER ALQHLVESRGHILL SPK HPEVAG
Sbjct:   65 RGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVCAPPPFFEWHAPRKD-------KKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAG 281          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5KJF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF8_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.330e-71
Identity = 128/229 (55.90%), Postives = 151/229 (65.94%), Query Frame = 1
Query:   37 KEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMS-GRGAR------DKRTKHSPQEAGGGGSGGAESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            K+GYWGY QFEEQV DVMDVLE + P+ Q++ EVDHS+GH K RED LHV NMNV++GGKQ+  RD+VM E CLGP +AKMY   G WST F EG     +D K  +G+ QT +   GA       D   K      G             ++EGY GKAKG +Q LWERGW+ DGMST A VS + +++ VL  L DFKNER ALQHLVESRGHILL SPK HPEVAG
Sbjct:   93 KDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKG------------KVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAG 307          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 1.940e-68
Identity = 136/289 (47.06%), Postives = 167/289 (57.79%), Query Frame = 1
Query:    1 TPGTRFLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMS-GRGA-----------RDKRTKHSPQEAGGGGSG---------------------GAESEIRV----------------------IREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            +PG RFL +GK K+GYWGY  FEEQV DV+DVLE + P+ Q++ EVDHS+GH K RED LHV NMNV++GGKQ+  RD+VM EGCLG  +AKMY   G WST F EG     +D K  +G+ QT +   GA           +DK+      + G  G                       G   ++ V                      ++EGY GKAKG +Q LWERGW+ DGMST A VS + +++ VL  L DFKNER ALQHLVESRGHILL SPK HPEVAG
Sbjct:  190 SPGLRFLEYGKGKDGYWGYDLFEEQVEDVVDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGLEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVNPFFEWDTPRKDKKNAKGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAG 476          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 8.640e-66
Identity = 135/275 (49.09%), Postives = 160/275 (58.18%), Query Frame = 1
Query:    1 TPGTRFLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAG----------------------------------HAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMS-GRGAR------DKRTKHSPQEAGGGGSGGAESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            +PG RFL +GK K+G WGY QFEEQV DVMDVLE + P+ Q++ EVDHS+G                                  H K RED LHV NMNV++GGKQ+  RD+VM EGCLGP +AKMY   G WST F EG     +D K  +G+ QT +   GA       D   K      G             ++EGY GKAKG +Q LWERGW+ DGMST A VS + +++ VL  L DFKNER ALQHLVESRGHILL SPK HPEVAG
Sbjct:  630 SPGLRFLEYGKGKDGCWGYDQFEEQVEDVMDVLEHIDPDKQIVFEVDHSSGPDAKPWTPVXXXXXXXXXXXXXXXXXXXXXXXXXHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGPEEAKMYFANGRWSTKFREGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDKKNAKG------------KVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAG 890          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 4.390e-61
Identity = 126/305 (41.31%), Postives = 165/305 (54.10%), Query Frame = 1
Query:    1 TPGTRFLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMSGRGA-------------------------------------------------------------------RDKRTKHSPQEAGGGGSG---GAESEIR-VIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            +PG  FL +GKNK+GYWGY +F+EQ+           P+ Q+++E+DHS+GH + RED LHVGNMNV+ GGKQ   RDT+M EGCLGP +AKMY++ G WST F EG      D+K K+G+ QT +                                                                       + KR  ++    G G  G   GA ++ R  I+EGY GKAKG KQ LWERGW+ +GM+ +  ++ EKN++ VL  L DF++ER ALQ+LVESRGHILLLSPK HPEVAG
Sbjct:  579 SPGLWFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKNGGKQTVLRDTIMTEGCLGPKEAKMYLSNGKWSTEFTEGA--EVYDMKLKVGDTQTSTFAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVRKAKRKSNAGAGVGAGDEGAADGAGTKPRDKIKEGYEGKAKGSKQYLWERGWWKEGMNASVGIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAG 881          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.520e-53
Identity = 112/265 (42.26%), Postives = 155/265 (58.49%), Query Frame = 1
Query:    4 PGTRFLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMSGRGARDKRTKHSPQEAGGGGSGGAESEIRVIREG--------------------------------YVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            P  RFL + KN++GY GY +F+EQ+ DV+DVL    P+ Q+++E+DHS+GH + RED LHVGNMNV++GGKQ+  RDTV+ E CLGP + KMY++ G WST F EG      D+K K+G+ QT +   A          +A G        +++V R+                                    KA+G KQ L ERGW+ +GM+ +  ++ EKNI+ VL  L   +++R ALQ+L ESRGHILLLSP +HPEVAG
Sbjct:  485 PDLRFLQYWKNRDGYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRDTVITEWCLGPEEGKMYLSNGKWSTEFPEGA--EVYDMKLKVGDTQTSTF--ADGSPPPFYEWDAPG-------KDVKVARKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAQGSKQSLGERGWWKEGMNASVGIADEKNIEKVLQALTALESKRTALQYLAESRGHILLLSP-YHPEVAG 737          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5L6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y6_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.610e-53
Identity = 106/225 (47.11%), Postives = 125/225 (55.56%), Query Frame = 1
Query:   16 FLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMSGRGARDKRTKHSPQEAGGGGSGGAESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHP 690
            FL +GK KEGYWGY QFEEQV DVMDVLE + P+ Q++ EVDH++GH K RED L++ NMNV++ GKQ+  RD+VM EGCLGP +AKMY   G WST F EG                                                              Q LWERGW+ DGMST A VS E +++ VL  L D KNER ALQ+LVESRGHILL SPK  P
Sbjct:  444 FLEYGKGKEGYWGYDQFEEQVEDVMDVLEHIDPDMQVVFEVDHASGHGKQREDGLYLSNMNVKYEGKQKVLRDSVMTEGCLGPEEAKMYFANGKWSTKFSEGAV------------------------------------------------------------QYLWERGWWKDGMSTRAGVSDEMHVEKVLQTLPDLKNERTALQYLVESRGHILLSSPKVSP 608          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 6.980e-53
Identity = 114/277 (41.16%), Postives = 146/277 (52.71%), Query Frame = 1
Query:    1 TPGTRFLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIE-------------------------------------------VDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMSGRGARDKRTKHSPQEAGGGGSGGAESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            +PG RFL +GKNK+GYWGY +F+EQ+           P+ Q+++E                                           +DHS+GH + RED LHVGNMNV++GGKQ+  RDTVM EGCLGP +AKMY++ G    +  +G  T     KP             RDK                       I+EGY GKAK  KQ LWERG + +GM+ +  +S EKN++ VL  L DF++ER ALQ+LVESRGHILLLSPK HPEVAG
Sbjct:  366 SPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNG---DVAADGAGT-----KP-------------RDK-----------------------IKEGYEGKAKDSKQYLWERGLWKEGMNASVGISDEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAG 598          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 7.020e-52
Identity = 129/390 (33.08%), Postives = 170/390 (43.59%), Query Frame = 1
Query:    1 TPGTRFLVHGKNKEGYWGYVQFEEQVVDVMDV--------------------------------------------------------------------------------------LEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMS---------------------GRGARDKRTKHSPQEAGGGGS--GGAESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAA-----------------------------------------------TVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            +PG RFL +G NK+GYWGY +F+EQ+ DV+DV                                                                                      L+   PN Q+++E+DHS+GH + RED LHVGNMNV++GGKQ+  RDTVM EGCLGP +AKMY++ G WST F EG      D+K K+G+ QT +                      R A+           G  G+  G     + +I+EGY GKAKG K+ LWERGW+ +GM+ +                                                 ++ EKN++ VL  L DF++ER ALQ+LVESRGHILLLSPK HPEVAG
Sbjct:  854 SPGLRFLQYGTNKDGYWGYDEFKEQIEDVLDVFDDFEPDMQVVVEIDHSSGHTRQREDGLHAGNMNVKYGGKQKGVHRGGRGLRXKMYISNGKWSTESTEGAEVYDMKLKVGDTXLDVLDVFEPNMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGA--EVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKRXXXXXXXXXXGDEGATDGAGTKPMDMIKEGYEGKAKGSKKYLWERGWWKEGMNASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADEKNVEKVLQALTDFESERTALQYLVESRGHILLLSPKCHPEVAG 1241          
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 7.610e-50
Identity = 111/234 (47.44%), Postives = 135/234 (57.69%), Query Frame = 1
Query:    1 TPGTRFLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSAGHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMWSTLFIEGVTTRTLDLKPKLGEVQTMSGRGARDKRTKHSPQEAGGGGSGGAESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGNLLDFKNERPALQHLVESRGHILLLSPKFHPEVAG 702
            +PG RFL +GK K+GYWGY QFEEQV DVMDVLE + P+ Q++ EVDHS+GH K RED LHV NMNV++GGKQ+  RD+VM E CLGP +AKMY   G WST F EG     +D K  +G+ QT +                           +      +   A  RK     RG    G    A VS + +++ VL  L DFK ER AL+HLVESRGHI L   K HPEVAG
Sbjct:  345 SPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTST-------------------------FAVGAPPPFFEWDAP-RKDTKNARGRSRKG----AGVSDDMHVEKVLHALPDFKIERTALEHLVESRGHIHL--SKCHPEVAG 544          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92344.21376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVH4_9PHAE4.950e-7255.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJF8_9PHAE1.330e-7155.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB9_9PHAE1.940e-6847.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L611_9PHAE8.640e-6649.09Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN6_9PHAE4.390e-6141.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5X3_9PHAE1.520e-5342.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6Y6_9PHAE1.610e-5347.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRV8_9PHAE6.980e-5341.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J4M4_9PHAE7.020e-5233.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KXL0_9PHAE7.610e-5047.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92344contigM-pyrifera_M_contig92344:1..762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score79.3
Seed ortholog evalue2.6e-12
Seed eggNOG ortholog85982.XP_007324155.1
Hectar predicted targeting categoryother localisation
EggNOG OGs22F53@155619,29JY0@1,2RT6R@2759,39VBJ@33154,3P12S@4751,3V3WY@5204
Best tax levelAgaricomycetes
Best eggNOG OGNA|NA|NA
Exons2
Model size702
Cds size702
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816836.7307377-CDS-M-pyrifera_M_contig92344:0..3251622816836.7307377-CDS-M-pyrifera_M_contig92344:0..325Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92344 1..325 -
1692278207.3215928-CDS-M-pyrifera_M_contig92344:0..3251692278207.3215928-CDS-M-pyrifera_M_contig92344:0..325Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92344 1..325 -
1622816836.741242-CDS-M-pyrifera_M_contig92344:385..7621622816836.741242-CDS-M-pyrifera_M_contig92344:385..762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92344 386..762 -
1692278207.3378768-CDS-M-pyrifera_M_contig92344:385..7621692278207.3378768-CDS-M-pyrifera_M_contig92344:385..762Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92344 386..762 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92344.21376.1prot_M-pyrifera_M_contig92344.21376.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92344 1..762 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92344.21376.1

>prot_M-pyrifera_M_contig92344.21376.1 ID=prot_M-pyrifera_M_contig92344.21376.1|Name=mRNA_M-pyrifera_M_contig92344.21376.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=234bp
TPGTRFLVHGKNKEGYWGYVQFEEQVVDVMDVLEALYPNHQLMIEVDHSA
GHAKYREDILHVGNMNVRFGGKQRAPRDTVMVEGCLGPGQAKMYVNRGMW
STLFIEGVTTRTLDLKPKLGEVQTMSGRGARDKRTKHSPQEAGGGGSGGA
ESEIRVIREGYVGKAKGRKQVLWERGWFLDGMSTAATVSPEKNIDIVLGN
LLDFKNERPALQHLVESRGHILLLSPKFHPEVAG
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mRNA from alignment at M-pyrifera_M_contig92344:1..762-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92344.21376.1 ID=mRNA_M-pyrifera_M_contig92344.21376.1|Name=mRNA_M-pyrifera_M_contig92344.21376.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig92344:1..762- (Macrocystis pyrifera P11B4 male)
ACTCCAGGGACGCGCTTTCTGGTGCACGGCAAGAATAAGGAAGGGTATTG GGGGTATGTCCAGTTCGAGGAGCAGGTAGTAGACGTGATGGACGTCCTCG AGGCCCTCTACCCAAACCACCAGTTGATGATCGAGGTGGACCACTCAGCA GGGCATGCCAAGTACCGAGAGGATATCCTGCACGTGGGAAACATGAACGT GAGGTTTGGAGGCAAGCAGAGGGCCCCGCGGGATACCGTCATGGTGGAAG GGTGCTTGGGCCCGGGGCAGGCGAAGATGTACGTCAACCGCGGCATGTGG AGCACGCTGTTCATCGAAGGGGTCACGACGAGGACGTTGGACCTGAAGCC CAAGTTGGGTGAGGTGCAGACCATGTCGTTTGGCCCGTACGCCCCGCCCC CGTTCTACGCATGTGACGCCCCAATCTCGGACGTAAGGGGAAGGGGGGCA CGTGACAAGCGGACCAAGCACTCCCCGCAGGAGGCAGGTGGTGGGGGCAG TGGAGGAGCCGAGTCCGAGATACGCGTTATCCGGGAGGGGTACGTTGGAA AAGCCAAAGGGAGGAAGCAGGTGCTCTGGGAGCGCGGGTGGTTCCTCGAC GGCATGTCAACGGCGGCGACCGTTTCGCCGGAGAAGAACATCGACATCGT TCTCGGCAACCTGCTCGACTTCAAGAACGAAAGACCAGCGCTGCAGCACT TGGTGGAGAGCCGCGGGCACATCTTGTTGCTTTCGCCGAAATTTCACCCG GAGGTGGCGGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92344:1..762-

>mRNA_M-pyrifera_M_contig92344.21376.1 ID=mRNA_M-pyrifera_M_contig92344.21376.1|Name=mRNA_M-pyrifera_M_contig92344.21376.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1404bp|location=Sequence derived from alignment at M-pyrifera_M_contig92344:1..762- (Macrocystis pyrifera P11B4 male)
ACTCCAGGGACGCGCTTTCTGGTGCACGGCAAGAATAAGGAAGGGTATTG
GGGGTATGTCCAGTTCGAGGAGCAGGTAGTAGACGTGATGGACGTCCTCG
AGGCCCTCTACCCAAACCACCAGTTGATGATCGAGGTGGACCACTCAGCA
GGGCATGCCAAGTACCGAGAGGATATCCTGCACGTGGGAAACATGAACGT
GAGGTTTGGAGGCAAGCAGAGGGCCCCGCGGGATACCGTCATGGTGGAAG
GGTGCTTGGGCCCGGGGCAGGCGAAGATGTACGTCAACCGCGGCATGTGG
AGCACGCTGTTCATCGAAGGGGTCACGACGAGGACGTTGGACCTGAAGCC
CAAGTTGGGTGAGGTGCAGACCATGTCACTCCAGGGACGCGCTTTCTGGT
GCACGGCAAGAATAAGGAAGGGTATTGGGGGTATGTCCAGTTCGAGGAGC
AGGTAGTAGACGTGATGGACGTCCTCGAGGCCCTCTACCCAAACCACCAG
TTGATGATCGAGGTGGACCACTCAGCAGGGCATGCCAAGTACCGAGAGGA
TATCCTGCACGTGGGAAACATGAACGTGAGGTTTGGAGGCAAGCAGAGGG
CCCCGCGGGATACCGTCATGGTGGAAGGGTGCTTGGGCCCGGGGCAGGCG
AAGATGTACGTCAACCGCGGCATGTGGAGCACGCTGTTCATCGAAGGGGT
CACGACGAGGACGTTGGACCTGAAGCCCAAGTTGGGTGAGGTGCAGACCA
TGTCGGGAAGGGGGGCACGTGACAAGCGGACCAAGCACTCCCCGCAGGAG
GCAGGTGGTGGGGGCAGTGGAGGAGCCGAGTCCGAGATACGCGTTATCCG
GGAGGGGTACGTTGGAAAAGCCAAAGGGAGGAAGCAGGTGCTCTGGGAGC
GCGGGTGGTTCCTCGACGGCATGTCAACGGCGGCGACCGTTTCGCCGGAG
AAGAACATCGACATCGTTCTCGGCAACCTGCTCGACTTCAAGAACGAAAG
ACCAGCGCTGCAGCACTTGGTGGAGAGCCGCGGGCACATCTTGTTGCTTT
CGCCGAAATTTCACCCGGAGGTGGCGGGAGGGAAGGGGGGCACGTGACAA
GCGGACCAAGCACTCCCCGCAGGAGGCAGGTGGTGGGGGCAGTGGAGGAG
CCGAGTCCGAGATACGCGTTATCCGGGAGGGGTACGTTGGAAAAGCCAAA
GGGAGGAAGCAGGTGCTCTGGGAGCGCGGGTGGTTCCTCGACGGCATGTC
AACGGCGGCGACCGTTTCGCCGGAGAAGAACATCGACATCGTTCTCGGCA
ACCTGCTCGACTTCAAGAACGAAAGACCAGCGCTGCAGCACTTGGTGGAG
AGCCGCGGGCACATCTTGTTGCTTTCGCCGAAATTTCACCCGGAGGTGGC
GGGA
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