mRNA_M-pyrifera_M_contig92321.21367.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92321.21367.1
Unique NamemRNA_M-pyrifera_M_contig92321.21367.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A0A517VRQ7_9PLAN (Flagellar biosynthesis protein FlhA n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VRQ7_9PLAN)

HSP 1 Score: 429 bits (1103), Expect = 2.720e-144
Identity = 235/254 (92.52%), Postives = 244/254 (96.06%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            LVIIAPLPP +MD LLSCNITVSVVIL+TTIYV RPLEFSVFPAILLGTTLARLVLNVA+TRLIL  GA DGTAAAGGVIEAFGQFVAGGHLVVGLI+FVILVTIQFMVITKGATRISEVAARF+LDSMPGKQMAIDADLNAGLISSEEAK RR E+TEQADFYG+MDGASKFVRGDSIASIII LINVVGGLYVGMVDHGME+ KAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDS+LPRDVVKQF
Sbjct:   30 LVIIAPLPPFVMDFLLSCNITVSVVILLTTIYVKRPLEFSVFPAILLGTTLARLVLNVASTRLILLNGASDGTAAAGGVIEAFGQFVAGGHLVVGLILFVILVTIQFMVITKGATRISEVAARFALDSMPGKQMAIDADLNAGLISSEEAKARRMEVTEQADFYGAMDGASKFVRGDSIASIIIILINVVGGLYVGMVDHGMEMGKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSDLPRDVVKQF 283
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A6C931_9PLAN (Flagellar biosynthesis protein FlhA n=23 Tax=Planctomycetaceae TaxID=126 RepID=A6C931_9PLAN)

HSP 1 Score: 419 bits (1077), Expect = 7.040e-141
Identity = 232/243 (95.47%), Postives = 235/243 (96.71%), Query Frame = 1 
Query:   34 MDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            MD LLSCNITVSVVILMTTIYV RPLEFSVFPAILLGTTLARLVLNVA+TRLILTRGA DGTAAAGGVIEAFG FVAGG LVVGLIIFVILVTIQFMVITKGATRISEVAARF+LDSMPGKQMAIDADLNAGLISS+EAKTRR EITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAA VFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLP DVVKQF
Sbjct:    1 MDFLLSCNITVSVVILMTTIYVKRPLEFSVFPAILLGTTLARLVLNVASTRLILTRGAADGTAAAGGVIEAFGHFVAGGQLVVGLIIFVILVTIQFMVITKGATRISEVAARFALDSMPGKQMAIDADLNAGLISSDEAKTRRSEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAATVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPGDVVKQF 243
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A0A517TEG6_9PLAN (Flagellar biosynthesis protein FlhA n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517TEG6_9PLAN)

HSP 1 Score: 393 bits (1009), Expect = 2.640e-130
Identity = 207/253 (81.82%), Postives = 238/253 (94.07%), Query Frame = 1 
Query:    4 VIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            VI+APLP ++MDLLL+CN+T+ VVIL+TT+YV+RPLEFSVFPAILLGTTL+RLVLNVA+TRLILTRGA DGT+AAGGVIEAFG FV+G +LVVGLI+F+IL+ IQF+VITKGATRISEVAARF+LD MPGKQMAIDADLNAGLISSE+AKTRR+E+  QADFYG+MDGASKFVRGD+IASI+ITLIN+VGGLY+GMV++GM +S AA VFTTLTIGDGLVTQVPGFLISLAAGLIVTRTS DSNLP+DVV Q 
Sbjct:   26 VIVAPLPAVLMDLLLACNVTIGVVILLTTVYVSRPLEFSVFPAILLGTTLSRLVLNVASTRLILTRGASDGTSAAGGVIEAFGSFVSGENLVVGLILFIILIAIQFLVITKGATRISEVAARFALDGMPGKQMAIDADLNAGLISSEQAKTRREEVASQADFYGAMDGASKFVRGDAIASIVITLINIVGGLYIGMVENGMNVSDAARVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSSDSNLPKDVVGQL 278
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A0A518CGN2_9PLAN (Flagellar biosynthesis protein FlhA n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CGN2_9PLAN)

HSP 1 Score: 380 bits (977), Expect = 2.690e-125
Identity = 198/254 (77.95%), Postives = 235/254 (92.52%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            LVIIAPLPP+++DLLL+CN+T++V+ILMTT+YV+RPLEFSVFPAILLG+TLARLVLNVA+TRLIL  GA  GT AAGGVI+AFG FVAG ++V+GLI+FVILV IQF+VITKGATRISEVAARF+LD MPGKQMAIDADLNAGLI +E+AK RR+E+T QADFYG+MDGASKFVRGDSIASI+IT+IN++GGLY+GM+++GM+ S AA +FT LTIGDGLVTQVP FLISLAAGLIVTRTS +SNLPRDV++Q 
Sbjct:   30 LVIIAPLPPLVLDLLLACNVTIAVLILMTTVYVSRPLEFSVFPAILLGSTLARLVLNVASTRLILMNGASSGTEAAGGVIQAFGAFVAGDNIVIGLILFVILVAIQFLVITKGATRISEVAARFALDGMPGKQMAIDADLNAGLIDAEQAKKRREEVTHQADFYGAMDGASKFVRGDSIASIVITVINILGGLYIGMMENGMDFSSAAQIFTNLTIGDGLVTQVPAFLISLAAGLIVTRTSTESNLPRDVIQQM 283
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A0A517QVU0_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517QVU0_9BACT)

HSP 1 Score: 380 bits (975), Expect = 3.300e-125
Identity = 202/254 (79.53%), Postives = 231/254 (90.94%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            LVI+APLPP++MD+LL+CN+T+ V+IL+TTIYV +PLEFSVFPAILLGTTL RLVLNVA+TRLIL+RGA DGT AAGGVIEAFG FV  G+L VG+I+FVIL+ IQF+VITKGATRISEVAARF+LD MPGKQMAIDADLNAGLI+SE+AK+RR+EIT QADFYGSMDGASKFVRGD+IASI+ITLIN+ GG YVGMV++GM  S AA VFTTLTIGDGLVTQVPGFLISLAA L+VTRTS  SNLP+DVV Q 
Sbjct:   25 LVIVAPLPPVLMDMLLACNVTIGVLILLTTIYVAKPLEFSVFPAILLGTTLVRLVLNVASTRLILSRGATDGTNAAGGVIEAFGSFVTSGNLAVGVILFVILIAIQFLVITKGATRISEVAARFALDGMPGKQMAIDADLNAGLITSEQAKSRREEITSQADFYGSMDGASKFVRGDAIASIVITLINIAGGFYVGMVENGMNASDAARVFTTLTIGDGLVTQVPGFLISLAAALVVTRTSSASNLPQDVVGQM 278
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A0A2E0SNJ7_9PLAN (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SNJ7_9PLAN)

HSP 1 Score: 377 bits (969), Expect = 2.560e-124
Identity = 198/254 (77.95%), Postives = 234/254 (92.13%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            LVIIAPLPP+++DLLL+CN+T++V+ILMTT+YV RPLEFSVFPAILLG+TLARLVLNVA+TRLIL  GA+ GT AAGGVI+AFG FVAG ++V+GLI+FVILV IQF+VITKGATRISEVAARF+LD MPGKQMAIDADLNAGLI + +AK RR+E+T QADFYG+MDGASKFVRGDSIASI+ITLIN+VGGLY+GM+++GM+   AA +FTTLTIGDGLVTQVP FLISLAAGLIVTRTS +S+LPRDV++Q 
Sbjct:   17 LVIIAPLPPVILDLLLACNVTIAVMILMTTVYVGRPLEFSVFPAILLGSTLARLVLNVASTRLILMNGANSGTEAAGGVIQAFGAFVAGDNIVIGLILFVILVAIQFLVITKGATRISEVAARFALDGMPGKQMAIDADLNAGLIDAAQAKQRREEVTHQADFYGAMDGASKFVRGDSIASIVITLINIVGGLYIGMMENGMDFGAAAQIFTTLTIGDGLVTQVPAFLISLAAGLIVTRTSTESDLPRDVIQQM 270
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: F0SPR2_RUBBR (Flagellar biosynthesis protein FlhA n=2 Tax=Rubinisphaera TaxID=1649490 RepID=F0SPR2_RUBBR)

HSP 1 Score: 372 bits (956), Expect = 5.090e-122
Identity = 199/254 (78.35%), Postives = 228/254 (89.76%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            LVIIAPLPP+MMDLLL+CN+TV+V+IL+TTI+VT PLEFSVFPAILLGTTL+RLVLNVA+TRLILT  A  GT AAGGVI AFG+FVAGG   VG+IIF+IL+ IQF+VITKGATRISEVAARF+LD MPGKQMAIDADLNAGLIS+E+AK RR EI++QADFYG+MDGASKFVRGD+IA I+IT+IN++GGLY+G+V  GM    A  +FTTLTIGDGLVTQVP FLISLAAGLIVTRTSVDSNLP DVV+Q 
Sbjct:   29 LVIIAPLPPLMMDLLLACNVTVAVIILLTTIHVTNPLEFSVFPAILLGTTLSRLVLNVASTRLILTGAATRGTEAAGGVIAAFGEFVAGGSAAVGVIIFIILIAIQFLVITKGATRISEVAARFALDGMPGKQMAIDADLNAGLISAEQAKARRAEISQQADFYGAMDGASKFVRGDAIAGIVITVINILGGLYIGIVQEGMSFMDAVNIFTTLTIGDGLVTQVPAFLISLAAGLIVTRTSVDSNLPADVVEQL 282
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: UPI001EE90D37 (flagellar biosynthesis protein FlhA n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE90D37)

HSP 1 Score: 367 bits (943), Expect = 3.560e-120
Identity = 197/254 (77.56%), Postives = 226/254 (88.98%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            LVI+AP+PP+MMD+LL+CNIT++V+IL+TTI+V  PLEFSVFPAILLGTTL+RLVLNVA+TRLILT  A  GT AAGGVI AFG FVAGG   VG+IIFVIL+ IQF+VITKGATRISEVAARF+LD MPGKQMAIDADLNAGLI+SE+AK RR+EI++QADFYG+MDGASKFVRGD+IASI+IT+IN++GG YVGMV  GM    A  VFTTLTIGDGLVTQVP FLISLAAGLIVTRTS+DSNLP D+V Q 
Sbjct:   22 LVIVAPMPPIMMDMLLACNITLAVIILLTTIHVQNPLEFSVFPAILLGTTLSRLVLNVASTRLILTGAATQGTEAAGGVIAAFGGFVAGGSPTVGVIIFVILIAIQFLVITKGATRISEVAARFALDGMPGKQMAIDADLNAGLITSEQAKARREEISQQADFYGAMDGASKFVRGDAIASIVITIINIIGGFYVGMVQEGMAFGDAISVFTTLTIGDGLVTQVPAFLISLAAGLIVTRTSIDSNLPGDMVGQL 275
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A0A7W0M5I0_9PLAN (Flagellar biosynthesis protein FlhA n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0M5I0_9PLAN)

HSP 1 Score: 367 bits (943), Expect = 4.170e-120
Identity = 195/253 (77.08%), Postives = 231/253 (91.30%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQ 759
            LVI+ PLP  +MDLLL+ N+T +VVIL+TTIYV +PL+FSVFP+ILLGTTL+RLVLNVA+TRLILTRGA DGTAAAGGVIEAFG FV+G  LVVGLI+FVILV IQF+VITKGATRISEVAARF+LD MPGKQMAIDADLNAGL+++E+AK RRQE+++QADFYG+MDGASKFVRGD+IA I+IT+INV+GGLY+GMV+ GM +++AA VFTTLTIGDGLV+QVPGFLISLAA L+VTRTS DS L +DV+ Q
Sbjct:   28 LVIVTPLPAAIMDLLLAANVTAAVVILLTTIYVNKPLDFSVFPSILLGTTLSRLVLNVASTRLILTRGATDGTAAAGGVIEAFGNFVSGDSLVVGLILFVILVAIQFLVITKGATRISEVAARFALDGMPGKQMAIDADLNAGLVTAEQAKIRRQEVSQQADFYGAMDGASKFVRGDAIAGIVITVINVLGGLYIGMVEQGMPVAQAAKVFTTLTIGDGLVSQVPGFLISLAAALLVTRTSADSELSKDVIGQ 280
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BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Match: A0A3D4P8Z0_9PLAN (EscV/YscV/HrcV family type III secretion system export apparatus protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D4P8Z0_9PLAN)

HSP 1 Score: 351 bits (901), Expect = 2.300e-119
Identity = 191/254 (75.20%), Postives = 217/254 (85.43%), Query Frame = 1 
Query:    1 LVIIAPLPPMMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVATTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMVITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITEQADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAALVFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF 762
            LVI+APLPP+MMD+LL+CNIT++V+IL+TTI+V  PLEFSVFPA+LLGTTL+RLVLNVA+           GT AAGGVI+AFG+FVAGG   +G+IIFVILV IQF+VITKGATRISEV ARF+LD MPGKQMAIDADLNAGLI+SE+AK RR  I++QADFYG+MDGASKFVRGDSIA I+ITLIN+ GGLY+GMV  GM    A  VFTTLTIGDGLVTQVP FLISLAAGLIVTRTSVDSNLP DVV Q 
Sbjct:   29 LVIVAPLPPIMMDMLLACNITLAVIILLTTIHVRNPLEFSVFPALLLGTTLSRLVLNVASXXXXXXXXXXRGTEAAGGVIQAFGEFVAGGSPAIGVIIFVILVAIQFLVITKGATRISEVGARFALDGMPGKQMAIDADLNAGLITSEQAKARRDIISQQADFYGAMDGASKFVRGDSIARIVITLINIAGGLYIGMVQEGMPFMDAINVFTTLTIGDGLVTQVPAFLISLAAGLIVTRTSVDSNLPTDVVSQL 282
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92321.21367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517VRQ7_9PLAN2.720e-14492.52Flagellar biosynthesis protein FlhA n=1 Tax=Gimesi... [more]
A6C931_9PLAN7.040e-14195.47Flagellar biosynthesis protein FlhA n=23 Tax=Planc... [more]
A0A517TEG6_9PLAN2.640e-13081.82Flagellar biosynthesis protein FlhA n=1 Tax=Calyco... [more]
A0A518CGN2_9PLAN2.690e-12577.95Flagellar biosynthesis protein FlhA n=1 Tax=Polyst... [more]
A0A517QVU0_9BACT3.300e-12579.53Flagellar biosynthesis protein FlhA n=1 Tax=Planct... [more]
A0A2E0SNJ7_9PLAN2.560e-12477.95Flagellar biosynthesis protein FlhA n=1 Tax=Planct... [more]
F0SPR2_RUBBR5.090e-12278.35Flagellar biosynthesis protein FlhA n=2 Tax=Rubini... [more]
UPI001EE90D373.560e-12077.56flagellar biosynthesis protein FlhA n=1 Tax=Rubini... [more]
A0A7W0M5I0_9PLAN4.170e-12077.08Flagellar biosynthesis protein FlhA n=1 Tax=Planct... [more]
A0A3D4P8Z0_9PLAN2.300e-11975.20EscV/YscV/HrcV family type III secretion system ex... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92321contigM-pyrifera_M_contig92321:3..764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score422.2
Seed ortholog evalue1.7e-115
Seed eggNOG ortholog344747.PM8797T_14676
Preferred nameflhA
KEGG koko:K02400
KEGG TC3.A.6.2,3.A.6.3
KEGG Pathwayko02040,map02040
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EggNOG OGs2IXQ9@203682,COG1298@1,COG1298@2
COG Functional cat.N
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02035,ko02044
Exons1
Model size762
Cds size735
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816836.363154-UTR-M-pyrifera_M_contig92321:2..291622816836.363154-UTR-M-pyrifera_M_contig92321:2..29Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92321 3..29 +
1692278207.133397-UTR-M-pyrifera_M_contig92321:2..291692278207.133397-UTR-M-pyrifera_M_contig92321:2..29Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig92321 3..29 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816836.3743522-CDS-M-pyrifera_M_contig92321:29..7641622816836.3743522-CDS-M-pyrifera_M_contig92321:29..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92321 30..764 +
1692278207.1501346-CDS-M-pyrifera_M_contig92321:29..7641692278207.1501346-CDS-M-pyrifera_M_contig92321:29..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92321 30..764 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92321.21367.1prot_M-pyrifera_M_contig92321.21367.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92321 30..764 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92321.21367.1

>prot_M-pyrifera_M_contig92321.21367.1 ID=prot_M-pyrifera_M_contig92321.21367.1|Name=mRNA_M-pyrifera_M_contig92321.21367.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
MMMDLLLSCNITVSVVILMTTIYVTRPLEFSVFPAILLGTTLARLVLNVA
TTRLILTRGADDGTAAAGGVIEAFGQFVAGGHLVVGLIIFVILVTIQFMV
ITKGATRISEVAARFSLDSMPGKQMAIDADLNAGLISSEEAKTRRQEITE
QADFYGSMDGASKFVRGDSIASIIITLINVVGGLYVGMVDHGMELSKAAL
VFTTLTIGDGLVTQVPGFLISLAAGLIVTRTSVDSNLPRDVVKQF
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mRNA from alignment at M-pyrifera_M_contig92321:3..764+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92321.21367.1 ID=mRNA_M-pyrifera_M_contig92321.21367.1|Name=mRNA_M-pyrifera_M_contig92321.21367.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig92321:3..764+ (Macrocystis pyrifera P11B4 male)
CTGGTGATCATTGCGCCTCTGCCTCCGATGATGATGGACCTGCTCTTGTC
ATGCAATATCACTGTTTCCGTAGTGATTTTGATGACCACGATTTACGTCA
CACGCCCGCTGGAATTCAGCGTGTTCCCGGCGATCCTGCTGGGTACCACT
CTGGCGCGGCTGGTGTTGAACGTAGCGACCACCCGTCTGATCTTAACCCG
CGGAGCCGATGATGGTACCGCAGCGGCAGGCGGCGTGATTGAAGCCTTTG
GTCAGTTCGTGGCAGGTGGTCATCTGGTTGTGGGTCTGATTATCTTCGTG
ATCCTGGTCACGATTCAGTTTATGGTGATTACCAAGGGTGCGACACGTAT
CAGTGAAGTGGCCGCCCGGTTCTCACTCGACAGTATGCCTGGTAAACAAA
TGGCCATTGATGCCGACCTGAATGCCGGGTTGATCTCCTCAGAAGAAGCG
AAAACCCGTCGCCAGGAAATCACCGAACAGGCTGACTTCTACGGTTCAAT
GGACGGTGCCAGTAAGTTTGTCCGTGGGGACTCGATTGCCAGTATCATCA
TCACGCTGATCAACGTTGTCGGCGGTCTGTATGTGGGTATGGTAGACCAC
GGCATGGAGCTGTCGAAAGCAGCACTCGTGTTTACCACCCTGACGATCGG
CGATGGTCTGGTGACTCAGGTGCCGGGCTTTTTGATCTCACTCGCCGCTG
GTTTGATCGTTACCCGAACTTCAGTCGACAGTAACCTCCCCCGGGACGTC
GTTAAACAGTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92321:3..764+

>mRNA_M-pyrifera_M_contig92321.21367.1 ID=mRNA_M-pyrifera_M_contig92321.21367.1|Name=mRNA_M-pyrifera_M_contig92321.21367.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig92321:3..764+ (Macrocystis pyrifera P11B4 male)
ATGATGATGGACCTGCTCTTGTCATGCAATATCACTGTTTCCGTAGTGAT
TTTGATGACCACGATTTACGTCACACGCCCGCTGGAATTCAGCGTGTTCC
CGGCGATCCTGCTGGGTACCACTCTGGCGCGGCTGGTGTTGAACGTAGCG
ACCACCCGTCTGATCTTAACCCGCGGAGCCGATGATGGTACCGCAGCGGC
AGGCGGCGTGATTGAAGCCTTTGGTCAGTTCGTGGCAGGTGGTCATCTGG
TTGTGGGTCTGATTATCTTCGTGATCCTGGTCACGATTCAGTTTATGGTG
ATTACCAAGGGTGCGACACGTATCAGTGAAGTGGCCGCCCGGTTCTCACT
CGACAGTATGCCTGGTAAACAAATGGCCATTGATGCCGACCTGAATGCCG
GGTTGATCTCCTCAGAAGAAGCGAAAACCCGTCGCCAGGAAATCACCGAA
CAGGCTGACTTCTACGGTTCAATGGACGGTGCCAGTAAGTTTGTCCGTGG
GGACTCGATTGCCAGTATCATCATCACGCTGATCAACGTTGTCGGCGGTC
TGTATGTGGGTATGGTAGACCACGGCATGGAGCTGTCGAAAGCAGCACTC
GTGTTTACCACCCTGACGATCGGCGATGGTCTGGTGACTCAGGTGCCGGG
CTTTTTGATCTCACTCGCCGCTGGTTTGATCGTTACCCGAACTTCAGTCG
ACAGTAACCTCCCCCGGGACGTCGTTAAACAGTTTATGATGATGGACCTG
CTCTTGTCATGCAATATCACTGTTTCCGTAGTGATTTTGATGACCACGAT
TTACGTCACACGCCCGCTGGAATTCAGCGTGTTCCCGGCGATCCTGCTGG
GTACCACTCTGGCGCGGCTGGTGTTGAACGTAGCGACCACCCGTCTGATC
TTAACCCGCGGAGCCGATGATGGTACCGCAGCGGCAGGCGGCGTGATTGA
AGCCTTTGGTCAGTTCGTGGCAGGTGGTCATCTGGTTGTGGGTCTGATTA
TCTTCGTGATCCTGGTCACGATTCAGTTTATGGTGATTACCAAGGGTGCG
ACACGTATCAGTGAAGTGGCCGCCCGGTTCTCACTCGACAGTATGCCTGG
TAAACAAATGGCCATTGATGCCGACCTGAATGCCGGGTTGATCTCCTCAG
AAGAAGCGAAAACCCGTCGCCAGGAAATCACCGAACAGGCTGACTTCTAC
GGTTCAATGGACGGTGCCAGTAAGTTTGTCCGTGGGGACTCGATTGCCAG
TATCATCATCACGCTGATCAACGTTGTCGGCGGTCTGTATGTGGGTATGG
TAGACCACGGCATGGAGCTGTCGAAAGCAGCACTCGTGTTTACCACCCTG
ACGATCGGCGATGGTCTGGTGACTCAGGTGCCGGGCTTTTTGATCTCACT
CGCCGCTGGTTTGATCGTTACCCGAACTTCAGTCGACAGTAACCTCCCCC
GGGACGTCGTTAAACAGTTT
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