mRNA_M-pyrifera_M_contig9232.21365.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9232.21365.1
Unique NamemRNA_M-pyrifera_M_contig9232.21365.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A6H5KY11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY11_9PHAE)

HSP 1 Score: 561 bits (1445), Expect = 2.620e-197
Identity = 282/316 (89.24%), Postives = 295/316 (93.35%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNK----EKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKA----ARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTGRGEINGRTVFVFSQDFTV GGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASG +PQLS++MGACAGGAVYSPAMTDFIFMV+++SYMFVTGP VVKTVTQEEVTQE LGGA SHTT+SGVAHAA+DNDLEALRAAREL+GFLP S K    EKPP R TSDSRDRVDESLRYLLPQDSNVPYDMK V+ KVVDD TYFEIMPDWA NITVGFARMEGHPVGIVANNP+FLAGCLDID+STKA    ARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSK+
Sbjct:  103 VTGRGEINGRTVFVFSQDFTVMGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTVSGVAHAAYDNDLEALRAARELYGFLPLSCKGDVDEKPPVRKTSDSRDRVDESLRYLLPQDSNVPYDMKHVVSKVVDDNTYFEIMPDWARNITVGFARMEGHPVGIVANNPMFLAGCLDIDSSTKARGGAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKL 418
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A7S3LK18_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK18_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 8.620e-164
Identity = 230/308 (74.68%), Postives = 263/308 (85.39%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG+G INGR VF+FSQDFTVFGGSLSETHAQKICKIMD+A+ +G PVIGLNDSGGARIQEGVDSLAGYADVFQRNV+ASGV+PQLSV+MG CAGGAVYSPA+TDFI MVR TSYMFVTGPEVVKTVT EEVTQE LGGA SHT  SGV+H AFDND+EAL+  RELF +LP SN+E+PP+R T D  +R D +L  ++P D NVPYDM  VI K+VDD T+++IMPD+A NI  GFAR++G  +G+V N PL +AGCLDID S KAARFVRFCDAFNIP+LT VDVPGFLPGT QEH GIIR G+K+
Sbjct:  109 VTGQGYINGRPVFLFSQDFTVFGGSLSETHAQKICKIMDKAMSVGAPVIGLNDSGGARIQEGVDSLAGYADVFQRNVEASGVIPQLSVIMGPCAGGAVYSPAITDFIMMVRDTSYMFVTGPEVVKTVTNEEVTQEELGGAKSHTQKSGVSHLAFDNDVEALKMTRELFDYLPLSNREEPPSRPTKDPIERADPTLDLIIPSDPNVPYDMVTVISKIVDDSTFYQIMPDYAKNIITGFARIDGSTIGVVGNQPLVMAGCLDIDASVKAARFVRFCDAFNIPILTMVDVPGFLPGTDQEHNGIIRQGAKL 416
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A836CAR6_9STRA (Propionyl-CoA carboxylase beta chain mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR6_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 2.210e-162
Identity = 226/308 (73.38%), Postives = 266/308 (86.36%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTGRG INGR V+VFSQDFTV+GGSL + HA+KICK+MDQA+  G PVIGLNDSGGARIQEGVDSLAGYA+VFQRNVDASG++PQLS++MG CAGGAVYSPA+TDFI MVR +SYMFVTGP+VVKTVTQE VTQE LGGA +H ++SGVAH A DNDL AL+AARELF FLP SN+E  P R T D+R+R   +LR ++PQD N+PYDM +++ KV+DD  +++IMPD+A NI VGF RMEG  VG+VANNP  LAGCLDI++STK ARFVRFCD+FNIPLLTFVDVPGFLPGT QE+GGIIRHG+K+
Sbjct:   91 VTGRGTINGRPVYVFSQDFTVWGGSLGQAHAEKICKVMDQAMHNGAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVDASGLIPQLSLIMGPCAGGAVYSPALTDFIMMVRNSSYMFVTGPDVVKTVTQETVTQEALGGADTHCSVSGVAHVARDNDLAALKAARELFDFLPLSNREAVPVRSTCDTRERAIPALRRIIPQDPNIPYDMVEIVSKVLDDNNFYQIMPDYAKNIVVGFGRMEGRTVGVVANNPSSLAGCLDINSSTKGARFVRFCDSFNIPLLTFVDVPGFLPGTDQEYGGIIRHGAKL 398
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A1E5QA07_9PROT (Methylmalonyl-CoA carboxyltransferase n=1 Tax=Magnetovibrio blakemorei TaxID=28181 RepID=A0A1E5QA07_9PROT)

HSP 1 Score: 467 bits (1202), Expect = 7.140e-161
Identity = 228/308 (74.03%), Postives = 261/308 (84.74%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG G INGR +FVFSQDFTVFGGSLS+THA KICKIMDQAL++G PVIGLNDSGGARIQEG+DSLAGYADVFQRNV ASGV+PQ+SV+MG CAGGAVYSPAMTDFIFMV  TSYMFVTGP+VVKTVT EEVTQE LGGA++HT  SGVAH  F ND EAL   R    FLP +N+EKPP R T+D  DRV+ SL  L+P + N PYDMK++I KVVD+  +FE+MP +A NI +GFARMEG  VGIVAN P+ LAGCLDI++S KAARFVR+CDAFNIP++TFVDVPGFLPGT+QEHGGII HG+K+
Sbjct:   75 VTGYGTINGRLIFVFSQDFTVFGGSLSQTHADKICKIMDQALKVGAPVIGLNDSGGARIQEGIDSLAGYADVFQRNVMASGVIPQISVIMGPCAGGAVYSPAMTDFIFMVEDTSYMFVTGPDVVKTVTHEEVTQEDLGGASAHTVKSGVAHNGFPNDAEALLYLRRFIDFLPANNREKPPVRPTADFSDRVEMSLDTLIPDNPNKPYDMKELIEKVVDEGDFFELMPKYAGNILIGFARMEGSTVGIVANQPMVLAGCLDINSSIKAARFVRYCDAFNIPIVTFVDVPGFLPGTSQEHGGIITHGAKL 382
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A369TBX6_9PROT (Acyl-CoA carboxylase subunit beta n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TBX6_9PROT)

HSP 1 Score: 467 bits (1201), Expect = 1.010e-160
Identity = 227/308 (73.70%), Postives = 266/308 (86.36%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG G INGR VFVFSQDFTVFGG+LSE+HA+KICK+MD+ALQ+G PVIGLNDSGGARIQEGVDSLAGYA+VFQRNV+ASGVVPQLS++MG CAGGAVYSPAMTDFIFMV+ +SYMFVTGPEVVKTVT E VT E LGGA +HT+ SGVA  AF+ND+EAL+  R++F FLP SN+E+PP R T+DS +R + SL  L+P   N PYDMK++I KVVD+K +FEI PD+A NI VG ARMEG  VG+VAN P+ LAGCLDID+S KAARFVRFCD FNIP++TFVDVPGFLPGT QE+GGII+HG+K+
Sbjct:   75 VTGYGTINGRLVFVFSQDFTVFGGALSESHAEKICKVMDKALQVGAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVEASGVVPQLSLIMGPCAGGAVYSPAMTDFIFMVQDSSYMFVTGPEVVKTVTHETVTSEELGGAITHTSKSGVADLAFENDVEALQRTRQIFDFLPLSNREQPPVRPTTDSPNREEPSLDTLVPPSPNKPYDMKELIEKVVDEKDFFEIQPDYAKNIIVGLARMEGRTVGVVANQPMVLAGCLDIDSSRKAARFVRFCDCFNIPIVTFVDVPGFLPGTTQEYGGIIKHGAKL 382
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A0K6IWZ4_9PROT (Acetyl-CoA carboxylase, carboxyltransferase component n=6 Tax=Tepidiphilus TaxID=203470 RepID=A0A0K6IWZ4_9PROT)

HSP 1 Score: 466 bits (1199), Expect = 2.040e-160
Identity = 227/308 (73.70%), Postives = 263/308 (85.39%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG G INGR VFVFSQDFTVFGGSLSE HA+KICKIMDQA+++G PVIGLNDSGGARIQEGV SL GYADVFQRNV ASGV+PQ+S++MG CAGGAVYSPAMTDFIFMV+ TSYMFVTGP+VVKTVT EEVT E LGGA +HTT SGVA AAF+ND+EAL   R  F FLP +N+EKPP R TSD+ +R++ SL  L+P + N PYD+K++ILKVVD+  +FE+ PD+A NI VGF RMEG  VG VAN P+ LAGCLDI +S KAARFVRFCDAFNIP++TFVDVPGFLPGTAQE+GGII+HG+K+
Sbjct:   75 VTGYGTINGRLVFVFSQDFTVFGGSLSEAHAEKICKIMDQAMKVGAPVIGLNDSGGARIQEGVASLGGYADVFQRNVLASGVIPQISMIMGPCAGGAVYSPAMTDFIFMVKDTSYMFVTGPDVVKTVTHEEVTAEELGGAVTHTTRSGVADAAFENDIEALLQLRRFFDFLPLNNREKPPVRPTSDTAERMEPSLDTLVPDNPNQPYDIKELILKVVDEGDFFEVQPDYAKNIVVGFGRMEGRTVGFVANQPMVLAGCLDIKSSIKAARFVRFCDAFNIPIVTFVDVPGFLPGTAQEYGGIIKHGAKL 382
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A0W7YUL2_9BURK (Methylmalonyl-CoA carboxyltransferase n=18 Tax=Comamonas TaxID=283 RepID=A0A0W7YUL2_9BURK)

HSP 1 Score: 465 bits (1196), Expect = 6.200e-160
Identity = 226/308 (73.38%), Postives = 262/308 (85.06%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG G INGR VFVFSQDFTVFGG+LSETHA+KICKIMDQA+++G PVIGLNDSGGARIQEGV SL GYADVFQ+NV ASGV+PQ+S++MG CAGGAVYSPAMTDFIFMV+ +SYMFVTGPEVVKTVT EEVT E LGGA +HTT SGVA  AFDND+EAL   R L+ +LP +NKEK P R T+D  DR D SL  L+P + N PYDMK++ILK VDD  +FE+ PD+A NI++GFARM G  VGIVAN PL LAGCLDI +S KAARFVRFCDAFNIP++TFVDVPGF+PGT+QE+GGII+HG+K+
Sbjct:   77 VTGYGMINGRLVFVFSQDFTVFGGALSETHAEKICKIMDQAMKVGAPVIGLNDSGGARIQEGVASLGGYADVFQKNVLASGVIPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPEVVKTVTHEEVTAEELGGAITHTTKSGVADLAFDNDVEALMMLRRLYNYLPLNNKEKAPVRATTDPADRADMSLNTLVPSNPNQPYDMKELILKTVDDGDFFELQPDYAKNISIGFARMRGQTVGIVANQPLVLAGCLDIKSSIKAARFVRFCDAFNIPVITFVDVPGFMPGTSQEYGGIIKHGAKL 384
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: UPI00145CD03F (acyl-CoA carboxylase subunit beta n=2 Tax=Aromatoleum TaxID=551759 RepID=UPI00145CD03F)

HSP 1 Score: 463 bits (1192), Expect = 2.350e-159
Identity = 225/308 (73.05%), Postives = 259/308 (84.09%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG G INGR  FVFSQDFTVFGGSLSE HA+KICKIMD A+ +G PVIGLNDSGGARIQEGV SL GYA+VFQRNV ASGV+PQ+SV+MG CAGGAVYSPAMTDFIFMV+ +SYMFVTGPEVVKTVT EEVT E LGGA +H+T SGV+   F+ND++AL   R +F +LP +N++KPPTR T D  DR+DESL  L+P DSN  YDMK++ILK+ DD  +FE+ P  A NI +GFARMEG PVGIVAN PL LAGCLDI +S KAARFVRFCDAFNIPLLTFVDVPGF+PGTAQE+GGII+HG+K+
Sbjct:   75 VTGYGTINGRVAFVFSQDFTVFGGSLSEAHAEKICKIMDHAMTIGAPVIGLNDSGGARIQEGVASLGGYAEVFQRNVMASGVIPQISVIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPEVVKTVTHEEVTAEELGGALTHSTKSGVSDLTFENDVDALMMVRRMFNYLPSNNRDKPPTRYTPDIADRMDESLDTLVPDDSNKAYDMKELILKIADDGDFFELQPMHAQNIIIGFARMEGRPVGIVANQPLVLAGCLDIKSSIKAARFVRFCDAFNIPLLTFVDVPGFMPGTAQEYGGIIKHGAKL 382
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A849KBD3_9BURK (Acyl-CoA carboxylase subunit beta n=4 Tax=Comamonadaceae TaxID=80864 RepID=A0A849KBD3_9BURK)

HSP 1 Score: 464 bits (1193), Expect = 3.430e-159
Identity = 225/308 (73.05%), Postives = 264/308 (85.71%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG G INGR VFVFSQDFTVFGG+LSE HA+KICK+MDQA+++G PVIGLNDSGGARIQEGV SL GYADVFQRNV ASGVVPQ+S++MG CAGGAVYSPAMTDFIFMV+ +SYMFVTGPEVVKTVT EEVT E LGGA +HT+ SGVA  AFDND+EAL   R L+ +LP +N+EKPP R ++D  DR+D SL  L+P ++N PYDMK++I K VDD  +FE+ PD+A NI +GFARMEG  VGIVANNPL LAGCLDI +S KAARFVRFCDAFNIP++TFVDVPGF+PGT+QE+GGII+HG+K+
Sbjct:   97 VTGYGMINGRLVFVFSQDFTVFGGALSEAHAEKICKVMDQAMKVGAPVIGLNDSGGARIQEGVASLGGYADVFQRNVMASGVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPEVVKTVTHEEVTAEELGGAGTHTSKSGVADLAFDNDVEALIMLRRLYNYLPLNNREKPPVRPSNDPADRMDFSLDTLIPDNANKPYDMKELITKTVDDGDFFELQPDYAKNIVIGFARMEGQSVGIVANNPLVLAGCLDIKSSIKAARFVRFCDAFNIPVITFVDVPGFMPGTSQEYGGIIKHGAKL 404
[Close]
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Match: A0A6J4FDQ3_9PROT (Propionyl-CoA carboxylase beta chain n=23 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A6J4FDQ3_9PROT)

HSP 1 Score: 462 bits (1190), Expect = 5.570e-159
Identity = 227/308 (73.70%), Postives = 264/308 (85.71%), Query Frame = 1 
Query:    1 VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYSPAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVAHAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLPQDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVANNPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGGIIRHGSKV 924
            VTG G INGR VFVFSQDFTVFGGSLSE HA+KICKIMD+A+Q+G PVIGLNDSGGARIQEGV SLAGYA+VFQRNV ASGVVPQ+S++MG CAGGAVYSPAMTDFIFMV+ +SYMFVTGP+VVKTVT E VT E LGGA +H+T SGVA  AF+ND+EAL   R    FLP SN+EKPP R T+D+ DR++ SL  L+P ++N PYDMK++ILKVVD+  +FE+ P +A NI VGFARMEG  VGIVAN P+ LAGCLDID+S KAARFVRFCDAFNIP++TFVDVPGFLPGTAQE+GGII+HG+K+
Sbjct:   80 VTGYGTINGRLVFVFSQDFTVFGGSLSEAHAEKICKIMDKAVQVGAPVIGLNDSGGARIQEGVASLAGYAEVFQRNVLASGVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTHEVVTAEELGGAVTHSTKSGVADLAFENDVEALLQLRRFVDFLPASNREKPPVRPTADAADRIEMSLDTLIPDNANKPYDMKELILKVVDEGDFFEVQPGYAGNIVVGFARMEGASVGIVANQPMVLAGCLDIDSSIKAARFVRFCDAFNIPVVTFVDVPGFLPGTAQEYGGIIKHGAKL 387
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9232.21365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY11_9PHAE2.620e-19789.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3LK18_9STRA8.620e-16474.68Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A836CAR6_9STRA2.210e-16273.38Propionyl-CoA carboxylase beta chain mitochondrial... [more]
A0A1E5QA07_9PROT7.140e-16174.03Methylmalonyl-CoA carboxyltransferase n=1 Tax=Magn... [more]
A0A369TBX6_9PROT1.010e-16073.70Acyl-CoA carboxylase subunit beta n=1 Tax=Ferrugin... [more]
A0A0K6IWZ4_9PROT2.040e-16073.70Acetyl-CoA carboxylase, carboxyltransferase compon... [more]
A0A0W7YUL2_9BURK6.200e-16073.38Methylmalonyl-CoA carboxyltransferase n=18 Tax=Com... [more]
UPI00145CD03F2.350e-15973.05acyl-CoA carboxylase subunit beta n=2 Tax=Aromatol... [more]
A0A849KBD3_9BURK3.430e-15973.05Acyl-CoA carboxylase subunit beta n=4 Tax=Comamona... [more]
A0A6J4FDQ3_9PROT5.570e-15973.70Propionyl-CoA carboxylase beta chain n=23 Tax=Rhod... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9232contigM-pyrifera_M_contig9232:1585..11054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score572.0
Seed ortholog evalue1.7e-160
Seed eggNOG ortholog2880.D8LQL0
KEGG rclassRC00097,RC00367,RC00609,RC00942
KEGG koko:K01966,ko:K01969
KEGG ReactionR01859,R04138
KEGG Pathwayko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200
KEGG ModuleM00036,M00373,M00741
Hectar predicted targeting categoryother localisation
EggNOG free text desc.CoA carboxylase activity
EggNOG OGsCOG4799@1,KOG0540@2759
EC2.1.3.15,6.4.1.3,6.4.1.4
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size945
Cds size945
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9232.21365.1prot_M-pyrifera_M_contig9232.21365.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9232 1585..11054 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816836.2304482-CDS-M-pyrifera_M_contig9232:1584..17131622816836.2304482-CDS-M-pyrifera_M_contig9232:1584..1713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 1585..1713 +
1692278207.0214145-CDS-M-pyrifera_M_contig9232:1584..17131692278207.0214145-CDS-M-pyrifera_M_contig9232:1584..1713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 1585..1713 +
1622816836.243674-CDS-M-pyrifera_M_contig9232:3100..33291622816836.243674-CDS-M-pyrifera_M_contig9232:3100..3329Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 3101..3329 +
1692278207.0387409-CDS-M-pyrifera_M_contig9232:3100..33291692278207.0387409-CDS-M-pyrifera_M_contig9232:3100..3329Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 3101..3329 +
1622816836.2577395-CDS-M-pyrifera_M_contig9232:6584..67551622816836.2577395-CDS-M-pyrifera_M_contig9232:6584..6755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 6585..6755 +
1692278207.0503938-CDS-M-pyrifera_M_contig9232:6584..67551692278207.0503938-CDS-M-pyrifera_M_contig9232:6584..6755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 6585..6755 +
1622816836.2707758-CDS-M-pyrifera_M_contig9232:7971..80871622816836.2707758-CDS-M-pyrifera_M_contig9232:7971..8087Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 7972..8087 +
1692278207.0639544-CDS-M-pyrifera_M_contig9232:7971..80871692278207.0639544-CDS-M-pyrifera_M_contig9232:7971..8087Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 7972..8087 +
1622816836.2816148-CDS-M-pyrifera_M_contig9232:9115..92681622816836.2816148-CDS-M-pyrifera_M_contig9232:9115..9268Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 9116..9268 +
1692278207.0784872-CDS-M-pyrifera_M_contig9232:9115..92681692278207.0784872-CDS-M-pyrifera_M_contig9232:9115..9268Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 9116..9268 +
1622816836.2920218-CDS-M-pyrifera_M_contig9232:10907..110541622816836.2920218-CDS-M-pyrifera_M_contig9232:10907..11054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 10908..11054 +
1692278207.0922525-CDS-M-pyrifera_M_contig9232:10907..110541692278207.0922525-CDS-M-pyrifera_M_contig9232:10907..11054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9232 10908..11054 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9232.21365.1

>prot_M-pyrifera_M_contig9232.21365.1 ID=prot_M-pyrifera_M_contig9232.21365.1|Name=mRNA_M-pyrifera_M_contig9232.21365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=315bp
VTGRGEINGRTVFVFSQDFTVFGGSLSETHAQKICKIMDQALQLGCPVIG
LNDSGGARIQEGVDSLAGYADVFQRNVDASGVVPQLSVVMGACAGGAVYS
PAMTDFIFMVRQTSYMFVTGPEVVKTVTQEEVTQETLGGATSHTTMSGVA
HAAFDNDLEALRAARELFGFLPPSNKEKPPTRITSDSRDRVDESLRYLLP
QDSNVPYDMKDVILKVVDDKTYFEIMPDWANNITVGFARMEGHPVGIVAN
NPLFLAGCLDIDTSTKAARFVRFCDAFNIPLLTFVDVPGFLPGTAQEHGG
IIRHGSKVGGMMYV*
back to top

mRNA from alignment at M-pyrifera_M_contig9232:1585..11054+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9232.21365.1 ID=mRNA_M-pyrifera_M_contig9232.21365.1|Name=mRNA_M-pyrifera_M_contig9232.21365.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9470bp|location=Sequence derived from alignment at M-pyrifera_M_contig9232:1585..11054+ (Macrocystis pyrifera P11B4 male)
GTGACAGGCAGAGGCGAGATCAACGGGCGGACGGTGTTCGTCTTCAGCCA
AGACTTCACCGTGTTCGGTGGCAGCCTGTCGGAAACACACGCCCAGAAAA
TCTGCAAGATCATGGACCAGGCCTTGCAGGTCTGCTCACATCTGCCGCGG
TACCTTGGTACCGCTCGGGCCGGTGGTGTAAGGCGCACCGTTAGATCAGG
TTGCGAATCGCGCAGGGGTCTTGACTTTTTCCTGTTAGAGAGGTGTACGA
TACGTTTCAGCCATGATGTGTATATATATCCGTCTGTTTTTTTTGTATTT
TTTGTATTTTTTTTACTATATTTTTTCCCTGAGGTATTCTTCCGCCCCAA
TTTTTGGAGACTGTCCTGTGACCACTGACTCGATATGGTGGACATGAGTC
AACGTGAGAACAACAACAAGAACCACAACGTAAGGCCTGCTTGTTCTCTG
ATGTGAGCATAACACGGGTGTTACGTTCGAAACCAGAGTCGTGCGATGTA
ACGCTCGGTATCTGAACAAAAAATCAAAGCGAGTTTTGATTTTGCATCGG
CAAACGGATATTTTTTCTGGTGCGTTTTGTAATATTAAAGAAAAAAGTCT
TTTTAGTTTTTTAGTTTTTGCTGCGAAAGTCATGATATCGCACTATAATT
CCCAGCAGTTTAACCCCCAAAAAATGCGTGTGTTGTTGTATCAGGGTTGA
GACACACCTACTGCTGTAGAAATTGCCGACGCGGAAACATTCCATGGGCA
TTCGGGAGGTCGGATTGAAGAGACAGACAGAAGGGCACCCAGTGGCATTT
TTTTTTGTCGCGGTTCTCACGCTTACTTAATTGTGCAGGTCTCCGTTTAC
AGGGCTGTTGCGATTCGGTTCTATCAATGGTTGATCGCCCACTCCACGAC
GACGGGTTGTGTTCGCTGTGGCCGGGTGTTTTGTATGTGACCTACTGGGG
ATGGCGCGCAGGACACGAAACAAATAGTTACTTCCTGGTAAACAGTATTC
GCTTCGCACGGGTCTTACCATCAAATTGGAGCGAAAATCCGTTCATGGTC
TTTCCGCTGCAGTTAACACACGGTTGTTACACTCCTGGCACCCCATGTAT
AGGCAAATCCCCGTCCATGTAACATTTTTTTTTTGCCGCCAACAATCGTC
GGACTTAAGCGAAATACATGAATATATATTTACATTTGCGGTCGGTCCTT
GAGGTGGTGTTGGTTCTGTCGTCACACAAGCACACCTAATACATGGCAAG
AGTCTGAGCTGGAGCGGGTGGTGCGACAGGCTGGGCTCGTCCTTTTGTCA
ACCTCGCAGGATGAGCCGGATTCTCCATACTTGAACCCCCCCTTTGATGT
GCTTGGTGCAAGCAATGTCTGCCTGGTCGGTGAAAACCCGACGTGCTCCA
TCCCGGCATTGTAGGGATGCGAGGGAGGGTCTGTGATGGTCATACGACCA
CGGCCTTGCATACGATCGAGTACATTCCCCGCCCCCATCTCCTACTTCTC
GATCACGCCTCCGCAGCTGGGATGCCCCGTCATCGGGCTCAACGATTCGG
GAGGGGCCCGCATTCAGGAGGGCGTCGACTCGCTGGCGGGGTACGCGGAC
GTTTTTCAGCGCAATGTGGACGCTTCGGGCGTGGTCCCGCAGCTGTCGGT
GGTCATGGGAGCGTGCGCGGGCGGCGCGGTGTACTCCCCCGCCATGACGG
ACTTTATATTCATGGTCAGGCAGACGTCCTACATGTTTGTCACAGGTGCG
GTGCGGTGCGGTGCGGTGCGGTGCGGCGGTTGTATTGTGTCATGTCAGCC
GTGCTGCCACGGTAGGGGTTGCAAATAGGGCTTGCAATTAGGGCTTGCAA
TTATTACGGGGGGCCATAGTAAATGGGACCAAATACTGTTTGTAATAATA
GGTAAATACATAGGTCTTGTGTGTACCGTATGTCCTATATACTATGGTCC
CCCGCAATAGAGGTTTACACTAGGGGTTGCAACTAGGGAAGGCAAGTAGG
GGTTGCAATTGGGAGTAGCAACTAGGGGTTGCAATTAGGGGTTTCAATCA
GGGGTTTCAATCAGGGGTTGCAAGTGGGGGTTGCACCAAGGGGTTGCAAG
TAGGGGTTGCAAGTAGGGGTTGCACATAGGGGTCGCAAATAGGGGTTGCA
GGTAGAGGTTGCAAGTGGGGGTTGCACCAAGGGGTTGCAAGTAGGGGTTA
CAAGTAGGGGTTGCAAGTAGAGGTTGAAGGTAGAGGTTGCAGGTAGGGGT
AACAAGTTCGGGTTACAAGTATAGGGTTTGCAATTAGAGGTTGAGTCCGA
AAAAATTATCACGAACGGGGGCGGGGCTCCTCCACCATTGCAACCGAGGA
GCTTCGGCTTCGTCAAGCTGGTTTGTTTAGGACTGCAGTCCCGTCGTAGG
GTTAGGGTTAGGGACAGATTACTTCGAATTAGAGTAGTATGCATGTTTAT
GGGCAGTAGTGCTGTACTAAAAGGGTCAGCCCCTCTCTTGGACCGAGGTA
CCGTTTTGAGGAAGACTATTTGGAACGAACTAGAGTCGAACATGCTAAGT
GTAAGTGTGTTTATGCTCTGCGCAGTAGCAGAAGGGTTAGCATTATGGTG
CCCTAGCCCATGGGGATGGGGTGTACGTTGTATACAGGCGTTTTTGTTAC
TGGATATTTTTTGTTTTTATCAAAAGTCGGTTGTTGGGTGAGAGGTTATA
GAGCTCCTGAAATGAGCTGTAGAAAAATCACTTGTTGCCCTTTTGGCGTA
GCATGTGTCGTCTGTTCGTCTTGTTGTACTGGAGGCACGACGATTATTTT
TGTTTTTAGGCGAGTTTTCGGAACCCCTAAGTCTGACCATCCAGTCATGC
ACGAAACCCGTGGAATGCGGGCGCGGACACTATTACGGGGGACCATAGTA
AATAGGACCTACGGTACACACGAAAACCTATATAAATACCTATTTTTACT
AACAATATTTTGTCCTATTTACTATGGTCCGCCGTAATAGGAGTGGGTGT
CATGGAGCTGTCCCAATCCGGCTGTCAGGTACTACGCTTGGAGCTCATTG
GCTTGAGATCCCACCGCATTTGTGTGTGCAACCGCCAGGTTGTTGCGAGC
AGCAACAACACAGGTACCACAACAGACTTTACACTATCCCAACTACGGCA
TGCAGCAGCTGCCTGCGACCGCACTCATTCATGGGCGTTGCCTGCGGTCA
GTGCTGTTTCTTTTGTCTTGGAAATTTAACCAGATCTTTGAAGCATGCGC
TCGGTAGGAAGCGGTGATTGCCTCCTCCCTCCTCCGCCACGTTTTCTTTT
TCAATGGTATGTACGGTAGCAGTCGGTGGTGCCGGGTATTGTGGAGTTCC
TACGGTAGATGGCATTTTGGGCCGATGGTGTTTACCCTTCTGGAAAACAG
GCACAGCGATCAAAACTCTGCCAGATGCGGTTTTATCTTAAGAGAGGGAG
CTTGCAGCTGCCGCAACTGCTGTAGTTGATATATGCGCCGAAGACCCTCG
TGCATTGTGTGATAGTTCGGGTACATGCTCTCTACCCCCTTTTGATGTCA
TGCTCCAGCCGGCGCACGTGTCGAAGATCTCCGTGCGTTTTTTGGACACA
AGTACCGCCACCAAAAATGTGCCAGGTGCTCTCTTACCTTGCAGCTGCTG
TAGTAGTACCATGCTCCTGCCTGCGCATTTTGTCGATCGTCTCCGTGAGT
TGTACCAGCGTGCTAGTTGGGGTACGTCCCCATTTCCCCTTTCGTGTCAT
GCTCCTGCGCATGCGTCGAAAACCTCCGTGCGTTGTATGATGGGTCCGGG
TACACCTTTCGTATAATGCTGCTGCCGCGCATGTGTCGAGGATCTCCGTG
CGTTGTGTGATAGTTCGAGTACATCCTCTCTACGCAATTCATGTCATGCT
GGTGCGCATGTGTTGAGTATCTCCGCGCGTTGTATGATGGCTCGGGTAGA
TCGCCCGTTCCCCTCTTGGTGTCATAAGCCTGCGCATGTGTCGATTTTTT
TTTTTTATTGTATTGCGGGTGCATCCTTTGGCAAAGCAGAGCCCGGACTG
ATTCGCGCGACCGACGCTTCAATCGCCACTTGTTTTGGACAGACCATATA
ATATCCTACATGATGATCTAGATCTTTCACGGCAGATAGATGTATTCCTG
ATCTGTATGATCTGTATGATCTGTATGATCTGTATGATCTGTATGATCTG
TATGATCTGTATGATCTGTATGATCTGTATGATCTGTATGATCTGTATGA
TCTGTATGATGTAGCTCATGTTGCCGGGTGGCAGCCGTATAATCTGCATG
GTCTACTGTAGCAACATGTGCCCTGGGTTTGGGTCTGTCTTAAAAGGCAG
ATCCTGCATAACACCTCGCAACGGCGGGTGAGGAACTAGATCATCAGATA
GATGATATAGATCATGATTATGTCTGATCTGTCTGATCTGTGGTCTGATC
TGTCTGATCTGTGTGAAGTGTATACAAATTTCCCCTTGAATTCCCAAAGG
GATTACTGCTGTAGTAAAAATCTAACGATATTTGCATGTGTTTGTCTGGT
GTCCTGGAAAGATCACACCAAGGAGACCGACAACGATATTTTTCCCGCAA
GGGCGGATTGCTTACGAGGGATAGGAGTATATATGCCCACCGTCGGCGTG
GCATGGCATAACAACAGCCACATGATATTTTTAGTACATTCGCTCACGTT
CGATGCATACCTATGCCAAGAGGTTCGAGATGGGCCACTTTCCCCTTTTT
CTACTGATACCAATAATACCTGTCATGTATGTCATGCGACTTGGCATACA
CGGTCGGCGGCATTGCTATGCCCATGCCTTCAGGGCATGGCCCACACGTT
TGCCCATATGCCCTCAACCCCCCGTGCCGCTTAGCCGACAGCTGAGACCG
AGCGGCGATCAAAGTGTCTGAATCTGATGTTGATTTCCCCTGTCCCTCGC
TCCGTCGTCGCCTCCTGCCTCTCTTGCTGTTGTTTCTTGTGTTTCGCTAG
GTCCGGAGGTAGTGAAAACGGTGACTCAGGAGGAGGTGACCCAGGAAACC
CTCGGAGGGGCCACCTCGCACACTACCATGTCGGGGGTAGCGCACGCGGC
GTTCGACAACGACCTGGAGGCGTTGCGGGCGGCCAGGGAGCTGTTCGGCT
TCCTTCCGCCGAGCAACAAAGGTGGGGCGTTTTTTTTTGTTCTTGTTTTT
GTTCTTGTTTTTGTTTTTTTGTCAGGGGCTTTGTTGCTGTTTTTTTTTGT
CCACCTTCGATTACGAAAGTTTTTTTTTCATTTTGCTTTGATTGTAGTAT
GTAGAAGGAATACACGGCGAAGAAAAGTGGGGATTAGCCGTTTTAGTACT
GCAGTCCCGTTTTGGAGACGAACCACTCTAATGTCAAGTATTTTGTCTCC
TTAACGGGACTGCAGTATTATTACGGGGGACAGTAGTAAATAGGACCAAA
TATTGTTAGTAAAATTCTGGAAATATATAGGCTTTTGTGTGTACCGTAGG
TCCTATTAACTATGGTCCCCCGTAGTAGTTGTATTCACGAACTTGTTGGC
ATTTTCGCGATACTGCCGTACTACATAGAAAACGTGGTCAAATGACACGG
GCAGCTATTCATAAGACTTTTGAGTGGACATCGCTTTTTCGGGTGCAACA
TGTTATAGCTGGTATGCCTTTTCAGTGGACGGAAATATGAGAACCGCCCG
TGTTGAGTATTGATATACAAACCGTGCTTATGCTTTGGGACATAGCGGTG
TGCGTTTCTGGACGACCTGGACACACGATGTTGAGGACCCAGCGAAAGCT
AGCAGCCAAAAGCTAGAGGCGATTTTCCCTCCTCTCCTTTTTTTCGTACA
TCGAACAGGTCGCCGATCCCCCCGCTCCATGATGTGGGTGATCTAGCTCA
TGTTGCTGGGTGGGAGTCATAAATAATCTGCCATATCTACTATATATTTC
CTGGGTTAGATCTGTATTAGATCTGTTCTATGATACACAGATCATGAACA
ACATTTCATACCCGCAGGTGATGATGATCTAGATGATCTGTAAGCAGACA
GATAGGTCGTGATATTTCCGGTGTCTAGAGGTTATTTTACGTTTAACCGT
ACTACTCTACTTGAGATTCTGTAACGGTACTCCTTGAAAACAAATTGCAC
GATGGTTTCGGCCTTGCTGTCGTTCGATTTTTGCTATACGTTGTTCGACC
ACAAGCCGAATCGGCGTCGCAGGTCAGCACGCGTATTCATACCTGAGATT
GTCTCGGATACTCCGTAACCTCGCCCTTTATGTGTCTGCGGGGGTCGTGA
CCACCCACCGCTTGATAATGTTGAGTTCGGACCCACCCGCCGCTTGTCCG
TGTTAATTTCGAACCCACCCGCCGCTGACTCTCACAGAAAAGCCTCCTAC
GAGGATCACCAGCGACTCCCGCGATCGCGTGGATGAGTCCTTGCGGTACC
TGCTTCCGCAAGACTCGAACGTCCCGTACGACATGAAAGACGTGATTCTG
AAGGTGTGTGACCTGCCTTTGCCTGCCTTTGCCTGCCTTTGAGGGGGAAA
AGGAGGGGGGTGATGAATATCGAACGATAATGGAGTTGGATGTGTGATAC
CGACAAGTGAAAATACAGGTCGGTTGGTACGATATGATGAAGTCGGTACG
ATGCGATACGAGACAAAAAAAATCAGACTGATACGATATTGTCAAATCGG
TACGGTACGATACGGATCACGGAACATATACCTGGTAATCGATAAGATAA
TATCGAATCGACACGATACGATACCGATGCGCGAAACATATAATCGATCA
AATCGATACGATACCGATAAACGAAACATAAAATCGATAGGATATGATCA
AATCGACACGATATGATACTGATAAACGAAACATATCATCGATACGATAC
GATACGATGCCGATAAACGAAAAATCAAATCGACACGATTTTATCAAATC
GACACCATACAATACCGATATACACGAAAACCATGACCGATATATAAAAT
ATCATGAAATCAATGCGATACGATACCGATACACGAAAAGTCTTTTAATC
TCAATAGTCGATACACACGTCTAAACTTTCCGTTCAACATCATAGTTTAA
AAAAACAGAGAAGCCCGGGGGATGGGGGAAAAAACTCGTGATGTAAGATC
TATCGAAAGTTGGATGCTTCGATTTATCGATACGATATTTTCCGCTGGTG
TCCCGTGCTTTCTTTCTGGCTAATGGTATTGCGAACGTTTTCTCGCCACT
CTGTACGGAATGATTGACGATTTTTGCTGGTTTCGAAACGGTCCTTACTT
TTGCGTGCGGAGAGGATGTTCACGGCTCGACTTGGACCTGCTGAGGGCCT
CCTCTCCTCGTAGGCTGGATCGTCAAGGTTTTACAAAGTTGTGGAGAAGG
TATCGGTTGTTGTTGTTGCTGCTGTTGTTGTGGTCGTCGTTGTTGCCGAT
GCTTTTGCAGTTGCTCTTGCAGTTGCTGTTGCTGCTGTTGCTTTCTTCCT
CTAAAGTGCGCGGTGACCCGGATGCCGGCAGGTGGTGGATGACAAAACAT
ACTTCGAGATCATGCCGGACTGGGCCAATAACATCACGGTGGGCTTTGCC
AGGATGGAGGGCCATCCCGTGGGGATAGTGGCCAACAACCCTCTCTTCTT
GGCGGGGTGTCTCGACATCGACACCTCCACCAAGGTAAAGGCCGGCTGCT
TTGTCCCGCGACTGGACCGGTGTTGTCTCAACCATCGCAAAAACCGTTTC
GTGCGTCATTCATGTTCTCGTCTGGTCATTGTTTTTACGTGCCAGCTCGA
CTCGAGGTAGGCTTTCAGCTATATCCGGCTGTTTTCCTATGCGGTTCGAT
TTCGAGCTGCAGATTTGTACTTTTCGATCCCCAAATGGAACCATCATCTG
CTTAACGCAGTCCGAATGTGCAAAATTCGACCAGTCTCGTTTCGATTTGA
GAATCCGATGACCCACGTCGTCAGATTTCGGCTCAAATATCCGACGACTT
GGGGCCACATTAGACTTTCTGATCGAAAATAGCATGGTCTCTAAATTTAA
GATGTTATCCACGCCAGCAAGCAGCAGCAGCAGCAGCAGAACGATCGATG
GGTTGGATGGTGAAGACAGCGGTAAAGCCACGTTGTTTCGCGACCGACGT
GCAGTCGACGGACGGCGCGTCTCTCCATGGTTGGACTGTAGTCGACTCGC
GCGGGATCGGGCCTAGAGACCAAAAGAGGCGCACTCGGCGCGCACCTATC
CGTGGATACGTACTCGTAGACTACAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGTAGCGGCAGTCAGTCAGTCACATTGTGAAATACAAGATACCAAG
ACAGGTTGACTCTATTAATAGCGCGCTCGGCACATGTGTTCGCGGCTAGA
CCAGAGGCAGTCAGCGTGGGCGCGCACTCGGCGCGTTTTTCGCTGCACCA
GACCACGACAACAGTTGGTCTCGGCGTTTGGTCGAATGTCTGCACGCACG
ATAAATCCGATTTTTTTGCGTGGGAAGACTGTTTCGATTCGCGAACTTGG
CACAGTTGAAAATGCGATCGGGTCAAAATCTGAAGCTCAAAAATCTTAAC
CACATGCCTGGTAGGAAACAGCCTGGGTATGGAGATTCCTTCGCTCATTC
GAGGTTTCTCGTTGTGTTTTTTTTTTTCAAATTAAATGTGGCATTCACTA
ATACGTCAGCGGGAAGTCCGACTGATGCAGTGGCTGATACTCAACTTTGC
AAACCTCCAGTTATGTTATACGTCGGCTGTGCGCCTTCTAGTTTTTTCAC
GTAAATGTTACCAAGTTGTTACGAGTAGAAAGTGGGACGCAAAACCGCCT
GCTTGGTTTTCTGTTTCCCCTCAATTTTGCACACCTCGCACAGATTATCG
ATTTATCCGTTAGTAGCAGGCCGTTCAGGGCAGATAAATAGATCCCTGAT
CTGTACGATCTGTACGATCTGTACGATCTATATGATCTAGCTCATGTTGC
CGGGTGGGAGCCGTACAACAAGCATGATCTATTGCAGCACATTGCTTAAT
GGGTTGGATGATCTGCCCTATAAGGCAGATTTTGCACAACCTCTCACAAC
GGCAGGCGTAGGAACTAGATCATCTATCTGCAGACAGATCAGATAGATCA
TCATCTGTCTATGCAAGGTGTGCAATCTTGATCTTGCAAACCGATAACTC
CCAACTATCTCCCCCCCTCGTTGTTCGTTTTTTGGGGCGGCGCACGATCC
GGACGGCCCCTATTCGGGGACGACGCGACACAACCTTTTGCCGCCGCCCC
ACCCCGCCCCGCCCCGCCAATAGGCAGCTCGATTCGTTCGTTTCTGCGAC
GCCTTCAACATCCCGCTGCTGACATTCGTAGATGTGCCGGGGTTCTTGCC
CGGGACGGCGCAGGAGCACGGGGGCATAATCCGACACGGCTCCAAGGTAG
GCGGGATGATGTACGTATAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig9232:1585..11054+

>mRNA_M-pyrifera_M_contig9232.21365.1 ID=mRNA_M-pyrifera_M_contig9232.21365.1|Name=mRNA_M-pyrifera_M_contig9232.21365.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1890bp|location=Sequence derived from alignment at M-pyrifera_M_contig9232:1585..11054+ (Macrocystis pyrifera P11B4 male)
GTGACAGGCAGAGGCGAGATCAACGGGCGGACGGTGTTCGTCTTCAGCCA
AGACTTCACCGTGTTCGGTGGCAGCCTGTCGGAAACACACGCCCAGAAAA
TCTGCAAGATCATGGACCAGGCCTTGCAGGTGACAGGCAGAGGCGAGATC
AACGGGCGGACGGTGTTCGTCTTCAGCCAAGACTTCACCGTGTTCGGTGG
CAGCCTGTCGGAAACACACGCCCAGAAAATCTGCAAGATCATGGACCAGG
CCTTGCAGCTGGGATGCCCCGTCATCGGGCTCAACGATTCGGGAGGGGCC
CGCATTCAGGAGGGCGTCGACTCGCTGGCGGGGTACGCGGACGTTTTTCA
GCGCAATGTGGACGCTTCGGGCGTGGTCCCGCAGCTGTCGGTGGTCATGG
GAGCGTGCGCGGGCGGCGCGGTGTACTCCCCCGCCATGACGGACTTTATA
TTCATGGTCAGGCAGACGTCCTACATGTTTGTCACAGCTGGGATGCCCCG
TCATCGGGCTCAACGATTCGGGAGGGGCCCGCATTCAGGAGGGCGTCGAC
TCGCTGGCGGGGTACGCGGACGTTTTTCAGCGCAATGTGGACGCTTCGGG
CGTGGTCCCGCAGCTGTCGGTGGTCATGGGAGCGTGCGCGGGCGGCGCGG
TGTACTCCCCCGCCATGACGGACTTTATATTCATGGTCAGGCAGACGTCC
TACATGTTTGTCACAGGTCCGGAGGTAGTGAAAACGGTGACTCAGGAGGA
GGTGACCCAGGAAACCCTCGGAGGGGCCACCTCGCACACTACCATGTCGG
GGGTAGCGCACGCGGCGTTCGACAACGACCTGGAGGCGTTGCGGGCGGCC
AGGGAGCTGTTCGGCTTCCTTCCGCCGAGCAACAAAGGTCCGGAGGTAGT
GAAAACGGTGACTCAGGAGGAGGTGACCCAGGAAACCCTCGGAGGGGCCA
CCTCGCACACTACCATGTCGGGGGTAGCGCACGCGGCGTTCGACAACGAC
CTGGAGGCGTTGCGGGCGGCCAGGGAGCTGTTCGGCTTCCTTCCGCCGAG
CAACAAAGAAAAGCCTCCTACGAGGATCACCAGCGACTCCCGCGATCGCG
TGGATGAGTCCTTGCGGTACCTGCTTCCGCAAGACTCGAACGTCCCGTAC
GACATGAAAGACGTGATTCTGAAGAAAAGCCTCCTACGAGGATCACCAGC
GACTCCCGCGATCGCGTGGATGAGTCCTTGCGGTACCTGCTTCCGCAAGA
CTCGAACGTCCCGTACGACATGAAAGACGTGATTCTGAAGGTGGTGGATG
ACAAAACATACTTCGAGATCATGCCGGACTGGGCCAATAACATCACGGTG
GGCTTTGCCAGGATGGAGGGCCATCCCGTGGGGATAGTGGCCAACAACCC
TCTCTTCTTGGCGGGGTGTCTCGACATCGACACCTCCACCAAGGTGGTGG
ATGACAAAACATACTTCGAGATCATGCCGGACTGGGCCAATAACATCACG
GTGGGCTTTGCCAGGATGGAGGGCCATCCCGTGGGGATAGTGGCCAACAA
CCCTCTCTTCTTGGCGGGGTGTCTCGACATCGACACCTCCACCAAGGCAG
CTCGATTCGTTCGTTTCTGCGACGCCTTCAACATCCCGCTGCTGACATTC
GTAGATGTGCCGGGGTTCTTGCCCGGGACGGCGCAGGAGCACGGGGGCAT
AATCCGACACGGCTCCAAGGTAGGCGGGATGATGTACGTATAAGCAGCTC
GATTCGTTCGTTTCTGCGACGCCTTCAACATCCCGCTGCTGACATTCGTA
GATGTGCCGGGGTTCTTGCCCGGGACGGCGCAGGAGCACGGGGGCATAAT
CCGACACGGCTCCAAGGTAGGCGGGATGATGTACGTATAA
back to top