mRNA_M-pyrifera_M_contig92317.21364.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92317.21364.1
Unique NamemRNA_M-pyrifera_M_contig92317.21364.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: A0A1W2G6R1_9BACT (Uncharacterized conserved protein n=2 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G6R1_9BACT)

HSP 1 Score: 396 bits (1018), Expect = 3.270e-135
Identity = 193/246 (78.46%), Postives = 218/246 (88.62%), Query Frame = 1
Query:   25 EACETEMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYYYYTETQGLLIDYAEVQEEVEVDCGNGSIMPHYYYEDMLYASAELSNSSGGGSAGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            +AC+TEMITYYEP++V +SEVVKDA F   + IENPGKIYYKDEYLFINE+D+GIHVIDNRD S+P+EIGF+ LPGNKDLAAKG+FLYADNYTDLVVLDIS+KTNI EVNRIE VFDAYYYYTE  G+LI Y EVQEE+E+DC N   M  YY +D+++ASAE + +     AGIGGSLARFTIT+N+LYTVNEYRLKLFDIT+TDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP
Sbjct:   39 KACDTEMITYYEPVFVPRSEVVKDAEFAAPQLIENPGKIYYKDEYLFINEIDQGIHVIDNRDRSNPVEIGFVVLPGNKDLAAKGNFLYADNYTDLVVLDISDKTNITEVNRIEGVFDAYYYYTEADGMLISYTEVQEEIEIDCDNEDWM--YYTDDLVFASAESNLARNSSGAGIGGSLARFTITDNFLYTVNEYRLKLFDITVTDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 282          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: A0A5E8ARN3_9BACT (Uncharacterized protein n=2 Tax=Imperialibacter TaxID=1649461 RepID=A0A5E8ARN3_9BACT)

HSP 1 Score: 237 bits (604), Expect = 3.750e-72
Identity = 123/274 (44.89%), Postives = 172/274 (62.77%), Query Frame = 1
Query:    4 LLAQGCKEACETEM-ITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAY----YYYTETQGLLIDYAE--VQEEVEVDCGNGSIMPHYYYEDMLYASAELSNSSGGGS--------------AGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            LL+ GC + CE +   TY++P+Y    E+     F   + +  PGKIY+KD  LFINEV +GIH+IDN + SSP ++ F+ +PGN D+AAKG++LYAD+Y DL+V DISN  +I+ V R+E  F A+    + +   QG++  Y E  ++E  E+DC +      ++Y +   AS    NSSGG +              AG+GGS+ARF I  ++LYT++   L LFDIT  D P  G  VD+GWGIET+FPY DKLF GA +GMHIY+N+NP
Sbjct:   51 LLSTGCTDTCEVDRSYTYFKPVYTTTDEIRSAVAFGAPQSVNQPGKIYFKDGMLFINEVGEGIHIIDNTNPSSPSQLSFVTIPGNFDMAAKGNYLYADSYIDLLVFDISNVNDIKMVKRVEGAFQAFSNLPFNFDSWQGVITSYKEATIEEVTEMDCASNGGGDMFFYAEAADASFVKFNSSGGATLMANSTSNAPATTAAGVGGSMARFAIYEDFLYTIDASSLYLFDITQLDDPQSGARVDVGWGIETLFPYEDKLFIGANNGMHIYNNANP 324          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: UPI001F600C2B (hypothetical protein n=1 Tax=Sabulibacter ruber TaxID=2811901 RepID=UPI001F600C2B)

HSP 1 Score: 224 bits (571), Expect = 1.120e-67
Identity = 123/257 (47.86%), Postives = 159/257 (61.87%), Query Frame = 1
Query:   16 GCKEACE-TEMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYYYYTE--TQGLLIDYAEVQ-EEVEVDCG----NGSIMPHYYYEDMLYASAELSNSSGGGSAGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
             C + CE T   T YEP+Y+ K E+      E AR ++NPGKIY   ++L +NEVDKGIHVIDN + +SP  + FI +PGN D+A KG+ LYADNY DLVVLDI+    ++ VNR+EN+F  +       +   L  Y   Q  E   DC     +G ++ +Y      Y +   +    G   G GGS+ARFTIT ++LYTVN   L+LFDI+    P +G S+ LGWGIETIFPY DKLF G+ SGMHIYDNSNP
Sbjct:   26 ACTDECESTVTYTVYEPVYMMKDELRASVKVEPARALQNPGKIYAYGDFLLVNEVDKGIHVIDNSNPASPQNLSFISIPGNVDMAVKGNILYADNYIDLVVLDITQPQQVKLVNRVENIFPVHGLTISPASTSFLATYTSRQVTETYADCNGRFQDGGVV-YYDQASNSYTTKAPAGVRNGNPMGKGGSMARFTITGDHLYTVNLSSLQLFDISTLTQPQKGASIPLGWGIETIFPYQDKLFIGSTSGMHIYDNSNP 281          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: UPI001E6376C3 (hypothetical protein n=1 Tax=Pontibacter sp. XAAS-A31 TaxID=2894083 RepID=UPI001E6376C3)

HSP 1 Score: 221 bits (563), Expect = 1.710e-66
Identity = 125/268 (46.64%), Postives = 165/268 (61.57%), Query Frame = 1
Query:    4 LLAQGCKEACETEMITY--YEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYYYYTETQGLLI-----------DYAEVQEEVEVDCGNGSIMPHYYYEDMLYASAELSNSSG--GGSAGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            L+   C + CET  ITY   EP+Y+ ++ +      + AR +  PGKIY KD +LFINE+DKGIH+IDN + SSP  + FI++PGN D+A KG+ LYAD+Y DLV LDISN  ++Q V RIEN+F        T G+L+           +   V   VE DC      P   + D   +    SN++G  G +AG GGS+ARF+I  + LYTV+   ++LFDI+    P EG  + LGWGIETIFPY DKLF G+ +GMHIYDNSNP
Sbjct:   22 LMLNACTDECET-TITYNVQEPVYMMRAALRNAVQVKPARTLTEPGKIYAKDHFLFINEIDKGIHIIDNSNPSSPQPVSFIEIPGNVDMAVKGNILYADSYIDLVALDISNPQDVQLVKRIENIFP-------TNGMLVNDTASVFVASYETRTVTHAVESDCNGNVRNPSPVFNDAG-SFVRQSNTAGRPGNAAGKGGSMARFSIVGDQLYTVSISDMQLFDISNAAEPREGAKISLGWGIETIFPYEDKLFIGSTTGMHIYDNSNP 280          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: A0A2E8MU15_9RICK (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8MU15_9RICK)

HSP 1 Score: 220 bits (561), Expect = 3.410e-66
Identity = 117/272 (43.01%), Postives = 174/272 (63.97%), Query Frame = 1
Query:    4 LLAQGCKEACET-EMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVF---DAYYYYTETQGLLIDYAEVQE--EVEVDCGNGSIMPHYYYE-----------DMLYASAELSNSSGGGSA--GIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            LL  GC + CET    TYYEP+Y+   ++ +    E A+ I   GKIY+ ++++ INE + GIH+I+N D  +P  +GFI++PGN DLAA   +LYAD+Y DLVV DIS+  N +E+ RIE +F   + Y YY   +G++ D+ E QE  +V  +C     M   YY+           DM +A  E SN++G  S   GIGGS+A+FTI+NN+L+ ++++ +++ D+T    P+ G+ V++GWGIET+FPY D LF GA +GM+IYD S+P
Sbjct:   14 LLLFGCTDTCETISSYTYYEPVYMSLEDLRQSVKMEAAKEITQSGKIYFINDHILINEPNNGIHIINNEDPKNPENLGFINIPGNFDLAAVDGYLYADSYVDLVVFDISDIANPKEIKRIEEIFPNYNTYGYYVSEEGIVTDWIETQETSQVSTECDGSDRM---YYDWGYRWGGGIALDMAFA--ESSNTAGYASLSPGIGGSMAKFTISNNHLFMIDDWEMRIADLTTPSDPMLGSRVEIGWGIETVFPYDDMLFIGANNGMYIYDISSP 280          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: A0A1R3XP57_9BACT (LVIVD repeat-containing protein n=1 Tax=Pontibacter indicus TaxID=1317125 RepID=A0A1R3XP57_9BACT)

HSP 1 Score: 220 bits (560), Expect = 4.560e-66
Identity = 120/263 (45.63%), Postives = 168/263 (63.88%), Query Frame = 1
Query:    1 SLLAQGCKEACE-TEMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYY--YYTETQGLLI-DYAEVQ--EEVEVDC---GNGSIMPHYYYEDMLYASAELSNSSGGGSAGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            +LL   C + CE T   T +EP+Y+ ++++ +      A+ +  PGKIY K  YLFINEVDKG+H++DN + S+P  + FI +PGN D+A KG+ LYAD+Y DLV LDISN  +++ VNR+ENVF  Y+     +T  + I ++ E Q  +    DC   G G +      +   +ASA +   S   S G GGS+ARFTI+ ++LYTV+   L++ DI+ T  P +G  + LGWGIETIFPY DKLF G+ +GMHIYDNSNP
Sbjct:   21 ALLLSSCADECESTTTYTVFEPVYMLRADLQQAVKVAPAQTLREPGKIYAKGHYLFINEVDKGVHIVDNSNPSAPRFLSFITIPGNLDMAVKGNILYADSYIDLVALDISNPLDVRLVNRVENVFPTYFGMLVNDTASVFISEFVETQITQPPGTDCNSAGPGWLNGWMTMDGRSFASASVVQPSN--STGKGGSMARFTISGDHLYTVSNSDLQVLDISNTADPKKGEKIRLGWGIETIFPYADKLFIGSTTGMHIYDNSNP 281          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: E4TL84_MARTH (LVIVD repeat-containing protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) TaxID=643867 RepID=E4TL84_MARTH)

HSP 1 Score: 219 bits (559), Expect = 7.700e-66
Identity = 122/267 (45.69%), Postives = 174/267 (65.17%), Query Frame = 1
Query:   16 GCKEACETEMITY-YEPIYVEKSEVVKDAT-FEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYYYYTET-----QGLLIDYAEVQEEV--EVDCGNGSIMPHYYYE----DMLYA-----SAELSNSSGGGSAGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
             C++ CE E + Y Y+PI+ E  EV++++    + RPI N GKIY+KD YL++NE++KGIHVIDNRD S+P +I FI++PGN  LAAK   LYA++Y DL+  DISN  NI+E++R+E VF  Y YY  +     + +++D+  V+E    EVDC N      Y Y+    D LYA     +A +S ++    AG GGS+A FTI +NYLY ++   + L +I+  + P   + + +GWGIET+FPYGDKLF GA  GM+IYDN+ P
Sbjct:   23 SCEDQCEKESVYYLYQPIF-ETVEVIRESVEVNEPRPINNLGKIYFKDGYLYLNEIEKGIHVIDNRDPSNPQKIAFINIPGNFSLAAKDHVLYANSYMDLLSFDISNPNNIREIDRLEEVFMNYNYYASSFYQNERQVVVDWKFVEERTITEVDCSNA-----YGYDGRVIDGLYAFSDVSAARVSGNAASSGAGTGGSMATFTIYDNYLYGIDNDNVILANISNVEMPALHSKIRVGWGIETLFPYGDKLFIGANDGMYIYDNAEP 283          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: A0A6C0GFY6_9BACT (Uncharacterized protein n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GFY6_9BACT)

HSP 1 Score: 218 bits (556), Expect = 2.110e-65
Identity = 115/266 (43.23%), Postives = 166/266 (62.41%), Query Frame = 1
Query:    4 LLAQGCKEACE-TEMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYYYYTETQ-------GLLIDYAEVQEEVEVDCGNGSIMPHYY----YEDMLYASAELSNSSGGGSA-GIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            LL  GC++ CE T   T YEP+Y+   E+      + A P+   GKIY    YL +NE  KGIHV +N D S P  + FI++PGN D+A KG+ LYAD++ DLV LDIS+  NI EV+R++++F A+    +         G++ D+ + +     +C   +I P  +    Y  +  A A  S + GGGS  GIGGS+AR+TI +NYLYT+++  ++LFDI+    P   N++++GW IETIFPY DKLF G+++GMHIYDN+NP
Sbjct:   22 LLYSGCQDECERTLTYTLYEPVYLTFDELRSSVARQAAEPVREAGKIYIIGNYLLVNEPGKGIHVFNNSDPSKPENLAFINIPGNIDMAVKGNILYADSHVDLVALDISDPENIHEVSRVKDIFPAWTRTIQAGQQIDPSIGIITDWKQTRTTQISECNTANIQPFMWFGSSYAMLTDARANSSPAPGGGSKPGIGGSMARYTIYDNYLYTIDQANMQLFDISTPTQPFMMNAINIGWSIETIFPYKDKLFIGSQTGMHIYDNANP 287          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: A0A1N6YBE9_9BACT (Uncharacterized conserved protein n=3 Tax=Pontibacter TaxID=323449 RepID=A0A1N6YBE9_9BACT)

HSP 1 Score: 218 bits (554), Expect = 3.600e-65
Identity = 116/263 (44.11%), Postives = 168/263 (63.88%), Query Frame = 1
Query:    1 SLLAQGCKEACE-TEMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYY--YYTETQGLLI-DYAEVQ--EEVEVDC---GNGSIMPHYYYEDMLYASAELSNSSGGGSAGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            ++L   C + CE T     YEP+Y+ ++E+        A+ ++ PGKIY K  YLFINEV+KG+H++DN + S P  + FID+PGN D+A KG+ LYADNY DLV  DISN  +++ V+R+EN+F  Y+     +T  + I ++ E Q  +    DC   G G       ++   +AS  ++    G S+G GGS+ARFTI+ ++LYTV+   L++ DI+ T +P +G  + LGWGIETIFPY +KLF G+ +GMHIYDNSNP
Sbjct:   21 AMLLSSCSDECESTTTFIVYEPVYMLRTELKNAVKVTPAQTLKEPGKIYTKGHYLFINEVNKGVHIVDNSNPSLPRFLSFIDIPGNLDMAVKGNILYADNYIDLVAFDISNPLDVRLVSRVENIFPTYFGMVVNDTAAVFISEFVETQLKQPAGTDCSSAGPGWRNGWMTFDGRSFASTSVAQP--GNSSGKGGSMARFTISGDHLYTVSNSDLQVLDISNTSNPKKGEKIRLGWGIETIFPYDNKLFIGSTTGMHIYDNSNP 281          
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Match: A0A4P5TS76_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A4P5TS76_9BACT)

HSP 1 Score: 216 bits (550), Expect = 1.580e-64
Identity = 110/275 (40.00%), Postives = 171/275 (62.18%), Query Frame = 1
Query:    1 SLLAQGC-KEAC-ETEMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYKDEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNYTDLVVLDISNKTNIQEVNRIENVFDAYYYYT-----ETQGLLIDYAEVQEEVEVDC--------------GNGSIMPHYYYEDMLYASAELSNSSGGGSAGIGGSLARFTITNNYLYTVNEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYDNSNP 762
            ++L  GC K+ C +T    Y++P+Y+  +++ K      A  +++ GK+YYKD+++++NE++KGIHVIDN + S+P  I FI++PGN D+A KG+ LYAD+Y DLV +DI+N  ++ EVNR+  VF A  Y        ++G++ D+ E    V  DC              G G  M   +      +S+  + ++     GI GS+ARF I  N+LYT++++ +KLFDIT T +P+ G ++++ W IETIFPY DKLF G+ +G+ IYDNSNP
Sbjct:   12 TVLFTGCLKDKCSQTSAYKYFKPVYLSLTDLRKAVKTTAASDLKDVGKVYYKDQFIYVNEINKGIHVIDNHNPSAPQNIAFINIPGNVDMAVKGNILYADSYIDLVAIDITNPASVTEVNRVTEVFPARIYVNGYMGDASKGVITDWIERDTVVTQDCNIYNGGCFFGNQYEGGGIYMTEDFASTSALSSSSATTTTVSPGTGIAGSMARFCIYQNFLYTLDQWSMKLFDITNTSNPLAGTTINMSWNIETIFPYHDKLFIGSTNGVFIYDNSNP 286          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92317.21364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W2G6R1_9BACT3.270e-13578.46Uncharacterized conserved protein n=2 Tax=Reichenb... [more]
A0A5E8ARN3_9BACT3.750e-7244.89Uncharacterized protein n=2 Tax=Imperialibacter Ta... [more]
UPI001F600C2B1.120e-6747.86hypothetical protein n=1 Tax=Sabulibacter ruber Ta... [more]
UPI001E6376C31.710e-6646.64hypothetical protein n=1 Tax=Pontibacter sp. XAAS-... [more]
A0A2E8MU15_9RICK3.410e-6643.01Uncharacterized protein n=3 Tax=Bacteria TaxID=2 R... [more]
A0A1R3XP57_9BACT4.560e-6645.63LVIVD repeat-containing protein n=1 Tax=Pontibacte... [more]
E4TL84_MARTH7.700e-6645.69LVIVD repeat-containing protein n=1 Tax=Marivirga ... [more]
A0A6C0GFY6_9BACT2.110e-6543.23Uncharacterized protein n=1 Tax=Rhodocytophaga ros... [more]
A0A1N6YBE9_9BACT3.600e-6544.11Uncharacterized conserved protein n=3 Tax=Pontibac... [more]
A0A4P5TS76_9BACT1.580e-6440.00Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92317contigM-pyrifera_M_contig92317:3..764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score226.1
Seed ortholog evalue1.9e-56
Seed eggNOG ortholog643867.Ftrac_0211
Hectar predicted targeting categoryother localisation
EggNOG free text desc.LVIVD repeat
EggNOG OGs47K9R@768503,4NG4W@976,COG5276@1,COG5276@2
COG Functional cat.S
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
Exons1
Model size762
Cds size762
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816836.196831-CDS-M-pyrifera_M_contig92317:2..7641622816836.196831-CDS-M-pyrifera_M_contig92317:2..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92317 3..764 -
1692278207.0048926-CDS-M-pyrifera_M_contig92317:2..7641692278207.0048926-CDS-M-pyrifera_M_contig92317:2..764Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92317 3..764 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92317.21364.1prot_M-pyrifera_M_contig92317.21364.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92317 3..764 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92317.21364.1

>prot_M-pyrifera_M_contig92317.21364.1 ID=prot_M-pyrifera_M_contig92317.21364.1|Name=mRNA_M-pyrifera_M_contig92317.21364.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
SLLAQGCKEACETEMITYYEPIYVEKSEVVKDATFEKARPIENPGKIYYK
DEYLFINEVDKGIHVIDNRDHSSPMEIGFIDLPGNKDLAAKGDFLYADNY
TDLVVLDISNKTNIQEVNRIENVFDAYYYYTETQGLLIDYAEVQEEVEVD
CGNGSIMPHYYYEDMLYASAELSNSSGGGSAGIGGSLARFTITNNYLYTV
NEYRLKLFDITITDSPIEGNSVDLGWGIETIFPYGDKLFFGARSGMHIYD
NSNP
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mRNA from alignment at M-pyrifera_M_contig92317:3..764-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92317.21364.1 ID=mRNA_M-pyrifera_M_contig92317.21364.1|Name=mRNA_M-pyrifera_M_contig92317.21364.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig92317:3..764- (Macrocystis pyrifera P11B4 male)
TCGTTATTGGCACAAGGTTGCAAAGAGGCGTGTGAAACAGAAATGATAAC GTATTACGAGCCTATATATGTTGAAAAGTCTGAAGTGGTCAAAGATGCCA CGTTTGAAAAGGCAAGACCTATTGAAAACCCAGGAAAAATCTATTATAAG GACGAGTATTTATTCATCAACGAGGTAGACAAAGGGATTCATGTAATAGA CAACCGGGATCATTCAAGCCCTATGGAAATTGGTTTTATTGATTTACCGG GCAACAAAGATTTGGCAGCTAAAGGAGACTTTCTTTATGCGGATAACTAT ACCGATTTGGTGGTGCTGGATATCAGCAACAAAACCAATATTCAGGAGGT CAACAGGATCGAAAATGTATTTGATGCTTACTATTATTATACCGAAACCC AAGGACTTTTAATTGATTATGCTGAGGTGCAGGAAGAGGTGGAAGTTGAC TGTGGAAACGGAAGCATCATGCCTCATTATTATTACGAGGACATGCTGTA TGCCTCAGCCGAGTTATCAAATAGCTCCGGCGGAGGAAGTGCAGGTATAG GCGGGTCTTTGGCGCGGTTTACTATCACAAATAATTACCTATACACAGTC AATGAATACCGCCTAAAATTGTTTGATATCACGATCACCGATAGTCCCAT AGAAGGTAATTCAGTTGATTTGGGCTGGGGCATAGAGACCATTTTCCCCT ATGGGGACAAACTTTTCTTTGGAGCACGCAGCGGGATGCATATTTATGAC AATTCAAATCCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92317:3..764-

>mRNA_M-pyrifera_M_contig92317.21364.1 ID=mRNA_M-pyrifera_M_contig92317.21364.1|Name=mRNA_M-pyrifera_M_contig92317.21364.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig92317:3..764- (Macrocystis pyrifera P11B4 male)
TCGTTATTGGCACAAGGTTGCAAAGAGGCGTGTGAAACAGAAATGATAAC
GTATTACGAGCCTATATATGTTGAAAAGTCTGAAGTGGTCAAAGATGCCA
CGTTTGAAAAGGCAAGACCTATTGAAAACCCAGGAAAAATCTATTATAAG
GACGAGTATTTATTCATCAACGAGGTAGACAAAGGGATTCATGTAATAGA
CAACCGGGATCATTCAAGCCCTATGGAAATTGGTTTTATTGATTTACCGG
GCAACAAAGATTTGGCAGCTAAAGGAGACTTTCTTTATGCGGATAACTAT
ACCGATTTGGTGGTGCTGGATATCAGCAACAAAACCAATATTCAGGAGGT
CAACAGGATCGAAAATGTATTTGATGCTTACTATTATTATACCGAAACCC
AAGGACTTTTAATTGATTATGCTGAGGTGCAGGAAGAGGTGGAAGTTGAC
TGTGGAAACGGAAGCATCATGCCTCATTATTATTACGAGGACATGCTGTA
TGCCTCAGCCGAGTTATCAAATAGCTCCGGCGGAGGAAGTGCAGGTATAG
GCGGGTCTTTGGCGCGGTTTACTATCACAAATAATTACCTATACACAGTC
AATGAATACCGCCTAAAATTGTTTGATATCACGATCACCGATAGTCCCAT
AGAAGGTAATTCAGTTGATTTGGGCTGGGGCATAGAGACCATTTTCCCCT
ATGGGGACAAACTTTTCTTTGGAGCACGCAGCGGGATGCATATTTATGAC
AATTCAAATCCGTCGTTATTGGCACAAGGTTGCAAAGAGGCGTGTGAAAC
AGAAATGATAACGTATTACGAGCCTATATATGTTGAAAAGTCTGAAGTGG
TCAAAGATGCCACGTTTGAAAAGGCAAGACCTATTGAAAACCCAGGAAAA
ATCTATTATAAGGACGAGTATTTATTCATCAACGAGGTAGACAAAGGGAT
TCATGTAATAGACAACCGGGATCATTCAAGCCCTATGGAAATTGGTTTTA
TTGATTTACCGGGCAACAAAGATTTGGCAGCTAAAGGAGACTTTCTTTAT
GCGGATAACTATACCGATTTGGTGGTGCTGGATATCAGCAACAAAACCAA
TATTCAGGAGGTCAACAGGATCGAAAATGTATTTGATGCTTACTATTATT
ATACCGAAACCCAAGGACTTTTAATTGATTATGCTGAGGTGCAGGAAGAG
GTGGAAGTTGACTGTGGAAACGGAAGCATCATGCCTCATTATTATTACGA
GGACATGCTGTATGCCTCAGCCGAGTTATCAAATAGCTCCGGCGGAGGAA
GTGCAGGTATAGGCGGGTCTTTGGCGCGGTTTACTATCACAAATAATTAC
CTATACACAGTCAATGAATACCGCCTAAAATTGTTTGATATCACGATCAC
CGATAGTCCCATAGAAGGTAATTCAGTTGATTTGGGCTGGGGCATAGAGA
CCATTTTCCCCTATGGGGACAAACTTTTCTTTGGAGCACGCAGCGGGATG
CATATTTATGACAATTCAAATCCG
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