mRNA_M-pyrifera_M_contig92309.21361.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92309.21361.1
Unique NamemRNA_M-pyrifera_M_contig92309.21361.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: A0A1D8PTX3_CANAL (Protein-lysine N-methyltransferase n=3 Tax=Candida albicans TaxID=5476 RepID=A0A1D8PTX3_CANAL)

HSP 1 Score: 65.5 bits (158), Expect = 2.500e-10
Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPLAPVK 276
            D+ +L+PV+D+ NH+S+S V W V D+   F S+  +  G E+ NNYG K +E L L YGFC  + + D   L++ +  + +  ++
Sbjct:  223 DSAMLLPVVDLLNHNSKSKVHWDVSDNYFKFSSE-SIVPGKEIFNNYGLKGNEELLLAYGFCIENNSQDSVALKIKMPEEKIKAIE 307
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: A0A4P9ZB24_9ASCO (SET domain-containing protein n=1 Tax=Metschnikowia bicuspidata TaxID=27322 RepID=A0A4P9ZB24_9ASCO)

HSP 1 Score: 65.1 bits (157), Expect = 3.410e-10
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPLAPVKL 279
            D  +L+PV+D+ NHS R+ VTW V +    F +    G   ++ NNYG K +E L L YGFC AD + D   L++ V  + L  ++L
Sbjct:  221 DVAILIPVVDLLNHSPRAQVTWGVAEGHFVFEATGHAGG--QLFNNYGRKGNEELLLAYGFCLADNSADTVALKIKVPVELLPQLEL 305
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: A0A2P7YLU4_9ASCO (SET domain-containing protein n=3 Tax=Metschnikowiaceae incertae sedis TaxID=2937349 RepID=A0A2P7YLU4_9ASCO)

HSP 1 Score: 64.3 bits (155), Expect = 6.370e-10
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNV 249
            D+ VL+PV+D+ NHS  + V W V +D   F S   +  G ++ NNYG K +E L L YGFC  +   D   L++ V
Sbjct:  230 DSAVLLPVIDLLNHSPSAQVVWAVQNDQFVFSSSTPLKAGDQLFNNYGQKGNEELLLAYGFCIDNNEADSVALKVKV 306
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: B9WMU4_CANDC (Protein-lysine N-methyltransferase n=1 Tax=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) TaxID=573826 RepID=B9WMU4_CANDC)

HSP 1 Score: 63.2 bits (152), Expect = 1.620e-9
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPLAPVK 276
            D+ +L+PV+D+ NH+S+S V W + ++   F S+  +  G E+ NNYG K +E L L YGFC  +   D   L++ +  + +  ++
Sbjct:  223 DSAMLLPVVDLLNHNSKSKVHWDIFENHFKFGSE-SIEPGKEIFNNYGLKGNEELLLAYGFCIENNLQDSVALKIKMPEEKIKAIE 307
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: A0A8H7GYI8_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia persimmonesis TaxID=2053757 RepID=A0A8H7GYI8_9ASCO)

HSP 1 Score: 62.8 bits (151), Expect = 2.170e-9
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPL 264
            D  +LVPV+D+ NHS ++ VTW   D+   F S    G   E+ NNYG K +E L L YGFC  + + D   L++ V    L
Sbjct:  215 DVAMLVPVIDLLNHSPQANVTWTASDEFFEFQSHNNGGG--ELFNNYGRKGNEELLLAYGFCLENNSADTVALKIKVPEQML 294
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: A0A4P6XMB9_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia aff. pulcherrima TaxID=2163413 RepID=A0A4P6XMB9_9ASCO)

HSP 1 Score: 62.8 bits (151), Expect = 2.210e-9
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPL 264
            D  +LVPV+D+ NHS ++ VTW   D+   F S    G   E+ NNYG K +E L L YGFC  + + D   L++ V    L
Sbjct:  227 DVAMLVPVIDLLNHSPQANVTWTASDEYFEFQSHNNGGG--ELFNNYGRKGNEELLLAYGFCLENNSADTVALKIKVPEQML 306
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: A0A1A0HG70_9ASCO (SET domain-containing protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HG70_9ASCO)

HSP 1 Score: 60.5 bits (145), Expect = 1.440e-8
Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPL 264
            D  +L+PV+D+ NHS ++ VTW    +   F S      G E+ NNYG K +E L L YGFC  + A D   L++ V    L
Sbjct:  229 DVAMLIPVVDLLNHSPQADVTWTASGNFFQFQSHR--NGGLELFNNYGRKGNEELLLAYGFCLDNNAADTVALKIKVPEQML 308
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BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: R9XKE9_ASHAC (AaceriAFL100Wp n=1 Tax=Ashbya aceri TaxID=566037 RepID=R9XKE9_ASHAC)

HSP 1 Score: 57.8 bits (138), Expect = 1.270e-7
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 1 
Query:   28 VLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRL 243
            VL+PVLD+ NHS+ + V W    DG +      + +G EV NNYG KS+E L L YGF   D   DH  LR+
Sbjct:  226 VLLPVLDLLNHSTDARVEWS-GKDGFTIRQLEPLRKGQEVCNNYGGKSNEELLLGYGFAMEDNLFDHVALRV 296
[Close]
BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: Q755C3_ASHGO (Protein-lysine N-methyltransferase n=1 Tax=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) TaxID=284811 RepID=Q755C3_ASHGO)

HSP 1 Score: 57.4 bits (137), Expect = 1.740e-7
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 1 
Query:   28 VLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRL 243
            VL+PVLD+ NHS+ + V W    DG +      + +G EV NNYG KS+E L L YGF   D   DH  LR+
Sbjct:  226 VLLPVLDLLNHSTDARVEWS-GKDGFTIRQLQPLRQGQEVCNNYGGKSNEELMLGYGFAIEDNLFDHVALRV 296
[Close]
BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Match: A0A512UIV9_9ASCO (SET domain-containing protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UIV9_9ASCO)

HSP 1 Score: 57.0 bits (136), Expect = 2.380e-7
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 1 
Query:   19 DAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVLNNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPL 264
            D  +L+PV+D+ NHS ++ VTW   ++   F S        E+ NNYG K +E L L YGFC  + + D   L++ V +  L
Sbjct:  229 DVTMLIPVIDLLNHSPQADVTWTASNNYFQFQSHN--NNTDELFNNYGRKGNEELLLAYGFCLENNSADTVALKIKVPQQLL 308
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92309.21361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A1D8PTX3_CANAL2.500e-1036.05Protein-lysine N-methyltransferase n=3 Tax=Candida... [more]
A0A4P9ZB24_9ASCO3.410e-1039.08SET domain-containing protein n=1 Tax=Metschnikowi... [more]
A0A2P7YLU4_9ASCO6.370e-1040.26SET domain-containing protein n=3 Tax=Metschnikowi... [more]
B9WMU4_CANDC1.620e-933.72Protein-lysine N-methyltransferase n=1 Tax=Candida... [more]
A0A8H7GYI8_9ASCO2.170e-940.24Uncharacterized protein n=1 Tax=Metschnikowia pers... [more]
A0A4P6XMB9_9ASCO2.210e-940.24Uncharacterized protein n=1 Tax=Metschnikowia aff.... [more]
A0A1A0HG70_9ASCO1.440e-839.02SET domain-containing protein n=1 Tax=Metschnikowi... [more]
R9XKE9_ASHAC1.270e-745.83AaceriAFL100Wp n=1 Tax=Ashbya aceri TaxID=566037 R... [more]
Q755C3_ASHGO1.740e-745.83Protein-lysine N-methyltransferase n=1 Tax=Ashbya ... [more]
A0A512UIV9_9ASCO2.380e-736.59SET domain-containing protein n=1 Tax=Metschnikowi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92309contigM-pyrifera_M_contig92309:428..718 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score75.1
Seed ortholog evalue2e-11
Seed eggNOG ortholog192875.XP_004365514.1
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018026,GO:0018027,GO:0018193,GO:0018205,GO:0019538,GO:0022613,GO:0031974,GO:0031981,GO:0032259,GO:0036211,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.Set domain-containing protein
EggNOG OGs3A3XS@33154,KOG1337@1,KOG1337@2759
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons1
Model size291
Cds size291
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816836.0744412-CDS-M-pyrifera_M_contig92309:427..7181622816836.0744412-CDS-M-pyrifera_M_contig92309:427..718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92309 428..718 -
1692278206.9508877-CDS-M-pyrifera_M_contig92309:427..7181692278206.9508877-CDS-M-pyrifera_M_contig92309:427..718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92309 428..718 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92309.21361.1prot_M-pyrifera_M_contig92309.21361.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92309 428..718 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92309.21361.1

>prot_M-pyrifera_M_contig92309.21361.1 ID=prot_M-pyrifera_M_contig92309.21361.1|Name=mRNA_M-pyrifera_M_contig92309.21361.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
RVQGAADAGVLVPVLDMANHSSRSAVTWRVHDDGVSFHSDVGVGRGCEVL
NNYGCKSSEALSLCYGFCGADPAGDHTLLRLNVARDPLAPVKLAMLQ
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mRNA from alignment at M-pyrifera_M_contig92309:428..718-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92309.21361.1 ID=mRNA_M-pyrifera_M_contig92309.21361.1|Name=mRNA_M-pyrifera_M_contig92309.21361.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig92309:428..718- (Macrocystis pyrifera P11B4 male)
CGCGTGCAGGGCGCGGCGGATGCGGGAGTGCTGGTGCCGGTGCTGGACAT
GGCGAACCACAGCTCCCGGTCTGCGGTGACGTGGCGGGTGCACGACGACG
GCGTGTCGTTCCACAGCGACGTGGGGGTGGGCAGGGGGTGCGAGGTGCTG
AACAACTACGGCTGCAAGAGCAGCGAGGCGCTGTCGCTGTGCTACGGCTT
CTGCGGAGCAGACCCGGCCGGGGACCACACGCTGCTGCGTCTGAACGTCG
CCCGTGATCCTCTGGCGCCGGTGAAGCTCGCCATGCTCCAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92309:428..718-

>mRNA_M-pyrifera_M_contig92309.21361.1 ID=mRNA_M-pyrifera_M_contig92309.21361.1|Name=mRNA_M-pyrifera_M_contig92309.21361.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig92309:428..718- (Macrocystis pyrifera P11B4 male)
CGCGTGCAGGGCGCGGCGGATGCGGGAGTGCTGGTGCCGGTGCTGGACAT
GGCGAACCACAGCTCCCGGTCTGCGGTGACGTGGCGGGTGCACGACGACG
GCGTGTCGTTCCACAGCGACGTGGGGGTGGGCAGGGGGTGCGAGGTGCTG
AACAACTACGGCTGCAAGAGCAGCGAGGCGCTGTCGCTGTGCTACGGCTT
CTGCGGAGCAGACCCGGCCGGGGACCACACGCTGCTGCGTCTGAACGTCG
CCCGTGATCCTCTGGCGCCGGTGAAGCTCGCCATGCTCCAACGCGTGCAG
GGCGCGGCGGATGCGGGAGTGCTGGTGCCGGTGCTGGACATGGCGAACCA
CAGCTCCCGGTCTGCGGTGACGTGGCGGGTGCACGACGACGGCGTGTCGT
TCCACAGCGACGTGGGGGTGGGCAGGGGGTGCGAGGTGCTGAACAACTAC
GGCTGCAAGAGCAGCGAGGCGCTGTCGCTGTGCTACGGCTTCTGCGGAGC
AGACCCGGCCGGGGACCACACGCTGCTGCGTCTGAACGTCGCCCGTGATC
CTCTGGCGCCGGTGAAGCTCGCCATGCTCCAA
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