mRNA_M-pyrifera_M_contig92230.21349.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: R1DRZ0_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRZ0_EMIHU) HSP 1 Score: 108 bits (270), Expect = 9.060e-26 Identity = 59/117 (50.43%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 22 TALFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECLSK-VRAVFQVDLE 369 +A+ IAWERALESKRPDALF DPLAE L G GE S F ++S FG DW+ +H+ W AVRT +ID + + Q+VNLGAG+ TRPYRLEC F VD++ Sbjct: 14 SAMMIAWERALESKRPDALFVDPLAEALAGTKGETLSAGFGNMSQMFGFEDWAAFHKTWVAVRTRFIDDRVKEC------ACGFKQLVNLGAGMDTRPYRLECYKAFANGSFNVDMK 124
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A7S2HZJ2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HZJ2_9EUKA) HSP 1 Score: 102 bits (254), Expect = 7.640e-25 Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 22 TALFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLEC 330 +A+ IAWER+LES RPDALF DP A L + GEA S F + ++ FGL DW E+H+ WT+VRT YID +V + Q+VNLGAG+ TR YRL C Sbjct: 56 SAMMIAWERSLESARPDALFHDPFAAALASDKGEALSEGFGANAALFGLADWPEFHKTWTSVRTKYID----DTVTRHASTGRFRQLVNLGAGMDTRAYRLPC 154
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A7S4MHH4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MHH4_9EUKA) HSP 1 Score: 104 bits (260), Expect = 2.430e-24 Identity = 58/142 (40.85%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 4 MSASEKTALFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECLSKVRA-VFQVDLENMTKFRQRALASLDDIEPL 426 +S KT+L IA+ER+LE +R + LFSDP A L G +G S A+ ++ FG +W ++H+ WT VRT +ID++L + A ++++ Q++NLGAG+ +R YRLECL V+++DL + + ++ LA L+ IEPL Sbjct: 32 LSNVNKTSLMIAYERSLEEQRENPLFSDPFAAALAGTAGVTFSEGMAANAAMFGFPEWPDFHRTWTGVRTAFIDQFLIK--QTASNTSDSFQLLNLGAGMDSRTYRLECLKNSGTKVWEIDLPAVNEIKEEVLAKLN-IEPL 170
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A7S4QP10_9DINO (Hypothetical protein n=4 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QP10_9DINO) HSP 1 Score: 102 bits (254), Expect = 1.830e-23 Identity = 63/147 (42.86%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 22 TALFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECL-SKVRAVFQVDLENMTKFRQRALAS-LDDIEPLARSIVDISYD 456 +A IA+ERALES RPDALF DP A+ + G GE S F + S FGL W E+H+ WTAVRT +ID + E+A + Q+VNLGAG+ TR YRLEC S F+VD+E + + + L + P + ++S D Sbjct: 29 SAKMIAYERALESGRPDALFQDPFAKAMAGPKGEMLSEAFGANCSYFGLDGWPEFHKMWTAVRTRFIDDCI---AEHAA-TGRFPQLVNLGAGLDTRAYRLECYKSFANGSFEVDMETVNAGKAKVFRDCLGEPSPRCGQVHNVSLD 171
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A1Q9E238_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E238_SYMMI) HSP 1 Score: 100 bits (249), Expect = 9.530e-23 Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 1 EMSASEKTALFIAWERALESKR-PDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECLSKVRAVFQVD 363 E+S +TA +A ERALE+ R DALFSDP A+ L G+ G S K ++ FG +W E+H+ WT VRT +ID + G + Q+VNLGAGV TRPYRLE SK++A ++VD Sbjct: 18 EVSVVGRTAFMVAAERALETDRGKDALFSDPFAKVLAGKDGREMSDKLGEAAAQFGFENWPEFHKVWTVVRTKFIDDII-------GSLTDQKQMVNLGAGVDTRPYRLEGYSKLKASYEVD 132
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A812T239_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812T239_9DINO) HSP 1 Score: 100 bits (248), Expect = 1.310e-21 Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 1 EMSASEKTALFIAWERALESKR-PDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECLSKVRAVFQVD 363 E+S +TA +A ERALE+ R DALFSDP A+ L G+ G S K ++ FG +W E+H+ WT VRT +ID + G + Q+VNLGAGV TRPYRLE SK++A +++D Sbjct: 293 EVSVVGRTAFMVAAERALETDRGKDALFSDPFAKVLAGKDGHEMSDKLGEAAAQFGFENWPEFHKVWTVVRTRFIDDII-------GSLTDQKQMVNLGAGVDTRPYRLEGYSKLKASYEID 407
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A812JNB6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JNB6_9DINO) HSP 1 Score: 96.7 bits (239), Expect = 1.990e-20 Identity = 55/122 (45.08%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 1 EMSASEKTALFIAWERALESKRP-DALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECLSKVRAVFQVD 363 E+S +TA +A ERA+E+ R DALF DP A+ L G+ G S K ++ FG W E+H+ WT VRT +ID + G + Q+VNLGAGV TRPYRLE SK++A ++VD Sbjct: 319 EVSVVGRTAFMVAAERAIETDREKDALFVDPFAKVLAGKDGHEMSDKLGEAAAQFGFEGWPEFHKVWTVVRTKFIDDII-------GSLTDQKQMVNLGAGVDTRPYRLEGYSKLKASYEVD 433
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A7S2IC03_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2IC03_9DINO) HSP 1 Score: 89.7 bits (221), Expect = 7.050e-19 Identity = 52/126 (41.27%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 28 LFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECLSKVRA-VFQVDLENMTKFRQRALA 402 + +A+ERALE+ RPDALF DP A + + G+ S GL W E+HQ WTAVRT +ID+ V + Q VNLGAG+ TR YRL+C R F+VD+E + ++R A Sbjct: 1 MMVAYERALETWRPDALFQDPFAIAMATDKGKMLSETVCERCGKVGLAGWPEFHQMWTAVRTKFIDQ----RVAELAATDSFTQFVNLGAGLDTRAYRLQCFLAFRGGCFEVDMEVVNNGKRRIFA 122
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A7S1PN47_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1PN47_ALECA) HSP 1 Score: 84.7 bits (208), Expect = 2.280e-18 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 22 TALFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAVRTTYID 225 +A+ IAWER+LES+RPDALF DPLA L G GE+ SG F ++S FG DW +H+ W AVRT +ID Sbjct: 38 SAMMIAWERSLESQRPDALFDDPLAAALAGTKGESLSGSFEAMSKTFGFEDWGGFHKTWVAVRTRFID 105
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Match: A0A1V9FWK1_9BACT (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Niastella vici TaxID=1703345 RepID=A0A1V9FWK1_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 7.090e-15 Identity = 61/146 (41.78%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 22 TALFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSSAFGLGDWSEYHQQWTAV-RTTYIDRWLNTSVENAGDSAEHLQVVNLGAGVCTRPYRLECLSKVRAVFQVDLENMTKFRQRALASLDDIEPLARSIVDISYD 456 TAL+IA RALES+RPDA+F DPLA KL GE G F V+ A + D H + V RTT IDR +N ++E D+ V+NLGAG+ TRPYR+ +R V +VD +M ++ + L + L R D+S D Sbjct: 12 TALWIAAYRALESERPDAVFKDPLARKLAGERG------FQMVA-ATPIKD----HMSFAMVTRTTGIDRLINIAIERGIDT-----VINLGAGLDTRPYRMPLPVNLRWV-EVDFPHMIDYKNKLLENEKPACHLQRLAADLSND 140 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92230.21349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig92230.21349.1 >prot_M-pyrifera_M_contig92230.21349.1 ID=prot_M-pyrifera_M_contig92230.21349.1|Name=mRNA_M-pyrifera_M_contig92230.21349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp MSASEKTALFIAWERALESKRPDALFSDPLAEKLVGESGEASSGKFASVSback to top mRNA from alignment at M-pyrifera_M_contig92230:312..767+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig92230.21349.1 ID=mRNA_M-pyrifera_M_contig92230.21349.1|Name=mRNA_M-pyrifera_M_contig92230.21349.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig92230:312..767+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig92230:312..767+ >mRNA_M-pyrifera_M_contig92230.21349.1 ID=mRNA_M-pyrifera_M_contig92230.21349.1|Name=mRNA_M-pyrifera_M_contig92230.21349.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig92230:312..767+ (Macrocystis pyrifera P11B4 male)back to top |