mRNA_M-pyrifera_M_contig92225.21348.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92225.21348.1
Unique NamemRNA_M-pyrifera_M_contig92225.21348.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A024TUF0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUF0_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.220e-71
Identity = 128/248 (51.61%), Postives = 168/248 (67.74%), Query Frame = 1 
Query:   10 YYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASL 753
            Y+  LGP G R D ++RPELR G VE+ A +EY++RPP PP YVF+IDVS  AVASGML  AT+ IK  LD LPG  R ++ FIT+D++VHFY L    + P M+ VPD++ L     F+P PD+LL NL+ +R  V+ALLD LP A + TR  DT LG A+RAA  ++  VGGK+ +FQ++LPT G+G+LK R  +      G+  +  LL PVD FY+  A+E CR Q+  DTFLF+P YTD ASL
Sbjct:  394 YFCHLGPDGLRQDKDERPELRSGSVEIVASSEYMMRPPTPPVYVFVIDVSAQAVASGMLAVATDTIKHELDNLPGAPRTRVGFITFDNAVHFYNLKAGLNSPQMMVVPDINEL-----FIPIPDELLVNLSDSRELVEALLDMLPRAHQNTRNPDTCLGPAIRAAFRLMTSVGGKMLVFQSSLPTAGQGSLKHREDSRV---LGSNKEHDLLNPVDTFYRKNAIEFCRQQVSVDTFLFSPQYTDYASL 633
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A7S1CB04_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB04_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.810e-70
Identity = 127/252 (50.40%), Postives = 165/252 (65.48%), Query Frame = 1 
Query:    1 PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASLS 756
            P  Y+APL   G R D  +RPEL RG VE  AP+EY+VRPPQ P Y+F+IDVSY+AVASG +    EAIK+SLD LPG  R Q+ F+TYDS++HFY L      P ML V D++       FLP PDDLL NL+ +R  VDALLDSLP  F GT  V++ +G AL +A  V++ +GGK+ + Q +LP+LG G L+ R  A      G + +  +L   D FYK++A+E  + QI CD FL +P YTDVA+LS
Sbjct:  285 PSAYFAPLDDKGVRTDVAERPELSRGSVEFVAPSEYMVRPPQAPVYMFVIDVSYNAVASGAVAATVEAIKASLDSLPGEARTQVGFLTYDSTIHFYNLKSTLSAPQMLVVSDIA-----EPFLPVPDDLLVNLSDSRTVVDALLDSLPDMFAGTSIVESCMGPALLSAHAVMKHIGGKMIVLQASLPSLGPGKLRHRENAKL---LGTDSEHSMLNAEDPFYKNQAIEFSKVQISCDLFLTSPSYTDVATLS 528
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: W4GMY2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMY2_9STRA)

HSP 1 Score: 241 bits (615), Expect = 7.890e-70
Identity = 126/248 (50.81%), Postives = 164/248 (66.13%), Query Frame = 1 
Query:   10 YYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASL 753
            Y+  LGP G R D ++RPELR G VE+ A +EY++RPP PP YVF+IDVS  AVASGML    + IK  LD LPG  R ++ FIT+D++VHFY L      P M+ VPD++ L     F+P PD+LL NL+ +R  V+ALLD LP A + TR  DT LG A+RAA  ++  VGGK+ +FQ++LPT G+G+LK R  +      G   +  LL PVD FY+  A+E CR Q+  DTFLF+P YTD ASL
Sbjct:  390 YFCHLGPDGLRQDKDERPELRSGAVEIVASSEYMMRPPTPPVYVFVIDVSAQAVASGMLAVCADTIKRELDNLPGAPRTRVGFITFDNAVHFYNLKAGLTSPQMMVVPDINEL-----FIPIPDELLVNLSDSRELVEALLDMLPRAHQSTRNPDTCLGPAIRAAFRLMTSVGGKMLVFQSSLPTAGQGSLKHREDSRV---LGTNKEHDLLNPVDTFYRKNAIEFCRQQVSVDTFLFSPQYTDYASL 629
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A067CLK6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLK6_SAPPC)

HSP 1 Score: 239 bits (611), Expect = 2.220e-69
Identity = 129/252 (51.19%), Postives = 168/252 (66.67%), Query Frame = 1 
Query:    1 PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASLS 756
            P  Y+  L   G R D ++RPELR G VE+ AP+EY VRPP PP++VF+IDVS  AVASGM+Q A E I + LD LPG  R +   ITYDS+VHFY L      P M+ VPD++ L     F+P PD+LL NL+ +R  V++LL+ LP   +GTR  DT LG A+RAA  ++  +GGK+ +FQ++LPT G+GALK R         G+E ++ LL PVD FY+  A+E CR Q+  DTFLFAP YTDVASL+
Sbjct:  356 PSSYFCHLNANGVRHDIDERPELR-GSVEIIAPSEYTVRPPIPPAFVFVIDVSAQAVASGMVQVAAETILAQLDNLPGDGRTRFGLITYDSAVHFYNLKAGLKAPQMMVVPDINEL-----FIPIPDELLVNLSDSRDVVESLLEMLPRMHQGTRNPDTCLGPAIRAAFRLMTALGGKMLVFQSSLPTTGQGALKHRDDPRL---LGSEKEQSLLNPVDTFYRKNAIEFCRQQVSVDTFLFAPQYTDVASLA 598
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: T0QMG2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QMG2_SAPDV)

HSP 1 Score: 236 bits (602), Expect = 6.800e-69
Identity = 125/251 (49.80%), Postives = 164/251 (65.34%), Query Frame = 1 
Query:    1 PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASL 753
            P  Y+  LGP G R D ++RPEL  G VE+ A +EY++RPP PP YVF+IDVS  A+ASGM+Q A E I+S LD LPG  R +   ITYDS+VHFY L      P M+ VPD++ L     F+P PD+LL NL+ +R  +++LL+ LP   +GTR  DT LG A+RAA  ++  VGGK+ +FQ++LPT G+GALK R         G + +  LL  VD FY+  A+E CR Q+  DTFLF+P YTD ASL
Sbjct:  179 PSSYFCHLGPDGQRQDKDERPELC-GSVEIVASSEYMMRPPTPPVYVFVIDVSAQAIASGMVQVAAETIQSQLDSLPGDPRTRFGLITYDSAVHFYNLKAGLKTPQMMIVPDINEL-----FIPIPDELLVNLSDSRDVIESLLEMLPRMHQGTRNPDTCLGPAIRAAFRLMTSVGGKMLVFQSSLPTAGQGALKHREDTRL---LGTDKEHNLLNAVDTFYRKNAIEFCRQQVSVDTFLFSPQYTDFASL 420
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A067FFM4_CITSI (Uncharacterized protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FFM4_CITSI)

HSP 1 Score: 228 bits (582), Expect = 8.390e-69
Identity = 121/251 (48.21%), Postives = 158/251 (62.95%), Query Frame = 1 
Query:    1 PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASL 753
            P  Y+A L  TG R+D + RPEL +G VE  AP EY+VRPP PP Y FLIDVS  A+ SGML+   + IKS LD LPG  R QI FIT+DS++HFY +     +P M+ + DL     D  F+P PDDLL NL+ +R  VD LLDSLPS F+    V++A G AL+AA  V+ R+GGKL +FQ +LP+LG G LK R         G + +  L +P D FYK  A ++ + QI  + + F+  YTD+ASL
Sbjct:   30 PGDYFAHLDATGRRIDIDQRPELTKGSVEFVAPTEYMVRPPMPPLYFFLIDVSISAIRSGMLEVVAQTIKSCLDELPGFPRTQIGFITFDSTIHFYNMKSSLTQPQMMVISDL-----DDIFVPLPDDLLVNLSESRSVVDTLLDSLPSMFQDNMNVESAFGPALKAAFMVMSRLGGKLLIFQNSLPSLGVGCLKLRGDDLR--VYGTDKEHSLRIPEDPFYKQMAADLTKFQIAVNVYAFSDKYTDIASL 273
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A485LDM8_9STRA (Aste57867_19172 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDM8_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.730e-68
Identity = 125/248 (50.40%), Postives = 164/248 (66.13%), Query Frame = 1 
Query:   10 YYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASL 753
            Y+  LGP G R D ++RPELR G VE+ A +EY++RPP PP +VF+IDVS  AVASGM+  A + IK  LD LPG  R +I FIT+DSSVHFY L      P M+ VPD++ L     F+P PD+LL NL+ +R  V++LLD LP     TR  DT LG A+RAA  ++  VGGK+ +FQ++LPT+G+G+LK R         G+  +  LL PVD FY+  A+E CR Q+  DTFLF+P YTD AS+
Sbjct: 1068 YFCHLGPDGLRQDKDERPELRSGCVEIVASSEYMMRPPTPPVFVFVIDVSAQAVASGMVAVAADTIKRELDNLPGAPRTRIGFITFDSSVHFYNLKAGLSSPQMMVVPDINEL-----FIPIPDELLVNLSDSRDVVESLLDMLPRVHANTRNPDTCLGPAIRAAFRLMTSVGGKMLVFQSSLPTVGQGSLKHREDTRL---LGSNKEHDLLNPVDTFYRKNAIEFCRQQVSVDTFLFSPQYTDYASI 1307
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A1V9YHI7_9STRA (Protein transporter Sec24 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YHI7_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.750e-68
Identity = 127/251 (50.60%), Postives = 163/251 (64.94%), Query Frame = 1 
Query:    1 PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASL 753
            P  Y+  LGP G R D ++RPEL  G VE+ A +EY++RPP PP YVF+IDVS  AVASGML  AT  I+  LD LPG  R +   ITYDSSVHFY L      P M+ VPD++ L     F+P PD+LL NL+ +R  +D+LL+ LP   +G R  DT LG A+RAA  ++  VGGK+ +FQ++LPT G+GALK R         G++ +  LL PVD FY+  A+E CR Q+  DTFLF+P YTD ASL
Sbjct:  373 PSSYFCHLGPDGLRQDKDERPELC-GSVEIVASSEYMMRPPTPPVYVFVIDVSAQAVASGMLDVATNTIREQLDNLPGDPRTRFGLITYDSSVHFYNLKAGLKTPQMMIVPDINEL-----FIPIPDELLVNLSDSRDVIDSLLEMLPRMHQGARNPDTCLGPAIRAAFRLMTSVGGKMLVFQSSLPTAGQGALKHREDPRM---LGSDKEHNLLNPVDTFYRKNAIEFCRQQVSVDTFLFSPQYTDFASL 614
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A1V9YBP8_9STRA (Protein transporter Sec24 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBP8_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.910e-68
Identity = 129/252 (51.19%), Postives = 163/252 (64.68%), Query Frame = 1 
Query:    1 PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASLS 756
            P  Y+  LGP G R D  +RPELR G VE+ AP+EY VRPP PP++VF+IDVS  AVASGML  A   I+  LD LPG  R +   ITYDSSVHFY L      P M+ VPD+  L     F+P PD+LL NL+ +R  VD+LL+ LP   +G R  DT LG A+RAA  +L  +GGK+ +FQ++LPT G+GALK R         G++ ++ LL PVD FY+  A+E CR QI  DTFLF+  YTD ASL+
Sbjct:  358 PSSYFCHLGPDGVRQDIAERPELR-GSVEIVAPSEYTVRPPIPPAFVFVIDVSAQAVASGMLDVAANTIREQLDNLPGDPRTRFGLITYDSSVHFYNLKAGLKAPQMMVVPDVEEL-----FIPIPDELLVNLSDSRDVVDSLLEMLPRMHQGARNPDTCLGPAIRAAFRLLTAMGGKMLVFQSSLPTTGQGALKHREDPRM---LGSDKEQSLLNPVDTFYRKNAIEFCRQQISVDTFLFSSTYTDAASLA 600
[Close]
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Match: A0A2D4BP64_PYTIN (Putative vesicle coat complex COPII subunit SEC24/subunit SFB2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP64_PYTIN)

HSP 1 Score: 236 bits (603), Expect = 5.430e-68
Identity = 122/251 (48.61%), Postives = 161/251 (64.14%), Query Frame = 1 
Query:    1 PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLIDVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNGDSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSAFEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGAAAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVASL 753
            P  Y+  LGP   R D E+RPEL  G VE+ AP+EY++RPPQPP Y+F+IDVS  AV+SG +Q A E IK  LD LPG  R ++ F+TYDS++HFY L      P M+ + DL  L     F+P PDDLL NL+ +R  VDALLDSLP+  +  R  +TALG A+R A  ++  +GGK+ +FQ++LPT G GALK R         G + +  LL   D FY+  A++ CR Q+  DTFLF+  YTDVA+L
Sbjct:  444 PSSYFCHLGPNQQRQDREERPELNCGSVEIVAPSEYMMRPPQPPCYMFVIDVSAPAVSSGAVQIAVETIKEQLDNLPGAPRTRVGFLTYDSTIHFYNLKSTLKTPQMMVIADLEEL-----FIPIPDDLLVNLSDSREVVDALLDSLPAIHQNARSAETALGPAIRVAFKLMSSIGGKMMVFQSSLPTSGVGALKHRDNPRL---IGTDKEHSLLNAADTFYRSNAIDFCRQQVSVDTFLFSSQYTDVATL 686
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92225.21348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024TUF0_9STRA1.220e-7151.61Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S1CB04_9STRA2.810e-7050.40Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
W4GMY2_9STRA7.890e-7050.81Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A067CLK6_SAPPC2.220e-6951.19Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
T0QMG2_SAPDV6.800e-6949.80Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067FFM4_CITSI8.390e-6948.21Uncharacterized protein (Fragment) n=1 Tax=Citrus ... [more]
A0A485LDM8_9STRA1.730e-6850.40Aste57867_19172 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YHI7_9STRA1.750e-6850.60Protein transporter Sec24 n=1 Tax=Achlya hypogyna ... [more]
A0A1V9YBP8_9STRA2.910e-6851.19Protein transporter Sec24 n=1 Tax=Achlya hypogyna ... [more]
A0A2D4BP64_PYTIN5.430e-6848.61Putative vesicle coat complex COPII subunit SEC24/... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92225contigM-pyrifera_M_contig92225:12..767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.8
Seed ortholog evalue2.6e-63
Seed eggNOG ortholog157072.XP_008873355.1
Preferred nameSEC24B
KEGG koko:K14007
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0002791,GO:0002793,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0019222,GO:0019882,GO:0019884,GO:0019886,GO:0022607,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031323,GO:0031410,GO:0031982,GO:0031984,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0034613,GO:0034622,GO:0035459,GO:0042175,GO:0042277,GO:0042592,GO:0042632,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045714,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048475,GO:0048518,GO:0048522,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051246,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051668,GO:0055088,GO:0055092,GO:0060255,GO:0061024,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070971,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0090110,GO:0090114,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:1903530,GO:1903532,GO:1904951
EggNOG free text desc.ER to Golgi vesicle-mediated transport
EggNOG OGsCOG5028@1,KOG1985@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Exons1
Model size756
Cds size756
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816835.2239995-CDS-M-pyrifera_M_contig92225:11..7671622816835.2239995-CDS-M-pyrifera_M_contig92225:11..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92225 12..767 +
1692278206.5056922-CDS-M-pyrifera_M_contig92225:11..7671692278206.5056922-CDS-M-pyrifera_M_contig92225:11..767Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92225 12..767 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92225.21348.1prot_M-pyrifera_M_contig92225.21348.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92225 12..767 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92225.21348.1

>prot_M-pyrifera_M_contig92225.21348.1 ID=prot_M-pyrifera_M_contig92225.21348.1|Name=mRNA_M-pyrifera_M_contig92225.21348.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
PDVYYAPLGPTGDRVDTEDRPELRRGQVEVEAPAEYLVRPPQPPSYVFLI
DVSYHAVASGMLQCATEAIKSSLDRLPGGERAQISFITYDSSVHFYRLNG
DSDRPHMLSVPDLSLLSKDSTFLPQPDDLLCNLASARGAVDALLDSLPSA
FEGTRCVDTALGAALRAALGVLRRVGGKLCLFQTALPTLGEGALKPRSGA
AAGGARGAEGQRKLLLPVDNFYKHRAVEMCRHQICCDTFLFAPHYTDVAS
LS
back to top

mRNA from alignment at M-pyrifera_M_contig92225:12..767+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92225.21348.1 ID=mRNA_M-pyrifera_M_contig92225.21348.1|Name=mRNA_M-pyrifera_M_contig92225.21348.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig92225:12..767+ (Macrocystis pyrifera P11B4 male)
CCCGACGTGTACTACGCGCCGCTGGGCCCCACGGGTGACCGGGTGGACAC
GGAGGACCGGCCGGAGCTGCGGCGCGGGCAGGTGGAGGTGGAGGCGCCGG
CCGAGTACCTGGTGAGGCCGCCGCAGCCGCCGTCGTACGTCTTCCTCATC
GACGTGTCGTACCACGCGGTGGCCAGCGGCATGCTGCAGTGCGCGACGGA
GGCGATCAAGTCGTCGCTGGATCGGCTGCCCGGCGGCGAGCGCGCCCAGA
TCAGCTTCATCACCTACGACTCCTCCGTGCACTTTTACCGGCTGAACGGT
GACTCGGACCGGCCGCACATGCTCAGCGTGCCCGACCTGTCGCTGCTGTC
CAAAGACAGCACCTTCCTGCCGCAGCCGGACGACCTGCTGTGCAACCTGG
CCAGCGCGCGCGGGGCGGTGGACGCGCTGCTCGACTCGCTGCCGTCTGCG
TTCGAGGGCACGCGCTGCGTGGACACCGCGCTGGGCGCCGCTCTGCGCGC
CGCGTTGGGCGTGCTGCGCCGTGTAGGTGGCAAGCTGTGCCTGTTCCAGA
CGGCGCTGCCGACGCTGGGCGAGGGCGCGCTGAAGCCCCGGTCGGGCGCC
GCCGCCGGCGGCGCGCGCGGCGCGGAGGGCCAGCGCAAGCTGCTGCTGCC
GGTGGACAACTTTTACAAGCACCGTGCGGTGGAGATGTGCCGGCACCAGA
TCTGCTGCGACACGTTCCTCTTCGCGCCGCACTACACGGACGTCGCCTCG
CTGTCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig92225:12..767+

>mRNA_M-pyrifera_M_contig92225.21348.1 ID=mRNA_M-pyrifera_M_contig92225.21348.1|Name=mRNA_M-pyrifera_M_contig92225.21348.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1512bp|location=Sequence derived from alignment at M-pyrifera_M_contig92225:12..767+ (Macrocystis pyrifera P11B4 male)
CCCGACGTGTACTACGCGCCGCTGGGCCCCACGGGTGACCGGGTGGACAC
GGAGGACCGGCCGGAGCTGCGGCGCGGGCAGGTGGAGGTGGAGGCGCCGG
CCGAGTACCTGGTGAGGCCGCCGCAGCCGCCGTCGTACGTCTTCCTCATC
GACGTGTCGTACCACGCGGTGGCCAGCGGCATGCTGCAGTGCGCGACGGA
GGCGATCAAGTCGTCGCTGGATCGGCTGCCCGGCGGCGAGCGCGCCCAGA
TCAGCTTCATCACCTACGACTCCTCCGTGCACTTTTACCGGCTGAACGGT
GACTCGGACCGGCCGCACATGCTCAGCGTGCCCGACCTGTCGCTGCTGTC
CAAAGACAGCACCTTCCTGCCGCAGCCGGACGACCTGCTGTGCAACCTGG
CCAGCGCGCGCGGGGCGGTGGACGCGCTGCTCGACTCGCTGCCGTCTGCG
TTCGAGGGCACGCGCTGCGTGGACACCGCGCTGGGCGCCGCTCTGCGCGC
CGCGTTGGGCGTGCTGCGCCGTGTAGGTGGCAAGCTGTGCCTGTTCCAGA
CGGCGCTGCCGACGCTGGGCGAGGGCGCGCTGAAGCCCCGGTCGGGCGCC
GCCGCCGGCGGCGCGCGCGGCGCGGAGGGCCAGCGCAAGCTGCTGCTGCC
GGTGGACAACTTTTACAAGCACCGTGCGGTGGAGATGTGCCGGCACCAGA
TCTGCTGCGACACGTTCCTCTTCGCGCCGCACTACACGGACGTCGCCTCG
CTGTCCCCCGACGTGTACTACGCGCCGCTGGGCCCCACGGGTGACCGGGT
GGACACGGAGGACCGGCCGGAGCTGCGGCGCGGGCAGGTGGAGGTGGAGG
CGCCGGCCGAGTACCTGGTGAGGCCGCCGCAGCCGCCGTCGTACGTCTTC
CTCATCGACGTGTCGTACCACGCGGTGGCCAGCGGCATGCTGCAGTGCGC
GACGGAGGCGATCAAGTCGTCGCTGGATCGGCTGCCCGGCGGCGAGCGCG
CCCAGATCAGCTTCATCACCTACGACTCCTCCGTGCACTTTTACCGGCTG
AACGGTGACTCGGACCGGCCGCACATGCTCAGCGTGCCCGACCTGTCGCT
GCTGTCCAAAGACAGCACCTTCCTGCCGCAGCCGGACGACCTGCTGTGCA
ACCTGGCCAGCGCGCGCGGGGCGGTGGACGCGCTGCTCGACTCGCTGCCG
TCTGCGTTCGAGGGCACGCGCTGCGTGGACACCGCGCTGGGCGCCGCTCT
GCGCGCCGCGTTGGGCGTGCTGCGCCGTGTAGGTGGCAAGCTGTGCCTGT
TCCAGACGGCGCTGCCGACGCTGGGCGAGGGCGCGCTGAAGCCCCGGTCG
GGCGCCGCCGCCGGCGGCGCGCGCGGCGCGGAGGGCCAGCGCAAGCTGCT
GCTGCCGGTGGACAACTTTTACAAGCACCGTGCGGTGGAGATGTGCCGGC
ACCAGATCTGCTGCGACACGTTCCTCTTCGCGCCGCACTACACGGACGTC
GCCTCGCTGTCC
back to top