mRNA_M-pyrifera_M_contig92175.21343.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92175.21343.1
Unique NamemRNA_M-pyrifera_M_contig92175.21343.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A3N5QVV7_9PLAN (DUF1553 domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5QVV7_9PLAN)

HSP 1 Score: 297 bits (760), Expect = 3.140e-96
Identity = 142/259 (54.83%), Postives = 189/259 (72.97%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADGSASS---PIESKAFRRSVYVQIRRSQPL 768
            ADELK+ D +I  +RS+KPVE+F+ ALTE     P T +FHRGD+RQP D + PG ++ICS  GT  ++F   +   P+SGRRLA+ARW+T   +PL ARVLVNR W+HH G G+ D+P DFG LG  PTHPELL+WLA +FV+ GW LK LH+L+M STAYRQS+ R      +D D++LYSR +V RLDAE++RD +L  +GVL  RM+GPA+P++ DDVGQ++VAAD  A     P +  AFRR +Y+Q+RR++PL
Sbjct:   38 ADELKKFDAKINEIRSKKPVEDFVPALTEVTGSIPETQVFHRGDYRQPKDAVGPGVLLICSSPGTR-IDFAPKNEQTPSSGRRLAFARWITGNDNPLTARVLVNRFWLHHMGHGLVDTPGDFGVLGDRPTHPELLDWLARDFVTHGWKLKRLHKLIMQSTAYRQSAARDPRKTEIDGDDRLYSRRSVLRLDAESVRDRMLATAGVLGTRMFGPATPVKEDDVGQVVVAADAPAPGAEVPADHPAFRRGLYIQVRRTRPL 295          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A3B8Q303_9BACT (PSD1 domain-containing protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8Q303_9BACT)

HSP 1 Score: 297 bits (761), Expect = 8.720e-96
Identity = 145/263 (55.13%), Postives = 192/263 (73.00%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAAD---GSASSPIES----KAFRRSVYVQIRRSQPL 768
            AD+LK +D +IA +R RKP E+FI  LTE  DH P T++FHRGD+ QP D + P G+ +  R+   P+E P +D +  TSGRRLA+ARWLT+G + LVARVLVNRVWMHHFG G+  +PADFG +G  P+HPELL+WLA +F+  GW LK LH+L+M STAYRQSS R  +++  D +N+LY R +V+RLDAEAIRD++L VSG LN++M+GP  P++ D  GQI+V  D   G    P+ES    + FRRS+Y+Q RRS+PL
Sbjct:   65 ADDLKAMDAKIAEIRGRKPAEDFISVLTEPADHLPVTYVFHRGDYHQPKDPVAPSGLSVLGRNAI-PMEIPSDDPTLATSGRRLAFARWLTSGTNALVARVLVNRVWMHHFGHGLVGTPADFGAMGERPSHPELLDWLARDFMDHGWKLKRLHKLIMTSTAYRQSSLRDPSSERRDPENRLYWRKSVQRLDAEAIRDTVLAVSGSLNDKMFGPPIPVRPDVHGQIVVGEDKTEGDNKMPVESSLNGEEFRRSIYIQARRSRPL 326          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A517ZTV4_9PLAN (Planctomycete cytochrome C n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZTV4_9PLAN)

HSP 1 Score: 298 bits (764), Expect = 4.460e-92
Identity = 141/255 (55.29%), Postives = 183/255 (71.76%), Query Frame = 1
Query:    4 DELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADGSASSPIESKAFRRSVYVQIRRSQPL 768
            +ELK+ D +I  +R +KPVE+F+R LTE P   P TFLFHRGDH+QP  E++P  + + + +G +P E P+ND + PT+GRRLAYARWLTNG HPL+ARV+ NRVW+HHFGRGI  +PADFG  G  PTHP+LL+WLADEF+++GWSLK LHR +M STAYRQSS+   +   +D  N  Y +  V RLDAE IRD +L  +G L+ +MYGP  P++ D VGQI+V  D +          RRSVY+Q RRSQP+
Sbjct:  489 EELKKFDDRIGEIRKKKPVEDFVRILTEVPGRVPETFLFHRGDHQQPKHEVIPAALTVAAPEG-QPFEIPKNDEALPTTGRRLAYARWLTNGRHPLLARVIANRVWLHHFGRGIVPTPADFGTAGQPPTHPKLLDWLADEFMAQGWSLKQLHRTIMLSTAYRQSSETDASKQQIDSSNFYYWKKPVVRLDAEVIRDHVLATAGTLSSKMYGPPVPVKEDFVGQIVVGGDDT----------RRSVYIQQRRSQPM 732          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A2E7ES52_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7ES52_9PLAN)

HSP 1 Score: 295 bits (754), Expect = 9.030e-91
Identity = 149/257 (57.98%), Postives = 184/257 (71.60%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTE-TPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADGSASSPIESKAFRRSVYVQIRRSQPL 768
            AD+LK  D++IA +RS+KP EEFIR LTE T D  P T LF+RGD+RQP   I PGG+ I + D   P E   ND+ RPTSGRRLAYARWLT+G HPLVARVLVNR W+HHFG+    +P +FG LG+ PTHPELL+WLADEF+++GWSLK LHRL+M ST YRQ S  TE +  VD  NQLY    +RRL+AE IRD+IL VS  L+++MYGPA  +  DD GQ+I + D            RRSVY+++RRSQP+
Sbjct:  482 ADKLKAFDKEIADIRSQKPAEEFIRVLTEPTADAPPETQLFYRGDYRQPKQAIAPGGLTIAAPDDA-PFEIAFNDSQRPTSGRRLAYARWLTSGRHPLVARVLVNRFWLHHFGQTFVSTPDEFGQLGTLPTHPELLDWLADEFMAKGWSLKHLHRLIMRSTVYRQQSLATELSQQVDGSNQLYGHFPIRRLEAETIRDAILFVSDRLDDKMYGPAIAVSQDDTGQVITSGDRQ----------RRSVYLEVRRSQPV 727          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A3D1DR14_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D1DR14_9PLAN)

HSP 1 Score: 288 bits (738), Expect = 4.190e-90
Identity = 140/263 (53.23%), Postives = 181/263 (68.82%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADGSASS-------PIESKAFRRSVYVQIRRSQPL 768
            ADE+K  D++I  +RSRKP +EF+R L E P   P T LFHRGDHRQP  E+ PGG+ + + DG   L    ND  RP++GRRLA+ARWLT+G HPLV R LVNR+WMHHFGRG+ ++P +FG +G  PTHP LL+WL+ EF   GW+LK  HRL+M ST YRQ S  ++A  A D +N  Y R  V R+DAE IRDSIL V+G L  + YGP  P++ D VGQI++  D  A+S       P++ +  RRSVY+Q+RRS+PL
Sbjct:  255 ADEIKAFDKRIQAIRSRKPKQEFLRVLMEVPGQVPVTKLFHRGDHRQPRHEVAPGGLTVTAPDGLR-LVIDPNDKKRPSTGRRLAWARWLTSGRHPLVGRALVNRIWMHHFGRGLVNTPGEFGKMGEKPTHPVLLDWLSTEFADSGWNLKRFHRLIMRSTVYRQVSTHSDALAADDPENIFYWRKPVFRMDAETIRDSILAVNGRLITKFYGPPVPVKEDAVGQIVIGIDKKAASNRPGNDIPLKGEDLRRSVYIQVRRSRPL 516          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A2E1KRK6_9PLAN (PSD1 domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E1KRK6_9PLAN)

HSP 1 Score: 287 bits (734), Expect = 3.800e-89
Identity = 145/256 (56.64%), Postives = 181/256 (70.70%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADGSASSPIESKAFRRSVYVQIRRSQPL 768
            AD++K ++ +IA V+   PVEEF+R  TET    P TFLFHRGDHRQP  E+ PGG+ I +  G E    P++D   P SGRRLAYARWLT+G HPLVARVLVNRVWMHHFGRGI D+P +FG LG+ P+HP+LL+W+A  F+  GWSLK LHRLM+ STAYRQSS R   +D VD  N+ Y    V+RLDAE +RD IL V+G ++ERMYGP   ++ D  GQ++V  DGS          RRSVY+Q RR+QP+
Sbjct:  128 ADQIKTMNTEIAKVKGTIPVEEFLRCTTETAGTIPATFLFHRGDHRQPQHEVKPGGLTITAPSG-ERFAIPDSDPQAPFSGRRLAYARWLTSGQHPLVARVLVNRVWMHHFGRGIVDTPGEFGKLGTLPSHPKLLDWMASYFMEHGWSLKQLHRLMLTSTAYRQSSIRDPRSDHVDSGNKYYWHKAVQRLDAEIVRDRILAVTGRIDERMYGPPIGVKTDTSGQVVV--DGS---------NRRSVYIQARRTQPV 371          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A257TZ66_9BACT (Cytochrome c domain-containing protein n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257TZ66_9BACT)

HSP 1 Score: 292 bits (747), Expect = 1.470e-88
Identity = 139/263 (52.85%), Postives = 194/263 (73.76%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADG-----SASSPIE--SKAFRRSVYVQIRRSQPL 768
            AD LK+  ++ A +R++ P EEF+RA+TE P     TF+FHRGD +QP +++ PG + I +  G    + P +DA+ PT+GRRLA+AR LT+G HPLVARV+VNRVW+HHFGRG+  +P DFG LG  PTHPELL+WLA EF+  GWS+K LHRL+M S AYRQSS+R E ADAVD +N+LY+RM+VRRL++EA+RD+IL + G  +++M+GP  P+  D+VGQI++  +        + P+    + +RRS+YVQ+RRS+PL
Sbjct:  638 ADNLKRYSEKAAEIRAKIPPEEFVRAVTEVPGQASPTFVFHRGDFQQPKEQVSPGDLTILA--GATTTDIPADDANVPTTGRRLAFARHLTDGRHPLVARVIVNRVWLHHFGRGLVGTPGDFGVLGERPTHPELLDWLAAEFMDHGWSVKHLHRLIMTSAAYRQSSRRNEKADAVDPENRLYARMSVRRLESEAVRDAILSIGGQRHDKMFGPPVPVMEDEVGQIVIGRENLDGERKPTGPVSLGGEEYRRSLYVQMRRSRPL 898          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A3C1HAX3_9BACT (PSD1 domain-containing protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3C1HAX3_9BACT)

HSP 1 Score: 281 bits (718), Expect = 1.770e-88
Identity = 142/273 (52.01%), Postives = 184/273 (67.40%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTE----------AADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADGSASS-------PIESKAFRRSVYVQIRRSQPL 768
            ADELK +D +IA  R+RKP E+F+  LTE P + P T+ FHRGD  QP + + PGG+ +    G   +EFPE D S PT+GRRLA+ARW+ + ++PL ARV+VNRVWM HFGRG+  +P DFG +G  PTHPELL+WLA EF   GWSLK LHRL++ STAYRQSS R            A + VD +++LY R  V RLDAEAIRDSIL VSG +N +M+GP  P++ D  GQ++V  D +          P+  +  RRSVY+Q+RRS+PL
Sbjct:  132 ADELKGLDARIAETRARKPQEDFVSLLTEDPGNAPITYRFHRGDPHQPKEPVKPGGLSVLEPSGRA-VEFPEKDPSLPTTGRRLAFARWVASTNNPLFARVIVNRVWMEHFGRGLVRTPGDFGAMGEKPTHPELLDWLATEFARGGWSLKKLHRLILTSTAYRQSSARVTNDGRHPGRMLAGERVDPEDRLYWRKPVIRLDAEAIRDSILAVSGAMNPKMFGPPVPVRTDVTGQVVVGVDKTEGDNKMPVDVPLNGEEHRRSVYIQVRRSRPL 403          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A1N6HSU7_9BACT (Planctomycete cytochrome C n=1 Tax=Singulisphaera sp. GP187 TaxID=1882752 RepID=A0A1N6HSU7_9BACT)

HSP 1 Score: 288 bits (737), Expect = 4.440e-88
Identity = 142/255 (55.69%), Postives = 184/255 (72.16%), Query Frame = 1
Query:   28 QIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADG--SASSPIESKA------FRRSVYVQIRRSQPL 768
            Q+A  R ++P E+F+ ALTE P   PTT LF RGD +QP   + PG +V+ +   +E  + P +D + PTSGRRLAYAR LTNG HPLVARVLVNRVW+HHFGRGI ++P DFG LG  P+HP LL+WLADEF+S GWSLK LHRL++ STAYRQSS+R    +A+D D++L+ RM VRRL+AEA+RD++L VSG L   MYGP  P+  D+ GQ+IV  D   +A  P+  +A      +RRS+Y+Q+RRS PL
Sbjct:  495 QVAKAREKRPAEDFVHALTEVPGQIPTTHLFFRGDIQQPRQAVQPGELVVLTA-ASETPDIPVDDPALPTSGRRLAYARHLTNGKHPLVARVLVNRVWLHHFGRGIVNTPGDFGMLGDRPSHPALLDWLADEFMSNGWSLKKLHRLILTSTAYRQSSRREPKLEAIDPDDRLFGRMPVRRLEAEAVRDAMLAVSGQLTPTMYGPPVPVAIDEAGQVIVGIDNRDAAGRPVSQRASLGAEEWRRSLYIQVRRSLPL 748          
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Match: A0A2E8D960_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D960_9PLAN)

HSP 1 Score: 287 bits (734), Expect = 1.280e-87
Identity = 144/263 (54.75%), Postives = 187/263 (71.10%), Query Frame = 1
Query:    1 ADELKQVDQQIATVRSRKPVEEFIRALTE-TPDHRPTTFLFHRGDHRQPTDEIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVARVLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLKSLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSILQVSGVLNERMYGPASPIQADDVGQIIVAADG------SASSPIESKAFRRSVYVQIRRSQPL 768
            A ELK++ ++   VR+ KP EEF+RA+ E T    P T LFHRGDH QP  E+ P  + + +    +P+EFP ND + PTSGRRLAYA+WLT+G HPL ARV+VNR+W++HFGRG+  +P DFG LG  PTHPELL+WLA+EFV+ GWS+K LHRL+M STAYRQSS R    DAVD DN LY RM +RRL+AE +RD+ L VSG LN + +G A P+ AD VG+ ++  +        A  P++ + FRRSVY+Q RRS+PL
Sbjct:  489 AAELKKMQEKADAVRATKPKEEFVRAVWEVTGKELPKTVLFHRGDHEQPKQELPPRELTVLT--SLKPVEFPVNDEALPTSGRRLAYAKWLTSGEHPLAARVIVNRIWLNHFGRGLVPTPGDFGALGVEPTHPELLDWLANEFVASGWSVKHLHRLIMTSTAYRQSSLRRPEGDAVDADNLLYWRMPIRRLEAEVLRDTALAVSGELNLKPFGTAVPVMADRVGRFVIGKENLNAGRPGAVVPMKGEDFRRSVYIQARRSRPL 749          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92175.21343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3N5QVV7_9PLAN3.140e-9654.83DUF1553 domain-containing protein (Fragment) n=1 T... [more]
A0A3B8Q303_9BACT8.720e-9655.13PSD1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A517ZTV4_9PLAN4.460e-9255.29Planctomycete cytochrome C n=3 Tax=Symmachiella Ta... [more]
A0A2E7ES52_9PLAN9.030e-9157.98Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A3D1DR14_9PLAN4.190e-9053.23Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A2E1KRK6_9PLAN3.800e-8956.64PSD1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A257TZ66_9BACT1.470e-8852.85Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A3C1HAX3_9BACT1.770e-8852.01PSD1 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A1N6HSU7_9BACT4.440e-8855.69Planctomycete cytochrome C n=1 Tax=Singulisphaera ... [more]
A0A2E8D960_9PLAN1.280e-8754.75Cytochrome c domain-containing protein n=1 Tax=Pla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92175contigM-pyrifera_M_contig92175:1..768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score286.2
Seed ortholog evalue1.5e-74
Seed eggNOG ortholog344747.PM8797T_03259
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Planctomycete cytochrome C
EggNOG OGs2IWRR@203682,COG4654@1,COG4654@2
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size768
Cds size768
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816835.0319855-CDS-M-pyrifera_M_contig92175:0..7681622816835.0319855-CDS-M-pyrifera_M_contig92175:0..768Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92175 1..768 -
1692278206.4072578-CDS-M-pyrifera_M_contig92175:0..7681692278206.4072578-CDS-M-pyrifera_M_contig92175:0..768Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92175 1..768 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92175.21343.1prot_M-pyrifera_M_contig92175.21343.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92175 1..768 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92175.21343.1

>prot_M-pyrifera_M_contig92175.21343.1 ID=prot_M-pyrifera_M_contig92175.21343.1|Name=mRNA_M-pyrifera_M_contig92175.21343.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
ADELKQVDQQIATVRSRKPVEEFIRALTETPDHRPTTFLFHRGDHRQPTD
EIVPGGMVICSRDGTEPLEFPENDASRPTSGRRLAYARWLTNGHHPLVAR
VLVNRVWMHHFGRGIADSPADFGNLGSAPTHPELLNWLADEFVSEGWSLK
SLHRLMMNSTAYRQSSQRTEAADAVDYDNQLYSRMNVRRLDAEAIRDSIL
QVSGVLNERMYGPASPIQADDVGQIIVAADGSASSPIESKAFRRSVYVQI
RRSQPL
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mRNA from alignment at M-pyrifera_M_contig92175:1..768-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92175.21343.1 ID=mRNA_M-pyrifera_M_contig92175.21343.1|Name=mRNA_M-pyrifera_M_contig92175.21343.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig92175:1..768- (Macrocystis pyrifera P11B4 male)
GCCGACGAGCTGAAGCAAGTCGACCAGCAAATCGCCACCGTGCGAAGCCG GAAACCGGTCGAAGAATTCATTCGGGCGTTGACCGAAACGCCTGATCATC GTCCCACAACGTTTCTGTTTCATCGCGGCGATCACCGCCAACCCACCGAC GAAATTGTCCCGGGTGGAATGGTCATTTGCAGTCGCGACGGAACCGAGCC GCTGGAATTCCCTGAGAACGATGCCTCTCGACCCACCAGCGGCCGCCGCT TGGCTTACGCCCGATGGCTTACCAATGGTCATCATCCACTGGTCGCTCGC GTGCTGGTGAATCGGGTCTGGATGCACCACTTCGGGCGAGGCATCGCCGA CAGTCCCGCGGACTTTGGAAATCTTGGCTCCGCACCAACGCACCCTGAAT TGTTGAACTGGCTGGCCGACGAGTTCGTCTCTGAAGGCTGGTCGCTGAAG TCGTTGCACCGGTTGATGATGAATTCGACCGCATATCGACAATCTTCGCA GCGGACCGAAGCGGCGGACGCCGTGGACTACGACAACCAACTTTACAGCC GTATGAATGTGCGGCGACTCGATGCCGAGGCAATTCGAGATTCCATCCTG CAGGTTAGCGGCGTGCTGAACGAGCGAATGTACGGCCCCGCCAGCCCCAT TCAAGCCGACGACGTAGGGCAGATCATCGTCGCGGCAGATGGTTCCGCAT CGTCGCCCATCGAAAGTAAGGCCTTTCGCCGGAGTGTGTACGTGCAGATT CGTCGCAGCCAACCGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92175:1..768-

>mRNA_M-pyrifera_M_contig92175.21343.1 ID=mRNA_M-pyrifera_M_contig92175.21343.1|Name=mRNA_M-pyrifera_M_contig92175.21343.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig92175:1..768- (Macrocystis pyrifera P11B4 male)
GCCGACGAGCTGAAGCAAGTCGACCAGCAAATCGCCACCGTGCGAAGCCG
GAAACCGGTCGAAGAATTCATTCGGGCGTTGACCGAAACGCCTGATCATC
GTCCCACAACGTTTCTGTTTCATCGCGGCGATCACCGCCAACCCACCGAC
GAAATTGTCCCGGGTGGAATGGTCATTTGCAGTCGCGACGGAACCGAGCC
GCTGGAATTCCCTGAGAACGATGCCTCTCGACCCACCAGCGGCCGCCGCT
TGGCTTACGCCCGATGGCTTACCAATGGTCATCATCCACTGGTCGCTCGC
GTGCTGGTGAATCGGGTCTGGATGCACCACTTCGGGCGAGGCATCGCCGA
CAGTCCCGCGGACTTTGGAAATCTTGGCTCCGCACCAACGCACCCTGAAT
TGTTGAACTGGCTGGCCGACGAGTTCGTCTCTGAAGGCTGGTCGCTGAAG
TCGTTGCACCGGTTGATGATGAATTCGACCGCATATCGACAATCTTCGCA
GCGGACCGAAGCGGCGGACGCCGTGGACTACGACAACCAACTTTACAGCC
GTATGAATGTGCGGCGACTCGATGCCGAGGCAATTCGAGATTCCATCCTG
CAGGTTAGCGGCGTGCTGAACGAGCGAATGTACGGCCCCGCCAGCCCCAT
TCAAGCCGACGACGTAGGGCAGATCATCGTCGCGGCAGATGGTTCCGCAT
CGTCGCCCATCGAAAGTAAGGCCTTTCGCCGGAGTGTGTACGTGCAGATT
CGTCGCAGCCAACCGCTGGCCGACGAGCTGAAGCAAGTCGACCAGCAAAT
CGCCACCGTGCGAAGCCGGAAACCGGTCGAAGAATTCATTCGGGCGTTGA
CCGAAACGCCTGATCATCGTCCCACAACGTTTCTGTTTCATCGCGGCGAT
CACCGCCAACCCACCGACGAAATTGTCCCGGGTGGAATGGTCATTTGCAG
TCGCGACGGAACCGAGCCGCTGGAATTCCCTGAGAACGATGCCTCTCGAC
CCACCAGCGGCCGCCGCTTGGCTTACGCCCGATGGCTTACCAATGGTCAT
CATCCACTGGTCGCTCGCGTGCTGGTGAATCGGGTCTGGATGCACCACTT
CGGGCGAGGCATCGCCGACAGTCCCGCGGACTTTGGAAATCTTGGCTCCG
CACCAACGCACCCTGAATTGTTGAACTGGCTGGCCGACGAGTTCGTCTCT
GAAGGCTGGTCGCTGAAGTCGTTGCACCGGTTGATGATGAATTCGACCGC
ATATCGACAATCTTCGCAGCGGACCGAAGCGGCGGACGCCGTGGACTACG
ACAACCAACTTTACAGCCGTATGAATGTGCGGCGACTCGATGCCGAGGCA
ATTCGAGATTCCATCCTGCAGGTTAGCGGCGTGCTGAACGAGCGAATGTA
CGGCCCCGCCAGCCCCATTCAAGCCGACGACGTAGGGCAGATCATCGTCG
CGGCAGATGGTTCCGCATCGTCGCCCATCGAAAGTAAGGCCTTTCGCCGG
AGTGTGTACGTGCAGATTCGTCGCAGCCAACCGCTG
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