mRNA_M-pyrifera_M_contig92173.21341.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92173.21341.1
Unique NamemRNA_M-pyrifera_M_contig92173.21341.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A6A4Z807_9STRA (SAC domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Z807_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 9.860e-24
Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 1 
Query:   13 MDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVANGT 255
            +DSP    E  FK+ WADNADA+S  Y G  A KTD TRTG+RTIAGAL DG  +++RY++N+F D  RQDA+DL V N T
Sbjct:   58 LDSPFPAFESFFKNTWADNADAVSIMYAGTGALKTDFTRTGRRTIAGALQDGINSVTRYYLNNFSDGIRQDAFDLFVGNFT 138
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A2D4BPG4_PYTIN (SAC domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPG4_PYTIN)

HSP 1 Score: 102 bits (255), Expect = 1.210e-23
Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 1 
Query:   10 VMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVAN 249
            V+DSP E  E AFK+ WADNAD +S+ Y G  A KTD TRTGKRT+ GAL DG  +++RY++N+F D  RQDA+DLLV N
Sbjct:  535 VLDSPYEAFEVAFKNAWADNADYVSRMYAGTGALKTDFTRTGKRTLVGALQDGVNSVTRYYLNNFADGIRQDAYDLLVGN 614
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A484DY93_BRELC (Uncharacterized protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY93_BRELC)

HSP 1 Score: 102 bits (253), Expect = 2.300e-23
Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 1 
Query:   10 VMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVAN 249
            V+DSP E  E  FK+ WADNAD +S+ Y G  A KTD TRTG+RT+AGAL DG  +I+RY++N+F D  RQDA+DLLV N
Sbjct: 1301 VLDSPYESFEVVFKNAWADNADYVSRMYAGTGALKTDFTRTGRRTLAGALQDGVNSITRYYLNNFSDGIRQDAFDLLVGN 1380
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: K3WWY9_GLOUD (SAC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWY9_GLOUD)

HSP 1 Score: 101 bits (252), Expect = 3.060e-23
Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 1 
Query:   10 VMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVAN 249
            V+DSP E  E  FK+ WADNAD +S+ Y G  A KTD TRTGKRTI+GA+ DG  +++RY++N+F D  RQDA+DLLV N
Sbjct:  519 VLDSPYEAFELVFKNAWADNADYVSKMYAGTGALKTDFTRTGKRTISGAIQDGINSVTRYYLNNFADGVRQDAYDLLVGN 598
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A225VIE3_9STRA (Phosphatidylinositide phosphatase SAC1 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VIE3_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.080e-23
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:    7 GVMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVANGT 255
            GV+DSP    E  FK+ WADNAD +S+ Y G  A KTD TRTG+RTIAGAL DG  +++RY++N+F D  RQD++DLLV N T
Sbjct:  564 GVLDSPYNGFEVVFKNAWADNADYVSRMYAGTGALKTDFTRTGRRTIAGALQDGVNSVTRYYLNNFSDGIRQDSFDLLVGNFT 646
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A8K1C6S8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6S8_PYTOL)

HSP 1 Score: 101 bits (251), Expect = 4.180e-23
Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 1 
Query:   10 VMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVAN 249
            V+DSP    E  FK+ WADNAD +S+ Y G  A KTD TRTGKRTIAGAL DG  +++RY++N+F D  RQD++DL+VAN
Sbjct:  526 VLDSPYSTFEVVFKNAWADNADYVSRMYAGTGALKTDFTRTGKRTIAGALQDGVNSVTRYYLNNFSDGIRQDSYDLIVAN 605
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A1V9Z1D2_9STRA (Phosphatidylinositide phosphatase SAC1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1D2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.190e-23
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 1 
Query:   13 MDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVANGT 255
            +DSP    E AFK+ WADNADA+S  Y G  A KTD TRTGKRTIAGAL DG  +++RY++N+F D  RQDA DL V N T
Sbjct:  537 LDSPFPAFEVAFKNAWADNADAVSVMYAGTGALKTDFTRTGKRTIAGALQDGINSVTRYYLNNFSDGLRQDAMDLFVGNYT 617
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BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A3R7JZA8_9STRA (SAC domain-containing protein n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JZA8_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.800e-23
Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = 1 
Query:   10 VMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVANGT 255
            V+DSP E  E  FK+ WADNAD +S+ Y G  A KTD TRTG+RT+ GAL DG  +++RY++N+F D  RQDA+DLLV N T
Sbjct:  747 VLDSPYESFELVFKNAWADNADYVSRMYAGTGALKTDFTRTGRRTLTGALQDGVNSVTRYYLNNFADGIRQDAYDLLVGNFT 828
[Close]
BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: A0A0P1AGP1_PLAHL (Phosphatidylinositide phosphatase sac1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGP1_PLAHL)

HSP 1 Score: 100 bits (249), Expect = 7.820e-23
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1 
Query:   10 VMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVANGT 255
            V+DSP +  E  FK+ WADNAD +S+ Y G  A KTD TRTG+RTIAGAL DG  +++RY++N+F D  RQD++DLLV N T
Sbjct:  558 VLDSPYKNFEVVFKNAWADNADYVSRMYAGTGALKTDFTRTGRRTIAGALQDGVNSVTRYYLNNFSDGIRQDSFDLLVGNFT 639
[Close]
BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Match: M4BJ99_HYAAE (SAC domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJ99_HYAAE)

HSP 1 Score: 100 bits (248), Expect = 1.070e-22
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 1 
Query:   10 VMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIAGALADGHAAISRYFINHFGDAKRQDAWDLLVANGT 255
            V+DSP +  E  FK+ WADNAD +S+ Y G  A KTD TRTG+RTIAGAL DG  +++RY++N++ D  RQD++DLLV N T
Sbjct:  558 VLDSPYQSFEVVFKNAWADNADYVSKMYAGTGALKTDFTRTGRRTIAGALQDGANSVTRYYLNNYSDGIRQDSFDLLVGNFT 639
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92173.21341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4Z807_9STRA9.860e-2458.02SAC domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A2D4BPG4_PYTIN1.210e-2360.00SAC domain-containing protein n=2 Tax=Pythium insi... [more]
A0A484DY93_BRELC2.300e-2360.00Uncharacterized protein n=2 Tax=Bremia lactucae Ta... [more]
K3WWY9_GLOUD3.060e-2358.75SAC domain-containing protein n=1 Tax=Globisporang... [more]
A0A225VIE3_9STRA3.080e-2357.83Phosphatidylinositide phosphatase SAC1 n=2 Tax=Phy... [more]
A0A8K1C6S8_PYTOL4.180e-2358.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9Z1D2_9STRA4.190e-2360.49Phosphatidylinositide phosphatase SAC1 n=1 Tax=Ach... [more]
A0A3R7JZA8_9STRA5.800e-2357.32SAC domain-containing protein n=6 Tax=Phytophthora... [more]
A0A0P1AGP1_PLAHL7.820e-2357.32Phosphatidylinositide phosphatase sac1 n=1 Tax=Pla... [more]
M4BJ99_HYAAE1.070e-2256.10SAC domain-containing protein n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92173contigM-pyrifera_M_contig92173:66..320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.3
Seed ortholog evalue2.3e-19
Seed eggNOG ortholog65071.PYU1_T009487
Preferred nameSACM1L
KEGG rclassRC00078
KEGG koko:K21797
KEGG ReactionR11680
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000226,GO:0000902,GO:0000904,GO:0001700,GO:0001932,GO:0001933,GO:0002009,GO:0002178,GO:0003674,GO:0003824,GO:0004438,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005797,GO:0005886,GO:0005887,GO:0005911,GO:0005938,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007391,GO:0007399,GO:0007409,GO:0007411,GO:0008037,GO:0008038,GO:0008088,GO:0008150,GO:0008152,GO:0008328,GO:0008610,GO:0008654,GO:0009058,GO:0009506,GO:0009605,GO:0009611,GO:0009628,GO:0009651,GO:0009653,GO:0009790,GO:0009792,GO:0009826,GO:0009888,GO:0009892,GO:0009932,GO:0009966,GO:0009968,GO:0009987,GO:0010015,GO:0010053,GO:0010054,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0010970,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016198,GO:0016199,GO:0016311,GO:0016331,GO:0016787,GO:0016788,GO:0016791,GO:0017059,GO:0019220,GO:0019222,GO:0019637,GO:0019867,GO:0021700,GO:0022008,GO:0022622,GO:0023051,GO:0023057,GO:0030030,GO:0030054,GO:0030154,GO:0030173,GO:0030176,GO:0030182,GO:0030258,GO:0030424,GO:0030425,GO:0030427,GO:0030705,GO:0031090,GO:0031122,GO:0031175,GO:0031211,GO:0031224,GO:0031226,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031520,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0031985,GO:0032268,GO:0032269,GO:0032281,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0032989,GO:0032990,GO:0032991,GO:0034593,GO:0034595,GO:0034596,GO:0034702,GO:0034703,GO:0035339,GO:0035618,GO:0035619,GO:0035838,GO:0036092,GO:0036477,GO:0040007,GO:0040011,GO:0042175,GO:0042221,GO:0042325,GO:0042326,GO:0042330,GO:0042578,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043235,GO:0043408,GO:0043409,GO:0043812,GO:0043813,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045017,GO:0045936,GO:0046328,GO:0046329,GO:0046474,GO:0046486,GO:0046488,GO:0046664,GO:0046839,GO:0046856,GO:0046907,GO:0048364,GO:0048468,GO:0048469,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048598,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048768,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051286,GO:0051641,GO:0051649,GO:0052744,GO:0052866,GO:0055044,GO:0060074,GO:0060255,GO:0060429,GO:0060560,GO:0061564,GO:0065007,GO:0070302,GO:0070303,GO:0071683,GO:0071695,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0080147,GO:0090404,GO:0090406,GO:0090407,GO:0090558,GO:0090627,GO:0097435,GO:0097447,GO:0097458,GO:0097485,GO:0098588,GO:0098590,GO:0098791,GO:0098796,GO:0098797,GO:0098802,GO:0098805,GO:0098827,GO:0098878,GO:0099111,GO:0099402,GO:0099568,GO:0106018,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:1901576,GO:1902494,GO:1902495,GO:1902531,GO:1902532,GO:1905392,GO:1905961,GO:1990234,GO:1990351
EggNOG free text desc.Phosphatidylinositide phosphatase SAC1. Source PGD
EggNOG OGs1MEFT@121069,COG5329@1,KOG1889@2759
COG Functional cat.I
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size255
Cds size255
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.9664469-CDS-M-pyrifera_M_contig92173:65..3201622816834.9664469-CDS-M-pyrifera_M_contig92173:65..320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92173 66..320 +
1692278206.3744993-CDS-M-pyrifera_M_contig92173:65..3201692278206.3744993-CDS-M-pyrifera_M_contig92173:65..320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92173 66..320 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92173.21341.1prot_M-pyrifera_M_contig92173.21341.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92173 66..320 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92173.21341.1

>prot_M-pyrifera_M_contig92173.21341.1 ID=prot_M-pyrifera_M_contig92173.21341.1|Name=mRNA_M-pyrifera_M_contig92173.21341.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
MLGVMDSPLEEVEGAFKHMWADNADALSQFYGGAPAQKTDVTRTGKRTIA
GALADGHAAISRYFINHFGDAKRQDAWDLLVANGT
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mRNA from alignment at M-pyrifera_M_contig92173:66..320+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92173.21341.1 ID=mRNA_M-pyrifera_M_contig92173.21341.1|Name=mRNA_M-pyrifera_M_contig92173.21341.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig92173:66..320+ (Macrocystis pyrifera P11B4 male)
ATGCTTGGGGTGATGGACAGTCCGTTGGAGGAAGTGGAAGGCGCTTTCAA
ACACATGTGGGCAGATAACGCAGATGCTCTGTCGCAATTTTACGGAGGAG
CACCTGCCCAAAAAACCGACGTCACACGTACAGGCAAGAGAACGATAGCA
GGAGCGCTGGCAGATGGACACGCAGCCATCTCACGCTACTTTATCAACCA
CTTCGGTGACGCAAAACGCCAAGATGCCTGGGATTTGCTAGTCGCAAACG
GAACG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92173:66..320+

>mRNA_M-pyrifera_M_contig92173.21341.1 ID=mRNA_M-pyrifera_M_contig92173.21341.1|Name=mRNA_M-pyrifera_M_contig92173.21341.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig92173:66..320+ (Macrocystis pyrifera P11B4 male)
ATGCTTGGGGTGATGGACAGTCCGTTGGAGGAAGTGGAAGGCGCTTTCAA
ACACATGTGGGCAGATAACGCAGATGCTCTGTCGCAATTTTACGGAGGAG
CACCTGCCCAAAAAACCGACGTCACACGTACAGGCAAGAGAACGATAGCA
GGAGCGCTGGCAGATGGACACGCAGCCATCTCACGCTACTTTATCAACCA
CTTCGGTGACGCAAAACGCCAAGATGCCTGGGATTTGCTAGTCGCAAACG
GAACGATGCTTGGGGTGATGGACAGTCCGTTGGAGGAAGTGGAAGGCGCT
TTCAAACACATGTGGGCAGATAACGCAGATGCTCTGTCGCAATTTTACGG
AGGAGCACCTGCCCAAAAAACCGACGTCACACGTACAGGCAAGAGAACGA
TAGCAGGAGCGCTGGCAGATGGACACGCAGCCATCTCACGCTACTTTATC
AACCACTTCGGTGACGCAAAACGCCAAGATGCCTGGGATTTGCTAGTCGC
AAACGGAACG
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