mRNA_M-pyrifera_M_contig9217.21340.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9217.21340.1
Unique NamemRNA_M-pyrifera_M_contig9217.21340.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 648 bits (1672), Expect = 8.850e-206
Identity = 432/615 (70.24%), Postives = 467/615 (75.93%), Query Frame = 1
Query:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXX-FFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXX-AEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------DGGV--RLAVLKPFTINLEEAGFTGSIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRLHLADSGSXXXXXXXXXXXXXXXXXXNAPDRVIGQSLRPIGRASPCSVLAVSAGKRDVEIGGXXXXXXXXXXXXXXARSSTGLVFMGSRVGDSLLVKYGVESAGTRPGARGERAVKREPK 1815
            MTSTAIYTCYRQLHPPTGVDHAVFGS+TAAGS DLVVAKAS LELYRVH    +   XXXXXXXXXXXXXXXXXXXXX   ++LELAGTFP+AGNIT+LA+IP                ILVVSFG AKMALVAYD +LGRL T+SIHNFDA AIGPGAGG+ESGYGLA+ALKDRP TIS+SDP+GRCLAAVVAGCQLVVLP RRHV  SVFVSEEA+R        XXXXXXXXXXX A GAG  +   GVAXXXXXXXXXXXXXXXXX                         DGG    LAV KPFTI+LEEAG TG IKAA FLEGFHEPALA+LYEPIQT AGRLAS RSTCRL LLS+NLTQGRAPVIWQ++NLPHDSWDL+ VPSPIGG+QVISTNAV+HVNQSEV SILAVNGYARATV+  LL CPLRGGD+DWGW SFR S    EVVDLSSYDVCIELDVVRCAFLTPTS+LLSLR GEVYALRLHL  + +                    P+RV+GQS+RP+GRASPCSVLAV+               XXXXXXXXX  +S GLVFMGSRVGDSLLV Y V SAGTRPG +G    KREPK
Sbjct:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP---------------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXAAGAG-ESAAGGVAXXXXXXXXXXXXXXXXXSVSARESDSEGEEDGGLGNGATAKGDGGAGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLT-TVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAX--------------XXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPK 584          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: UPI0009A38663 (cleavage and polyadenylation specificity factor subunit 1-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A38663)

HSP 1 Score: 150 bits (379), Expect = 2.520e-34
Identity = 128/482 (26.56%), Postives = 203/482 (42.12%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFTG-SIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y  YRQ HPPTG++ A++ S  +    +LVVA  S L++YR+ H   ++                           LE   +F + GN+ S+A + + G +            L++SF  AK+++V YDP    L TLS+H F+   +  G             +++    +   DP GRC   ++ G QLVVLP RR       +S+E                            ++G  G                                        G + + L  + I++ E      ++    FL G++EP L IL+EP QT+ GR+A  + TC +V +S+N+ Q   PVIW + NLP D    +AVP PIGGV + + N++L++NQS     +   G +  ++ +G    PLR  D                        V I LD  + AF++   +++SL+GGE+Y L L
Sbjct:    1 MYAVYRQAHPPTGIEFAIYCSFFSNTERNLVVAGTSQLQVYRLIHDAESSVKGDKSSEVKGRKEK------------LEQMASFSLFGNVMSIASVQLAGSKR---------DALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELKDGF------------VQNVHIPLVRVDPDGRCAVMLIYGTQLVVLPFRRDT-----LSDE----------------------------QDGVMGE---------------------------------------GQKSSFLPSYIIDVRELDEKLLNVIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQS-----VPPYGVSLNSLTNGTTSFPLRIQDG-----------------------VKIMLDCAQAAFVSYDKMVISLKGGEIYVLTL 349          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: A0A401T3J4_CHIPU (Uncharacterized protein n=7 Tax=Chondrichthyes TaxID=7777 RepID=A0A401T3J4_CHIPU)

HSP 1 Score: 150 bits (379), Expect = 3.650e-33
Identity = 128/482 (26.56%), Postives = 203/482 (42.12%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFTG-SIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y  YRQ HPPTG++ A++ S  +    +LVVA  S L++YR+ H   ++                           LE   +F + GN+ S+A + + G +            L++SF  AK+++V YDP    L TLS+H F+   +  G             +++    +   DP GRC   ++ G QLVVLP RR       +S+E                            ++G  G                                        G + + L  + I++ E      ++    FL G++EP L IL+EP QT+ GR+A  + TC +V +S+N+ Q   PVIW + NLP D    +AVP PIGGV + + N++L++NQS     +   G +  ++ +G    PLR  D                        V I LD  + AF++   +++SL+GGE+Y L L
Sbjct:   85 MYAVYRQAHPPTGIEFAIYCSFFSNTERNLVVAGTSQLQVYRLIHDAESSVKGDKSSEVKGRKEK------------LEQMASFSLFGNVMSIASVQLAGSKR---------DALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELKDGF------------VQNVHIPLVRVDPDGRCAVMLIYGTQLVVLPFRRDT-----LSDE----------------------------QDGVMGE---------------------------------------GQKSSFLPSYIIDVRELDEKLLNVIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQS-----VPPYGVSLNSLTNGTTSFPLRIQDG-----------------------VKIMLDCAQAAFVSYDKMVISLKGGEIYVLTL 433          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: S4RE76_PETMA (Cleavage and polyadenylation specific factor 1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RE76_PETMA)

HSP 1 Score: 147 bits (370), Expect = 5.400e-33
Identity = 126/482 (26.14%), Postives = 203/482 (42.12%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFTG-SIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y+ +R++HPPTG++HAV+    ++   +LVVA  S L++YR+ H   + +                          LE   +F + GNI S+A + + G              L+++F  AK+++V YDP    L TLS+H F+ D I  G  G            +    +   DP  RC A +V G +LVVLP RR       +++EA                                GV+                                      G + ++L  + I+L        ++    FL G++EP L IL+EP QT+ GR+A  + TC +V +S+N+ Q   P+IW + +LP D    +AVP PIGGV + + N++L++NQS     +   G +  ++  G    PLR  D                        V + LD  +  F++   +++SL+GGE+Y L L
Sbjct:    1 MYSVHRKVHPPTGLEHAVYCHFFSSQERNLVVAGGSQLQIYRLIHDTESVSKGDKPTDGKPRKDK------------LEFMSSFSLFGNIMSMASVRLSGSSR---------DALLLAFMDAKLSVVEYDPATHDLKTLSLHYFEEDEIKDGFHG------------NVHVPVVRVDPDARCAAMLVYGTRLVVLPFRRET-----LADEA------------------------------EGGVSE-------------------------------------GQKPSLLPSYVIDLRGLDEKLLNVLDMQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCGIVAISLNIAQRVHPIIWSLSSLPFDCTQALAVPKPIGGVVIFAVNSLLYMNQS-----VPPYGASLNSITHGSTAFPLRIQDG-----------------------VKMTLDCAQATFVSYDKIVISLKGGEIYVLTL 349          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: UPI0018F6BB81 (cleavage and polyadenylation specificity factor subunit 1 isoform X1 n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F6BB81)

HSP 1 Score: 149 bits (377), Expect = 6.170e-33
Identity = 128/482 (26.56%), Postives = 202/482 (41.91%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFTG-SIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y  YRQ HPPTG++ A++ S  +    +LVVA  S L++YR+ H   +                            LE   +F + GN+ S+A + + G +            L++SF  AK+++V YDP    L TLS+H F+   +  G             +++    +   DP GRC   ++ G QLVVLP RR       +S+E                            ++G  G                                        G + + L  + I++ E      ++    FL G++EP L IL+EP QT+ GR+A  + TC +V +S+N+ Q   PVIW + NLP D    +AVP PIGGV + + N++L++NQS     +   G +  ++ +G    PLR  D                        V I LD  + AF++   +++SL+GGE+Y L L
Sbjct:    1 MYAVYRQTHPPTGIEFAIYCSFFSNTERNLVVAGTSQLQVYRLIHDAESTVKGDKPSGRKEK---------------LEQMASFSLFGNVMSIASVQLAGSKR---------DALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELKDGF------------VQNIHIPLVRVDPDGRCAVMLIYGTQLVVLPFRRDT-----LSDE----------------------------QDGVMGE---------------------------------------GQKSSFLPSYIIDVRELDEKLLNVIDMQFLYGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLPFDCTQALAVPKPIGGVVIFAINSLLYLNQS-----VPPYGVSLNSLTNGTTSFPLRIQDG-----------------------VKIMLDCAQAAFVSYDKMVISLKGGEIYVLTL 346          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: T1J479_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J479_STRMM)

HSP 1 Score: 149 bits (376), Expect = 7.960e-33
Identity = 128/486 (26.34%), Postives = 200/486 (41.15%), Query Frame = 1
Query:    4 TSTAIYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFT-GSIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            TS  +Y  ++QLHPPTGV+HA++         +LV+A ++ L ++R+ H   NN                           +E   T+ + GNI SL  + + G              L++SF  A++++V YDP    L TLS+H F+ D +  G             ++         DP GRC   +  G ++VVLP R+       +SE+                              G++G +                                           VL  +TI+++E      +I    FL G++EP L  LYEP++T+ GR+A  + TC +  +S+N+ Q   PVIW + NLP D   ++ VP PIGGV V+S NAVL++NQS     +   G +  ++ +     PL+  DN                       V + LD  +  F+    L+LSL+GGE+Y L L
Sbjct:    3 TSAVMYAVHKQLHPPTGVEHAIYCHFFNRREKNLVMAGSNQLRVFRLTHETDNNGRIKETNDSKSAKMK------------MECLQTYSLFGNIMSLRSVQLAGSSR---------DALLLSFRDARLSVVEYDPGTDDLKTLSLHYFEEDEMKDGR------------MQICQIPEIRVDPEGRCAVMMAYGNKIVVLPFRKET-----ISEDG-------------------------DTLYGSSGKSP------------------------------------------VLASYTIHIKELEEKMDNIIDLQFLHGYYEPTLLFLYEPLKTWTGRIAVRQDTCAIAAISLNIQQRVHPVIWSVGNLPFDCIRVLVVPRPIGGVMVLSINAVLYLNQS-----IPPYGVSLNSIAEHSTAFPLKIQDN-----------------------VKLSLDCSQATFIANDKLVLSLKGGELYVLTL 355          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: A0A7L1N947_RHICY (CPSF1 factor (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1N947_RHICY)

HSP 1 Score: 148 bits (373), Expect = 1.330e-32
Identity = 128/482 (26.56%), Postives = 200/482 (41.49%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFTG-SIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y  Y+Q HPPTG++ A+F    +    +LVVA  S L++YR++H    +A                          LEL   F   GN+ S+A + + G +            L++SF  AK+++V YDP    L TLS+H F+   +  G                 P  +   DP GRC   ++ G +LVVLP RR       +S+E                               + G+                                       G + + L  + I++ E      +I    FL+G++EP L IL+EP QT+ GR+A  + TC +V +S+N+TQ   PVIW + NLP D    +AVP PIGGV + + N++L++NQS     +   G A  ++ +G    PLR  +                        V + LD  +  F++   +++SL+GGE+Y L L
Sbjct:    1 MYAVYKQAHPPTGLEFAIFCHFFSTSERNLVVAGTSQLQVYRLNHDCETSAKGDRNGEGKGHKEK------------LELVAAFSFFGNVMSMASVQLAGAKR---------DALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGF-----------VQNVHPPRVRV-DPDGRCAVMLIYGTRLVVLPFRRD-----SLSDE-------------------------------HDGLLPE------------------------------------GQKSSFLPSYIIDVRELDEKLLNIIDLQFLQGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLSNLPFDCTQALAVPKPIGGVVIFAVNSLLYLNQS-----VPPYGVALNSLTNGTTVFPLRVQEG-----------------------VRMTLDCAQATFISYDKMVISLKGGEIYVLTL 349          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: A0A7M7NFS8_STRPU (MMS1_N domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NFS8_STRPU)

HSP 1 Score: 141 bits (355), Expect = 2.740e-32
Identity = 126/482 (26.14%), Postives = 192/482 (39.83%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFT-GSIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y  YR++HPPTGV+H V+    +    +LVVAK S L +Y +  V  N  T                         LE A TF I G + S+    V G              L++SF  AK+++V YDP +  L TLS+H F+ D    G              ++    +   DP  RC   +  G +LVVLP RR       V +  +  +   RR                                                                    A++  + I L E      ++    FL G++EP L ILYEP++T+AGR+A  + TC +V LS+N+ Q   P+IW   +LP+D   + AVP PIGGV +++ N++L++NQS     +   G +  ++ D     PL+                       +   V + +D  +  F++   L LSL+ GE+Y L L
Sbjct:    1 MYAFYREIHPPTGVEHCVYCHFFSPDQQNLVVAKGSELTVYSMITVDSNKPTDKDSKPKNK----------------LEEAATFHIFGKVMSMQSAQVTGSGR---------DALLLSFMNAKVSIVEYDPNMHDLKTLSMHYFEEDETKEGV------------YRNIFHPVVKVDPDHRCAIMLTYGSKLVVLPFRR----DGLVEDLDKSMSASTRRG-------------------------------------------------------------------ALMPSYVIRLNEMDDPICNVLDIQFLHGYYEPTLLILYEPLRTWAGRVAVRQDTCSIVALSLNMAQKVHPIIWSQSSLPYDCMQVQAVPKPIGGVLILAVNSLLYLNQS-----IPPYGVSLNSLTDWSTAFPLK-----------------------TQEGVKLSMDCTQATFISYDRLALSLKDGEIYVLTL 346          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: UPI0014035BA0 (cleavage and polyadenylation specificity factor subunit 1 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014035BA0)

HSP 1 Score: 147 bits (370), Expect = 4.200e-32
Identity = 126/482 (26.14%), Postives = 203/482 (42.12%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFTG-SIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y+ +R++HPPTG++HAV+    ++   +LVVA  S L++YR+ H   + +                          LE   +F + GNI S+A + + G              L+++F  AK+++V YDP    L TLS+H F+ D I  G  G            +    +   DP  RC A +V G +LVVLP RR       +++EA                                GV+                                      G + ++L  + I+L        ++    FL G++EP L IL+EP QT+ GR+A  + TC +V +S+N+ Q   P+IW + +LP D    +AVP PIGGV + + N++L++NQS     +   G +  ++  G    PLR  D                        V + LD  +  F++   +++SL+GGE+Y L L
Sbjct:    1 MYSVHRKVHPPTGLEHAVYCHFFSSQERNLVVAGGSQLQIYRLIHDTESVSKGDKPTDGKPRKDK------------LEFMSSFSLFGNIMSMASVRLSGSSR---------DALLLAFMDAKLSVVEYDPATHDLKTLSLHYFEEDEIKDGFHG------------NVHVPVVRVDPDARCAAMLVYGTRLVVLPFRRET-----LADEA------------------------------EGGVSE-------------------------------------GQKPSLLPSYVIDLRGLDEKLLNVLDMQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCGIVAISLNIAQRVHPIIWSLSSLPFDCTQALAVPKPIGGVVIFAVNSLLYMNQS-----VPPYGASLNSITHGSTAFPLRIQDG-----------------------VKMTLDCAQATFVSYDKIVISLKGGEIYVLTL 349          
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Match: Q5EB13_DANRE (LOC564406 protein (Fragment) n=2 Tax=Danio rerio TaxID=7955 RepID=Q5EB13_DANRE)

HSP 1 Score: 140 bits (353), Expect = 4.640e-32
Identity = 126/482 (26.14%), Postives = 200/482 (41.49%), Query Frame = 1
Query:   16 IYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHHVGRNNATXXXXXXXXXXXXXXXXXXXXXXXFFLELAGTFPIAGNITSLAIIPVVGDQXXXXXXXXXXHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFDADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVLPTRRHVSPSVFVSEEARRRAQQLRRRXXXXXXXXXXXAEGAGFRNGNAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGGVRLAVLKPFTINLEEAGFTG-SIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLVLLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQSEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDLSSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRL 1458
            +Y  YRQ HPPT V+ AV+ +  ++   +LVVA  S L +YR+ +   + +                          LE   +F + GN+ S+A + +VG              L++SF  AK+++V YDP    L TLS+H F+   +  G             +++    +   DP  RC   +V G  LVVLP R+       +++E                            + G  G                                        G + + L  + I++ E      +I    FL G++EP L IL+EP QT+ GR+A  + TC +V +S+N+ Q   PVIW + NLP D   ++AVP PIGGV V + N++L++NQS     +   G +  ++ +G    PLR                          +V I LD  + +F+T   +++SL+GGE+Y L L
Sbjct:    1 MYAVYRQAHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGKSRKEK------------LEQVASFSLFGNVMSMASVQLVGTNR---------DALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGF------------VQNVHIPMVRVDPENRCAVMLVYGTCLVVLPFRKDT-----LADE----------------------------QEGIVGE---------------------------------------GQKSSFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNIMQKVHPVIWSLSNLPFDCNQVMAVPKPIGGVVVFAVNSLLYLNQS-----VPPFGVSLNSLTNGTTAFPLR-----------------------PQEEVKITLDCSQASFITSDKMVISLKGGEIYVLTL 349          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9217.21340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W8_ECTSI8.850e-20670.24Cleavage and polyadenylation specificity factor CG... [more]
UPI0009A386632.520e-3426.56cleavage and polyadenylation specificity factor su... [more]
A0A401T3J4_CHIPU3.650e-3326.56Uncharacterized protein n=7 Tax=Chondrichthyes Tax... [more]
S4RE76_PETMA5.400e-3326.14Cleavage and polyadenylation specific factor 1 n=2... [more]
UPI0018F6BB816.170e-3326.56cleavage and polyadenylation specificity factor su... [more]
T1J479_STRMM7.960e-3326.34Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
A0A7L1N947_RHICY1.330e-3226.56CPSF1 factor (Fragment) n=1 Tax=Rhinopomastus cyan... [more]
A0A7M7NFS8_STRPU2.740e-3226.14MMS1_N domain-containing protein n=1 Tax=Strongylo... [more]
UPI0014035BA04.200e-3226.14cleavage and polyadenylation specificity factor su... [more]
Q5EB13_DANRE4.640e-3226.14LOC564406 protein (Fragment) n=2 Tax=Danio rerio T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9217contigM-pyrifera_M_contig9217:2269..9602 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score649.4
Seed ortholog evalue2.5e-183
Seed eggNOG ortholog2880.D7G8W8
KEGG koko:K14401
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
EggNOG free text desc.mRNA cleavage
EggNOG OGsCOG5161@1,KOG1896@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021
Exons9
Model size2862
Cds size2862
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.8435333-CDS-M-pyrifera_M_contig9217:2268..24221622816834.8435333-CDS-M-pyrifera_M_contig9217:2268..2422Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 2269..2422 +
1692278206.2709284-CDS-M-pyrifera_M_contig9217:2268..24221692278206.2709284-CDS-M-pyrifera_M_contig9217:2268..2422Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 2269..2422 +
1622816834.8539088-CDS-M-pyrifera_M_contig9217:2470..26341622816834.8539088-CDS-M-pyrifera_M_contig9217:2470..2634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 2471..2634 +
1692278206.2826705-CDS-M-pyrifera_M_contig9217:2470..26341692278206.2826705-CDS-M-pyrifera_M_contig9217:2470..2634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 2471..2634 +
1622816834.8641956-CDS-M-pyrifera_M_contig9217:2739..31491622816834.8641956-CDS-M-pyrifera_M_contig9217:2739..3149Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 2740..3149 +
1692278206.2927752-CDS-M-pyrifera_M_contig9217:2739..31491692278206.2927752-CDS-M-pyrifera_M_contig9217:2739..3149Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 2740..3149 +
1622816834.874666-CDS-M-pyrifera_M_contig9217:3233..34341622816834.874666-CDS-M-pyrifera_M_contig9217:3233..3434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 3234..3434 +
1692278206.3039567-CDS-M-pyrifera_M_contig9217:3233..34341692278206.3039567-CDS-M-pyrifera_M_contig9217:3233..3434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 3234..3434 +
1622816834.8846996-CDS-M-pyrifera_M_contig9217:4031..41761622816834.8846996-CDS-M-pyrifera_M_contig9217:4031..4176Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 4032..4176 +
1692278206.3179483-CDS-M-pyrifera_M_contig9217:4031..41761692278206.3179483-CDS-M-pyrifera_M_contig9217:4031..4176Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 4032..4176 +
1622816834.8946357-CDS-M-pyrifera_M_contig9217:4973..50631622816834.8946357-CDS-M-pyrifera_M_contig9217:4973..5063Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 4974..5063 +
1692278206.335663-CDS-M-pyrifera_M_contig9217:4973..50631692278206.335663-CDS-M-pyrifera_M_contig9217:4973..5063Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 4974..5063 +
1622816834.9047067-CDS-M-pyrifera_M_contig9217:6823..69751622816834.9047067-CDS-M-pyrifera_M_contig9217:6823..6975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 6824..6975 +
1692278206.3454494-CDS-M-pyrifera_M_contig9217:6823..69751692278206.3454494-CDS-M-pyrifera_M_contig9217:6823..6975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 6824..6975 +
1622816834.9154806-CDS-M-pyrifera_M_contig9217:7768..86781622816834.9154806-CDS-M-pyrifera_M_contig9217:7768..8678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 7769..8678 +
1692278206.3546581-CDS-M-pyrifera_M_contig9217:7768..86781692278206.3546581-CDS-M-pyrifera_M_contig9217:7768..8678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 7769..8678 +
1622816834.9318726-CDS-M-pyrifera_M_contig9217:8966..96021622816834.9318726-CDS-M-pyrifera_M_contig9217:8966..9602Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 8967..9602 +
1692278206.3639383-CDS-M-pyrifera_M_contig9217:8966..96021692278206.3639383-CDS-M-pyrifera_M_contig9217:8966..9602Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9217 8967..9602 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9217.21340.1prot_M-pyrifera_M_contig9217.21340.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9217 2269..9602 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9217.21340.1

>prot_M-pyrifera_M_contig9217.21340.1 ID=prot_M-pyrifera_M_contig9217.21340.1|Name=mRNA_M-pyrifera_M_contig9217.21340.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=954bp
MTSTAIYTCYRQLHPPTGVDHAVFGSITAAGSHDLVVAKASILELYRVHH
VGRNNATTAAAASRGGTGLSNNDDDDDESSFFLELAGTFPIAGNITSLAI
IPVVGDQQQRRRRQQEQHILVVSFGPAKMALVAYDPLLGRLGTLSIHNFD
ADAIGPGAGGIESGYGLASALKDRPATISASDPSGRCLAAVVAGCQLVVL
PTRRHVSPSVFVSEEARRRAQQLRRRRRRMRELRRRGAEGAGFRNGNAGV
AGGGRGGGRSGEGGREGVSDAAGGGGGDGSPANGGSTDGGVRLAVLKPFT
INLEEAGFTGSIKAATFLEGFHEPALAILYEPIQTYAGRLASMRSTCRLV
LLSVNLTQGRAPVIWQIDNLPHDSWDLIAVPSPIGGVQVISTNAVLHVNQ
SEVLSILAVNGYARATVEDGLLGCPLRGGDNDWGWASFRHSKSALEVVDL
SSYDVCIELDVVRCAFLTPTSLLLSLRGGEVYALRLHLADSGSGGGGGGG
SGGGGGGGGGGNAPDRVIGQSLRPIGRASPCSVLAVSAGKRDVEIGGGGA
GSGGGGGSGGGARSSTGLVFMGSRVGDSLLVKYGVESAGTRPGARGERAV
KREPKKEEEEEEEADVVTALRSGGWAGEEEEEKGAGPVGLLNPRSGAEVK
SEESRKEAEGGAAAGGVAGRDAPAAASAAEASRVSEAGEEETGGKQAAGD
VAQGQVAVKMETGSDGAEVAGVGGGIGAPGRDIGGDGADAAAGWGEGKEG
EMKDEEDEEDEDEEEDEDEEDEKGGEGGKGVSTRGTAAAAAAAASDDDDP
PKKRIRVSNAARVKKVAPDATGDEEGQAVAAGWTEPEKRAQESLAARRAT
SVADGGTTDSAAAAPAAATAAAATLAAGVATMKADRESVAAANAAPLEAL
SRREREMVEEEEQLYGARLGSSTVGKVVVGRDLVHLGPRGEERTIEAVGF
RLKV
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mRNA from alignment at M-pyrifera_M_contig9217:2269..9602+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9217.21340.1 ID=mRNA_M-pyrifera_M_contig9217.21340.1|Name=mRNA_M-pyrifera_M_contig9217.21340.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7334bp|location=Sequence derived from alignment at M-pyrifera_M_contig9217:2269..9602+ (Macrocystis pyrifera P11B4 male)
ATGACCTCAACCGCAATCTACACTTGCTACAGGCAGCTTCACCCACCCAC GGGCGTAGACCACGCGGTCTTCGGCAGCATCACCGCCGCCGGATCGCACG ACCTCGTCGTCGCGAAGGCGTCCATTCTTGAGCTCTACCGCGTGCACCAC GTCGGTGCCGACAACGGCCCAGCGGGAGCAGCGGCAGCGGCAGGAGGAGG AGGAAGAAACAACGCAACTACTGCTGCTGCTGCTTCCAGAGGCGGGACCG GCCTCAGTAACAACGACGACGACGACGATGAGAGCTCCTTCTTCCTCGAG TTGGCGGGCACCTTCCCTATCGCCGGAAACATCACCTCCCTCGCCATAAT CCCCGTCGTGGGGGACGTCACCCCCACCGCCAACGAAAATGCCTCCACCG ACACCTCCGCCTCCGACGCAGACGACGACGCAGACGCAGCCGGGGCGGCT CGGCGGCGGCGGCAACACCAGCAGCAGCAGCGGCGCCGGCGGCAGCAGGA GCAACACATCCTCGTGGTCTCGTTCGGCCCGGCCAAGATGGCCCTGGTCG CTTACGACCCCCTCCTCGGCCGGCTGGGTACCCTCTCCATCCACAACTTC GACGCGGACGCCATCGGCCCCGGCGCCGGTGGCATCGAGTCCGGGTACGG CCTGGCCTCCGCCCTTAAGGACCGCCCGGCGACGATCTCCGCCAGCGACC CGTCGGGCCGCTGCCTCGCCGCCGTCGTCGCCGGCTGCCAGCTGGTCGTG CTGCCCACCCGGAGGCACGTGTCCCCGTCGGTGTTTGTCAGCGAGGAGGC ACGACGGCGCGCGCAACAGCTCCGGCGGCGACGGCGGCGGATGAGGGAAC TCCGGAGAAGAGGAGCGGAGGGAGCAGGGTTGTCGCCCTCGTCAAGCGAG GAGACCGCCGGGGATGATGTCGGGTTTCCGGCGGCGGAGGCCGCGAGCGC TAACGGTAGCGTGAGCCGTAACGGTAACGCCGGTGTTGCCGGTGGAGGTC GAGGGGGTGGCAGGAGTGGCGAGGGAGGGAGGGAGGGGGTCTCGGACGCC GCAGGCGGGGGAGGTGGGGACGGGTCGCCCGCGAACGGTGGGTCAACGGA TGGGGGGGTGCGTCTGGCGGTTTTGAAACCGTTCACGATAAATCTCGAGG AAGCCGGCTTCACTGGGTGAGATTTCCCGGAAATGCCCCGCCCCTGCCCG AGCCCCGTTTTTGTCTACCTCTAGTGTAACCCGACGACATTATTATAGGT AGCGCAGAGGTGACTGGGGTCGTTATTTTTGGCGAGGAGCATTGAACGCG TTTTTTTGTTTGTTGTGAAAGAAAAGGTTAAGGTTGGGAAGGGGCGTAAC AAACGGTTCGGTTTTTTGCTATTAATAGAATAGCGCCGAATGCCCCATGA CTATGGCGAGTCAGATGTCTTCGGTGTACTGCAGACCTTGGAAGTGTGTG TGCATCGCTGGTGTTGTTAGAGGTGCAGGATTCGCGTGTCGTACATGTCG TTCAGGCTGGGCATACACGAACGGGGCACCAAAAACTCCGACCCTTGTTT TTGCGGCGACTGCATGAAAAGCCCACATGAAAGCGGCGCAGCCAGCAGCC ACACGAGATACACATTTTCACCTTGGCATCGATTAGAGAATGGGCAGGGA AGGGGGGGGGGGGGGGAAGGGGGGGAGAGAGAGAGAACGAGAGGCTCAAC GCAACACGCAGAAGGATGCTCCACTTCGTCCGCAAACGTGTGTAACCTTG TAATCTGTTTCAGGTCTATAAAAGCTGCAACGTTTCTAGAGGGTTTCCAC GAGCCCGCGCTAGCGATACTGTACGAGCCGATTCAGACCTACGCGGGTCG GCTGGCGTCGATGCGGTCCACGTGTCGGCTGGTGCTGCTGTCCGTCAACT TGACCCAGGTGAAATGAAGCCCTCGTGGGGAGGGGACAGCACCTCTCGTT TTTTTTTTTTGGCAGAGGAGATATGCTGCTGTTGCTGCTTGCTGCTGTAG GGCAACGTACACAGATATACGAACTCGCAGGCAGGTTACGAGGAACTGTA GATCACGCGCGACCGATATGTTGACTCAGCGTTCCACCAGTTCGGGTATC GACCACTCCGTTCGACACTCACTCATGTATACGTACGGTAGCTGGCTGGC GTGTTTTTTTCGTGATTTATTTGTTCGAGCTTGTAGACGAGATTCGAGCG TCTGTCACAGCCGTTTCGAGCTCGCAGCTGGCTTTATATATATATGTGTG TGTGTTTTTTTCTTCATTCTTTGTACTTGACATCAGTTCGGATTCACTAA TCATTGAAAAATAATAAGCAAGCAAAGAGTGACCTCTAGTGGCAGAAAGT CCACGTGTGATCGCGGTACGGACCAGCGCTTTTGACGTATCTCGTCGCGA AGTCGGCAATAGCGTCAGGGCTGTTTCGCATTCGTCGAGTCGTCTAGCGG CCTCGTGTCGCCGCTACTGTCTGTCTGCCTGCCTGCTACGCCTATTCCCT CGAAGCTAAACTAGTAGTCACGTCGGACCTACGCCAAAAAAAACGCGTCG AAGCTAAGCCAACAGACCCGTCAAGACTACGCGAACAGACAGCGTCGGAG CTGAAGCTAACAGACCAAACAGATTCGAGCTGAAAGTCGCTCGGGGGGGG GGGGGTGGAGGAGTCAAATTAAAATTTCCCCTCTCGGTTGTGCGCGTTGA TGCAGGGTCGGGCGCCGGTCATCTGGCAGATCGACAACCTGCCCCACGAT AGCTGGGACCTGATCGCAGTACCCTCGCCAATAGGGGGGGTACAGGTGAG GCCGGCTACACTCGCTCGCCCGTTTCCACGGCCAGATTATTTTGTTTTTT TTCCATGCTTCCCGTCCCATCTGTTGTCTTCACCTCACTTCTCCAGGTAT CTCCTCCTCGTAGCTATGATCCGGGGTGTCACATATATAGCAGGCACTTC TCTCCTACTACGGTGCGCCCCTTGATTTTTTGTCGCGAGACGATGTTCAT CGTTTTCTTCCCTCGTCGACTCGAGCCGAACCGTGCATGGCTGCCGCTGC AATGGTTGATTCGGGAACAGGGGTTTCTTTCACCGGCCTGCCCTAACACT CTCCAGCCCCCCCCCTTCCCCCCCCGGTTTCGTTCGTCATCGTTTATCAC CCTGGGTGGTAGCCGTTTCCCGTGGTCATTCTTCTCGGCGCATTTTCCCT TTGGCCAGCTTTGGTGTGGACCCCCCTCTATTCGCTTTTCGTAGGCTGAA AAAGTGTCACTCGAATCCGTGAACGCTTGGTTGAAGGCGCGCTCTGGTAG GCGGTTTTTGGCAGCCAAACGGCGTCATACGGTATACTTCTACGGGAGGG GGCATAGTAATACATACTAATACGCAGCAATACATGGTAATCAGAGCCCA CGATGGATCCGAAAAAATGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCACCCTCTTCTCCTCCTCCCTCTCCCCCTCCCTCCCCCCCCGCC TCGGCGGCGGGGTGTGAGAGTGGTGCGCCTGCGCGNNNNNNNNNNAAACG CCCCCCAGCGATACGCCCCCACGCGGGGGGGCATACTACTCCAATCTTAT CCCCCGCAAAACAGGGTCACCCCCCCCCCCCTCCGCCCAAAAAAAACGCC CCCCCCCCCCCCCCCTACGCTGATGAGCCATATTTGTTTGTGTTTTACTG TGTTCCCCCGTGATGCGCACTACGTGCTGGTAGTGTATAGTGTAGAGGGC GCCGCCCGTGGGCAACAGAGGAAGTTTGCTCGTAAGAAATGCGGACGCTC GTTTATTTTTCTCACGATAAAAAAATATAAATATATATATATATATAAAT GTGTGAGTGCATAGCCGAAGAAACGGTGCTCAGGGTGGGGTGCCATGACA AACCCCGTACAATAGCCAATGGCAGCCTGTCCTGAATGGTGGCATCAGAG TCAGAAATCGGGCCTCGACTCCAAATTGACGTTTCGTTGCTATTTCTAGC GAGCATCTTGTGTACCGGAGCACACGTTGCTGCAGTAGGTACCACGGCGG TGTTATGTCTCCTTTTGAGGCAAACGCGATTGAAACGTCGGTGTATTTTT TGGGGGGGGGTTTGTAGACTTGATCAGGCTGAAGCACGGCGGTGAGTGGT GCGGGATGTGATGCTACACCCCGCACGGTGTCGCAACGCCCGGTGTGCCC TTGCCCTGCGCGTAAACCGTCTCCTGGTTCCGCGCAAACGTTTGGGGACA AAAGGAGAAGATGGCTGGCTTTTGTCGGCGGTCTCGGCTCCGCTCGCAAG CGCGCCGTCCCGACCCAGGTACGAGCTTGCTTTTCCCATCCCACCTCAGT CGATCCCCCCCCCTCCCTCCCTCACTCCCTCCCTCCCTCCCTCCCTCCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCC CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCGTGCCC CTTCCCTCCTTGGCACGCGTTCCTCCCCTCCTTCCCCCACCCCTCCCCGC CCAAGGTGATTTCGACGAACGCGGTGTTGCACGTGAACCAGTCGGAGGTG CTGTCTATCCTTGCCGTCAACGGATACGCAAGGGCCACCGTGGAAGACGG GCTGCTGGGTTGTCCTCTGCGCGGTGGGGACAACGACTGGGGGTGGGCAT CGTTCAGGTAAGGTGGGGTAGGGTGGGTGGGTAGAGTGGGTGGGTGGGTG GGTGGGTGGAGTGGATGGGTGGGTGCGTTTAGGGGACAGGGTGGGTGGAG ACGAATGGATGGGCGGGTGGCGTGAGTGAATGGGTGAGTGGGCGGGGGCG GCGGTCGGGGTGCTCTGTTCCACTGAGCGTGTGTGATGTGGCGCGGGGTG GGTCAAGCAAGACGTTTCTCCCCTGGTACAGTTTGCTACGAATTCTCACC CGCACTCTCGCTAGCCTAAGCGCTAGAACAAGGGGAGCGGAGCTACGAGA ATGTACATACGGCAGTAGTAAAAGCGAGAAGAAGCCCATATGTGTGTGTG TGTTTTCACAAATGCGCTGCCGATTCCAGTCGACCCTTGCCCCTCGTCTT CCTTTGCCGCGTTGAACCGTTGGTTGAAGTCGAAGCCTTTCCTCCTCCCG ACGAACACACGCTTCAGCGGTTCATGTGCGTGTCGGGTAGCATCTTCGCC TCTCCCCTATTCCGCTCCCGCGTACCAACTTCCGCCCCGCCCTTGGAGGT AGAGTAGGTGTGCTTTCACCAACTAGCACCGCTTCCATCCCACCCTTGAA CGGGAGGGGTTACTTCAACCAGCGGTGGTCTGCTCACGAACGCCCCAACG CCTTCTACCTCACCCCGCTCCGCCCAAACCCAACCCAACCCAACCCGACC CAACCCACCCAAGCCCCAACCCTACCCTACCCTACCCCACTTGGTTATGT TTTTCCCTCGGTGGCGGCGGCGGTGGTGTTGATCGCTGTTGTCATACCAG GCACTCGAAGTCAGCTCTCGAGGTTGTGGACCTCAGCTCGTACGACGTGT GCATCGAGCTGGACGTGGTGCGCTGTGCCTTTCTCACCCCCACGTCTCTG CTTCTCTCGCTTCGCGGCGGGGAGGTCTACGCGCTCCGCTTGCATCTCGC CGACAGCGGAAGCGGCGGGGGCGGCGGGGGCGGTAGTGGTGGTGGTGGTG GTGGTGGTGGTGGTGGCAACGCGCCTGATCGAGTGATCGGACAGTCATTA CGCCCCATCGGCCGAGCTTCTCCCTGTTCCGTGCTTGCCGTGTCGGCGGG GAAGAGGGACGTAGAGATCGGTGGAGGCGGGGCCGGAAGCGGGGGCGGGG GCGGGAGTGGGGGCGGTGCTCGGTCATCAACGGGGTTGGTGTTCATGGGG TCTAGGGTCGGCGACTCGCTTCTCGTAAAGTACGGCGTCGAGAGCGCGGG CACGCGACCGGGAGCGCGCGGGGAGAGGGCGGTGAAGCGCGAGCCTAAGA AAGAGGAGGAGGAGGAGGAGGAGGCAGATGTGGTGACGGCATTGAGAAGC GGGGGGTGGGCGGGGGAGGAGGAGGAGGAAAAGGGGGCGGGGCCGGTAGG GCTTCTAAACCCGAGATCCGGCGCAGAGGTAAAATCTGAGGAATCGCGGA AGGAGGCTGAGGGTGGCGCCGCCGCAGGCGGTGTAGCCGGCAGAGACGCC CCCGCGGCGGCCTCGGCGGCGGAGGCCTCACGCGTGTCCGAGGCGGGCGA AGAAGAGACTGGTGGAAAGCAGGCGGCGGGGGACGTGGCCCAGGGTCAGG TGGCGGTCAAGATGGAGACCGGGTCTGACGGAGCCGAAGTGGCGGGCGTA GGTGGCGGTATTGGTGCCCCAGGAAGAGATATTGGCGGCGACGGTGCTGA CGCCGCAGCGGTAGTGGCGGACGTCGCGACGGTAGCGCCCGCGGATTCGC TTTCCGCGGGTCGAACGGAGGAGGGTGGGAGTGGGGATAAGGAGCCACAA CGGCCGGACAGGGAGGCTATGGACGTCGACGACAGCCATCCGGACGGCAT CGGCTCGAAGCGAAGCCGCGACCAGCTCTCGCCCGAGCCTGCGGTGGTGG TGGTGGGAGCGGGGGCGGACGAGGCCGGAGGGAAAGGGGGCGAACGGAGA AGGGGTGACGGCAGAGAGGGCGAACGGAAAGGGGGTGAAGAAGAAAAGGG CTGGGGGGAAGGGAAAGAAGGTGAAATGAAAGACGAGGAGGACGAGGAGG ACGAGGACGAGGAGGAGGACGAGGACGAGGAGGACGAGAAGGGGGGGGAG GGGGGGAAGGGGGTCAGCACCCGAGGCACCGCGGCAGCAGCCGCAGCCGC AGCGAGTGACGACGATGACCCCCCTAAGAAAAGGATTCGCGTCTCGAACG CGGCGAGGGTTAAAAAGGTGGCGCCCGACGCCACCGGTGATGAGGAGGGT CAGGCGGTAGCGGCGGGATGGACCGAACCCGAAAAACGAGCGCAAGAAAG CTTGGCGGCGCGGCGGGCTACTAGTGTGGCGGACGGTGGTACGACCGATT CCGCCGCCGCCGCTCCTGCTGCTGCTACTGCCGCTGCTGCTACGTTGGCG GCGGGGGTGGCGACGATGAAAGCTGACCGAGAATCGGTAGCAGCGGCTAA CGCGGCCCCTCTTGAGGCGCTCAGCCGAAGAGAGCGCGAAATGGTCGAAG AGGAAGAGCAGCTGTATGGCGCGAGGCTCGGTTCCTCGACCGTGGGGAAG GTCGTCGTTGGGCGGGACCTGGTGCACCTGGGGCCTCGGGGGGAGGAGCG CACGATCGAGGCGGTTGGGTTTCGGCTAAAGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9217:2269..9602+

>mRNA_M-pyrifera_M_contig9217.21340.1 ID=mRNA_M-pyrifera_M_contig9217.21340.1|Name=mRNA_M-pyrifera_M_contig9217.21340.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5724bp|location=Sequence derived from alignment at M-pyrifera_M_contig9217:2269..9602+ (Macrocystis pyrifera P11B4 male)
ATGACCTCAACCGCAATCTACACTTGCTACAGGCAGCTTCACCCACCCAC
GGGCGTAGACCACGCGGTCTTCGGCAGCATCACCGCCGCCGGATCGCACG
ACCTCGTCGTCGCGAAGGCGTCCATTCTTGAGCTCTACCGCGTGCACCAC
GTCGATGACCTCAACCGCAATCTACACTTGCTACAGGCAGCTTCACCCAC
CCACGGGCGTAGACCACGCGGTCTTCGGCAGCATCACCGCCGCCGGATCG
CACGACCTCGTCGTCGCGAAGGCGTCCATTCTTGAGCTCTACCGCGTGCA
CCACGTCGGAAGAAACAACGCAACTACTGCTGCTGCTGCTTCCAGAGGCG
GGACCGGCCTCAGTAACAACGACGACGACGACGATGAGAGCTCCTTCTTC
CTCGAGTTGGCGGGCACCTTCCCTATCGCCGGAAACATCACCTCCCTCGC
CATAATCCCCGTCGTGGGGGACGAAGAAACAACGCAACTACTGCTGCTGC
TGCTTCCAGAGGCGGGACCGGCCTCAGTAACAACGACGACGACGACGATG
AGAGCTCCTTCTTCCTCGAGTTGGCGGGCACCTTCCCTATCGCCGGAAAC
ATCACCTCCCTCGCCATAATCCCCGTCGTGGGGGACCAGCAGCAGCGGCG
CCGGCGGCAGCAGGAGCAACACATCCTCGTGGTCTCGTTCGGCCCGGCCA
AGATGGCCCTGGTCGCTTACGACCCCCTCCTCGGCCGGCTGGGTACCCTC
TCCATCCACAACTTCGACGCGGACGCCATCGGCCCCGGCGCCGGTGGCAT
CGAGTCCGGGTACGGCCTGGCCTCCGCCCTTAAGGACCGCCCGGCGACGA
TCTCCGCCAGCGACCCGTCGGGCCGCTGCCTCGCCGCCGTCGTCGCCGGC
TGCCAGCTGGTCGTGCTGCCCACCCGGAGGCACGTGTCCCCGTCGGTGTT
TGTCAGCGAGGAGGCACGACGGCGCGCGCAACAGCTCCGGCGGCGACGGC
GGCGGATGAGGGAACTCCGGAGAAGAGGAGCGGAGGGAGCAGGGTTCAGC
AGCAGCGGCGCCGGCGGCAGCAGGAGCAACACATCCTCGTGGTCTCGTTC
GGCCCGGCCAAGATGGCCCTGGTCGCTTACGACCCCCTCCTCGGCCGGCT
GGGTACCCTCTCCATCCACAACTTCGACGCGGACGCCATCGGCCCCGGCG
CCGGTGGCATCGAGTCCGGGTACGGCCTGGCCTCCGCCCTTAAGGACCGC
CCGGCGACGATCTCCGCCAGCGACCCGTCGGGCCGCTGCCTCGCCGCCGT
CGTCGCCGGCTGCCAGCTGGTCGTGCTGCCCACCCGGAGGCACGTGTCCC
CGTCGGTGTTTGTCAGCGAGGAGGCACGACGGCGCGCGCAACAGCTCCGG
CGGCGACGGCGGCGGATGAGGGAACTCCGGAGAAGAGGAGCGGAGGGAGC
AGGGTTCCGTAACGGTAACGCCGGTGTTGCCGGTGGAGGTCGAGGGGGTG
GCAGGAGTGGCGAGGGAGGGAGGGAGGGGGTCTCGGACGCCGCAGGCGGG
GGAGGTGGGGACGGGTCGCCCGCGAACGGTGGGTCAACGGATGGGGGGGT
GCGTCTGGCGGTTTTGAAACCGTTCACGATAAATCTCGAGGAAGCCGGCT
TCACTGGCCGTAACGGTAACGCCGGTGTTGCCGGTGGAGGTCGAGGGGGT
GGCAGGAGTGGCGAGGGAGGGAGGGAGGGGGTCTCGGACGCCGCAGGCGG
GGGAGGTGGGGACGGGTCGCCCGCGAACGGTGGGTCAACGGATGGGGGGG
TGCGTCTGGCGGTTTTGAAACCGTTCACGATAAATCTCGAGGAAGCCGGC
TTCACTGGGTCTATAAAAGCTGCAACGTTTCTAGAGGGTTTCCACGAGCC
CGCGCTAGCGATACTGTACGAGCCGATTCAGACCTACGCGGGTCGGCTGG
CGTCGATGCGGTCCACGTGTCGGCTGGTGCTGCTGTCCGTCAACTTGACC
CAGGTCTATAAAAGCTGCAACGTTTCTAGAGGGTTTCCACGAGCCCGCGC
TAGCGATACTGTACGAGCCGATTCAGACCTACGCGGGTCGGCTGGCGTCG
ATGCGGTCCACGTGTCGGCTGGTGCTGCTGTCCGTCAACTTGACCCAGGG
TCGGGCGCCGGTCATCTGGCAGATCGACAACCTGCCCCACGATAGCTGGG
ACCTGATCGCAGTACCCTCGCCAATAGGGGGGGTACAGGGTCGGGCGCCG
GTCATCTGGCAGATCGACAACCTGCCCCACGATAGCTGGGACCTGATCGC
AGTACCCTCGCCAATAGGGGGGGTACAGGTGATTTCGACGAACGCGGTGT
TGCACGTGAACCAGTCGGAGGTGCTGTCTATCCTTGCCGTCAACGGATAC
GCAAGGGCCACCGTGGAAGACGGGCTGCTGGGTTGTCCTCTGCGCGGTGG
GGACAACGACTGGGGGTGGGCATCGTTCAGGTGATTTCGACGAACGCGGT
GTTGCACGTGAACCAGTCGGAGGTGCTGTCTATCCTTGCCGTCAACGGAT
ACGCAAGGGCCACCGTGGAAGACGGGCTGCTGGGTTGTCCTCTGCGCGGT
GGGGACAACGACTGGGGGTGGGCATCGTTCAGGCACTCGAAGTCAGCTCT
CGAGGTTGTGGACCTCAGCTCGTACGACGTGTGCATCGAGCTGGACGTGG
TGCGCTGTGCCTTTCTCACCCCCACGTCTCTGCTTCTCTCGCTTCGCGGC
GGGGAGGTCTACGCGCTCCGCTTGCATCTCGCCGACAGCGGAAGCGGCGG
GGGCGGCGGGGGCGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCA
ACGCGCCTGATCGAGTGATCGGACAGTCATTACGCCCCATCGGCCGAGCT
TCTCCCTGTTCCGTGCTTGCCGTGTCGGCGGGGAAGAGGGACGTAGAGAT
CGGTGGAGGCGGGGCCGGAAGCGGGGGCGGGGGCGGGAGTGGGGGCGGTG
CTCGGTCATCAACGGGGTTGGTGTTCATGGGGTCTAGGGTCGGCGACTCG
CTTCTCGTAAAGTACGGCGTCGAGAGCGCGGGCACGCGACCGGGAGCGCG
CGGGGAGAGGGCGGTGAAGCGCGAGCCTAAGAAAGAGGAGGAGGAGGAGG
AGGAGGCAGATGTGGTGACGGCATTGAGAAGCGGGGGGTGGGCGGGGGAG
GAGGAGGAGGAAAAGGGGGCGGGGCCGGTAGGGCTTCTAAACCCGAGATC
CGGCGCAGAGGTAAAATCTGAGGAATCGCGGAAGGAGGCTGAGGGTGGCG
CCGCCGCAGGCGGTGTAGCCGGCAGAGACGCCCCCGCGGCGGCCTCGGCG
GCGGAGGCCTCACGCGTGTCCGAGGCGGGCGAAGAAGAGACTGGTGGAAA
GCAGGCGGCGGGGGACGTGGCCCAGGGTCAGGTGGCGGTCAAGATGGAGA
CCGGGTCTGACGGAGCCGAAGTGGCGGGCGTAGGTGGCGGTATTGGTGCC
CCAGGAAGAGATATTGGCGGCGACGGTGCTGACGCCGCAGCGGCACTCGA
AGTCAGCTCTCGAGGTTGTGGACCTCAGCTCGTACGACGTGTGCATCGAG
CTGGACGTGGTGCGCTGTGCCTTTCTCACCCCCACGTCTCTGCTTCTCTC
GCTTCGCGGCGGGGAGGTCTACGCGCTCCGCTTGCATCTCGCCGACAGCG
GAAGCGGCGGGGGCGGCGGGGGCGGTAGTGGTGGTGGTGGTGGTGGTGGT
GGTGGTGGCAACGCGCCTGATCGAGTGATCGGACAGTCATTACGCCCCAT
CGGCCGAGCTTCTCCCTGTTCCGTGCTTGCCGTGTCGGCGGGGAAGAGGG
ACGTAGAGATCGGTGGAGGCGGGGCCGGAAGCGGGGGCGGGGGCGGGAGT
GGGGGCGGTGCTCGGTCATCAACGGGGTTGGTGTTCATGGGGTCTAGGGT
CGGCGACTCGCTTCTCGTAAAGTACGGCGTCGAGAGCGCGGGCACGCGAC
CGGGAGCGCGCGGGGAGAGGGCGGTGAAGCGCGAGCCTAAGAAAGAGGAG
GAGGAGGAGGAGGAGGCAGATGTGGTGACGGCATTGAGAAGCGGGGGGTG
GGCGGGGGAGGAGGAGGAGGAAAAGGGGGCGGGGCCGGTAGGGCTTCTAA
ACCCGAGATCCGGCGCAGAGGTAAAATCTGAGGAATCGCGGAAGGAGGCT
GAGGGTGGCGCCGCCGCAGGCGGTGTAGCCGGCAGAGACGCCCCCGCGGC
GGCCTCGGCGGCGGAGGCCTCACGCGTGTCCGAGGCGGGCGAAGAAGAGA
CTGGTGGAAAGCAGGCGGCGGGGGACGTGGCCCAGGGTCAGGTGGCGGTC
AAGATGGAGACCGGGTCTGACGGAGCCGAAGTGGCGGGCGTAGGTGGCGG
TATTGGTGCCCCAGGAAGAGATATTGGCGGCGACGGTGCTGACGCCGCAG
CGGGCTGGGGGGAAGGGAAAGAAGGTGAAATGAAAGACGAGGAGGACGAG
GAGGACGAGGACGAGGAGGAGGACGAGGACGAGGAGGACGAGAAGGGGGG
GGAGGGGGGGAAGGGGGTCAGCACCCGAGGCACCGCGGCAGCAGCCGCAG
CCGCAGCGAGTGACGACGATGACCCCCCTAAGAAAAGGATTCGCGTCTCG
AACGCGGCGAGGGTTAAAAAGGTGGCGCCCGACGCCACCGGTGATGAGGA
GGGTCAGGCGGTAGCGGCGGGATGGACCGAACCCGAAAAACGAGCGCAAG
AAAGCTTGGCGGCGCGGCGGGCTACTAGTGTGGCGGACGGTGGTACGACC
GATTCCGCCGCCGCCGCTCCTGCTGCTGCTACTGCCGCTGCTGCTACGTT
GGCGGCGGGGGTGGCGACGATGAAAGCTGACCGAGAATCGGTAGCAGCGG
CTAACGCGGCCCCTCTTGAGGCGCTCAGCCGAAGAGAGCGCGAAATGGTC
GAAGAGGAAGAGCAGCTGTATGGCGCGAGGCTCGGTTCCTCGACCGTGGG
GAAGGTCGTCGTTGGGCGGGACCTGGTGCACCTGGGGCCTCGGGGGGAGG
AGCGCACGATCGAGGCGGTTGGGTTTCGGCTAAAGGTGGGCTGGGGGGAA
GGGAAAGAAGGTGAAATGAAAGACGAGGAGGACGAGGAGGACGAGGACGA
GGAGGAGGACGAGGACGAGGAGGACGAGAAGGGGGGGGAGGGGGGGAAGG
GGGTCAGCACCCGAGGCACCGCGGCAGCAGCCGCAGCCGCAGCGAGTGAC
GACGATGACCCCCCTAAGAAAAGGATTCGCGTCTCGAACGCGGCGAGGGT
TAAAAAGGTGGCGCCCGACGCCACCGGTGATGAGGAGGGTCAGGCGGTAG
CGGCGGGATGGACCGAACCCGAAAAACGAGCGCAAGAAAGCTTGGCGGCG
CGGCGGGCTACTAGTGTGGCGGACGGTGGTACGACCGATTCCGCCGCCGC
CGCTCCTGCTGCTGCTACTGCCGCTGCTGCTACGTTGGCGGCGGGGGTGG
CGACGATGAAAGCTGACCGAGAATCGGTAGCAGCGGCTAACGCGGCCCCT
CTTGAGGCGCTCAGCCGAAGAGAGCGCGAAATGGTCGAAGAGGAAGAGCA
GCTGTATGGCGCGAGGCTCGGTTCCTCGACCGTGGGGAAGGTCGTCGTTG
GGCGGGACCTGGTGCACCTGGGGCCTCGGGGGGAGGAGCGCACGATCGAG
GCGGTTGGGTTTCGGCTAAAGGTG
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