mRNA_M-pyrifera_M_contig92166.21339.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig92166.21339.1
Unique NamemRNA_M-pyrifera_M_contig92166.21339.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: A0A7S0UPK6_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UPK6_9CHLO)

HSP 1 Score: 117 bits (292), Expect = 3.330e-30
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGV-PTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            ++ NA    LR+ +G AAAGLHSMRDEHFGIGVVE MAAGAV +AH+SGGP+ DIV   DGV   G  A T  EYA +I +VL+    D        W   A AG++ +K+FS ++F+  FLK++GP+L
Sbjct:   95 WYVNAPYSELRRLLGEAAAGLHSMRDEHFGIGVVEYMAAGAVAIAHNSGGPKSDIVTV-DGVGKRGYLAETPEEYANSIIKVLSMTEED--------WCRIASAGQESSKRFSTQNFQRDFLKSMGPIL 214
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: A0A0K9NSW7_ZOSMR (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NSW7_ZOSMR)

HSP 1 Score: 118 bits (295), Expect = 9.320e-29
Identity = 63/129 (48.84%), Postives = 82/129 (63.57%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVLF 387
            FH + +   L Q +G A AGLHSM DEHFGI VVE MAAGA+P+AH+S GP+MDIV++ DG  TG  AS   EYA AI  VL  + ++R           A A RK A++FS++ F E F  A+ P+L+
Sbjct:  339 FHRDISYSDLIQLLGSAVAGLHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLKEDGSSTGFLASDVEEYADAIVNVLGMSEKERI--------QIAEAARKRAQRFSEQRFYEDFKDAIQPILY 459
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: A0A6I9RBF4_ELAGV (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RBF4_ELAGV)

HSP 1 Score: 117 bits (294), Expect = 1.310e-28
Identity = 64/128 (50.00%), Postives = 80/128 (62.50%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            FH + T   L Q +G A AGLHSM DEHFGI VVE MAAGA+P+AH+S GP+MDIV+E DG  TG  AS   EYA AI  +L     +R         A   A RK A++FS++ F E F  A+GP++
Sbjct:  341 FHKDVTYRELVQLLGGAVAGLHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGCQTGFLASDKEEYADAILEILKMPENERL--------AIVAAARKRAQRFSEQKFYEDFKAAIGPII 460
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: UPI001CF9E2AB (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9E2AB)

HSP 1 Score: 115 bits (287), Expect = 1.250e-27
Identity = 65/128 (50.78%), Postives = 79/128 (61.72%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            FH N     L + +G A AG+HSM DEHFGI VVE MAAGAVP+AH+S GPRMDIV+E DG PTG  A  A EYA AI +V+     +R           A A R+ A +FS++ F E F  A+ PVL
Sbjct:  340 FHKNVMYRDLVKLLGGALAGIHSMTDEHFGISVVEYMAAGAVPIAHNSAGPRMDIVLEEDGQPTGFLAQNAEEYAEAILQVVRMPESERL--------KMAAAARRRAGRFSEQRFYEDFKAAIRPVL 459
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: UPI001CFAE83B (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFAE83B)

HSP 1 Score: 114 bits (286), Expect = 1.740e-27
Identity = 65/129 (50.39%), Postives = 78/129 (60.47%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVLF 387
            FH N     L   +G A AG+HSM DEHFGI VVE MAAGA+P+AH+S GPRMDIV+E DG PTG     A EYA AI +V+     +R         A A A R+ A +FS + F E F  A+ PVLF
Sbjct:  340 FHKNVKYRDLLTLLGGAVAGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPRMDIVLEEDGQPTGFLVQNAEEYADAILQVVRMPETERL--------AMAAAARRRAGRFSAQRFCEDFKTAIRPVLF 460
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: A0A1J7HVE5_LUPAN (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=3 Tax=Lupinus TaxID=3869 RepID=A0A1J7HVE5_LUPAN)

HSP 1 Score: 114 bits (285), Expect = 2.010e-27
Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            FH N T   L + +G A AG+HSM DEHFGI VVE MAAGA+P+AH+S GP+MDIV++ DG  TG  A    EYA AI R++     +R           A A RK A++FS++ F + F  AL P+L
Sbjct:  321 FHKNITYRELVRLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGEQTGFLACNVDEYADAILRIIRMPEMERL--------VMASAARKRARRFSEQRFYDDFKAALRPIL 440
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: A2ZM42_ORYSI (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=3 Tax=Oryza TaxID=4527 RepID=A2ZM42_ORYSI)

HSP 1 Score: 112 bits (280), Expect = 2.730e-27
Identity = 64/128 (50.00%), Postives = 79/128 (61.72%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            FH + +   L Q +G A AGLHSM DEHFGI VVE MAAGA+P+AH S GP MDIV++ DG  TG  AS   EYA AI +VL         P+A +    A A RK A++FS+  F E F  A+ P+L
Sbjct:  220 FHKDISYRDLVQLLGGAVAGLHSMTDEHFGISVVEYMAAGAIPIAHRSAGPMMDIVLDEDGQQTGFLASEKEEYAEAIVKVL-------RMPEA-ERHEMATAARKRAQRFSEHRFHEDFTDAVRPIL 339
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: UPI001F5C2B98 (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C2B98)

HSP 1 Score: 113 bits (283), Expect = 4.460e-27
Identity = 64/128 (50.00%), Postives = 79/128 (61.72%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            FH + +   L Q +G A AGLHSM DEHFGI VVE MAAGA+P+AH S GP MDIV+E DG  TG  AS   E+  AI +VL  A  +R           A A RK A++FS++ F E F +A+ PVL
Sbjct:  337 FHKDVSYSDLVQLLGGAIAGLHSMTDEHFGISVVEYMAAGAIPIAHKSAGPMMDIVLEEDGHQTGFLASEKEEFTEAILKVLRMAEPER--------QEMAAAARKRAQRFSEQRFHEDFTEAVRPVL 456
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BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: A0A5C7GZ99_9ROSI (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GZ99_9ROSI)

HSP 1 Score: 113 bits (283), Expect = 4.580e-27
Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            FH N     L + +G A AG+HSM DEHFGI VVE MAAGA+P+AH+S GP+MDIV+E DG  TG  A  A EYA AI +++   + +R           A A R+ A +FS++ F E F  A+ PVL
Sbjct:  339 FHKNVMYRDLVKLLGGAVAGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAILKIIRMPVTERL--------TMAAAARQRASRFSEQRFYEDFKTAIRPVL 458
[Close]
BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Match: A0A0D9Y0X3_9ORYZ (GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase n=17 Tax=Poaceae TaxID=4479 RepID=A0A0D9Y0X3_9ORYZ)

HSP 1 Score: 113 bits (282), Expect = 6.070e-27
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 1 
Query:    1 FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGGPRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDATAHAGRKHAKQFSDEHFRERFLKALGPVL 384
            FH + +   L Q +G A AGLHSM DEHFGI VVE MAAGA+P+AH S GP MDIV+E DG  TG  AS   EYA AI +VL         P+A   +  A A RK A++FS++ F E F  A+ P+L
Sbjct:  334 FHKDISYRDLVQLLGGAVAGLHSMTDEHFGISVVEYMAAGAIPIAHKSAGPMMDIVLEEDGHQTGFLASQKEEYAEAIVKVL-------RMPEAERQEMAALA-RKRAQRFSEKRFHEDFTDAVRPIL 453
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig92166.21339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0UPK6_9CHLO3.330e-3051.16Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A0K9NSW7_ZOSMR9.320e-2948.84GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
A0A6I9RBF4_ELAGV1.310e-2850.00GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
UPI001CF9E2AB1.250e-2750.78GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
UPI001CFAE83B1.740e-2750.39GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
A0A1J7HVE5_LUPAN2.010e-2747.66GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
A2ZM42_ORYSI2.730e-2750.00GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
UPI001F5C2B984.460e-2750.00GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
A0A5C7GZ99_9ROSI4.580e-2747.66GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]
A0A0D9Y0X3_9ORYZ6.070e-2750.78GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosylt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig92166contigM-pyrifera_M_contig92166:5..394 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score115.2
Seed ortholog evalue2.4e-23
Seed eggNOG ortholog42345.XP_008785927.1
KEGG koko:K03844
KEGG ReactionR06127,R06128
KEGG Pathwayko00510,ko00513,ko01100,map00510,map00513,map01100
KEGG ModuleM00055
Hectar predicted targeting categoryother localisation
GOsGO:0000026,GO:0000030,GO:0001101,GO:0003674,GO:0003824,GO:0004376,GO:0004377,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006490,GO:0006629,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009832,GO:0009987,GO:0010033,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0031984,GO:0033577,GO:0033993,GO:0034645,GO:0036211,GO:0042175,GO:0042221,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0070085,GO:0071554,GO:0071669,GO:0071704,GO:0071840,GO:0097305,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901700
EggNOG free text desc.Asparagine-linked glycosylation protein 11 homolog
EggNOG OGs37JC7@33090,3G83J@35493,3KNGB@4447,COG0438@1,KOG1387@2759
EC2.4.1.131
COG Functional cat.M
CAZyGT4
Best tax levelLiliopsida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons1
Model size390
Cds size390
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.8116982-CDS-M-pyrifera_M_contig92166:4..3941622816834.8116982-CDS-M-pyrifera_M_contig92166:4..394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92166 5..394 +
1692278206.2484603-CDS-M-pyrifera_M_contig92166:4..3941692278206.2484603-CDS-M-pyrifera_M_contig92166:4..394Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig92166 5..394 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig92166.21339.1prot_M-pyrifera_M_contig92166.21339.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig92166 5..394 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig92166.21339.1

>prot_M-pyrifera_M_contig92166.21339.1 ID=prot_M-pyrifera_M_contig92166.21339.1|Name=mRNA_M-pyrifera_M_contig92166.21339.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
FHTNATLDALRQWMGRAAAGLHSMRDEHFGIGVVELMAAGAVPVAHDSGG
PRMDIVVEHDGVPTGLRASTASEYATAIARVLAGAIRDRTFPDAIDWDAT
AHAGRKHAKQFSDEHFRERFLKALGPVLF*
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mRNA from alignment at M-pyrifera_M_contig92166:5..394+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig92166.21339.1 ID=mRNA_M-pyrifera_M_contig92166.21339.1|Name=mRNA_M-pyrifera_M_contig92166.21339.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig92166:5..394+ (Macrocystis pyrifera P11B4 male)
TTTCACACCAATGCCACTCTTGATGCACTACGACAATGGATGGGACGTGC
TGCAGCTGGTTTGCATTCCATGCGTGATGAACATTTTGGAATTGGTGTCG
TGGAATTGATGGCAGCTGGTGCTGTTCCTGTTGCGCATGATTCAGGTGGC
CCACGCATGGATATTGTAGTGGAACATGATGGCGTCCCAACCGGTCTCCG
AGCATCCACTGCGTCTGAATATGCTACTGCCATTGCACGAGTATTGGCTG
GAGCGATTCGTGATCGTACATTTCCAGATGCCATCGATTGGGATGCAACT
GCACATGCTGGAAGAAAACACGCCAAGCAATTTTCAGATGAGCATTTTAG
GGAACGGTTCTTGAAGGCATTGGGGCCAGTGTTATTTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig92166:5..394+

>mRNA_M-pyrifera_M_contig92166.21339.1 ID=mRNA_M-pyrifera_M_contig92166.21339.1|Name=mRNA_M-pyrifera_M_contig92166.21339.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig92166:5..394+ (Macrocystis pyrifera P11B4 male)
TTTCACACCAATGCCACTCTTGATGCACTACGACAATGGATGGGACGTGC
TGCAGCTGGTTTGCATTCCATGCGTGATGAACATTTTGGAATTGGTGTCG
TGGAATTGATGGCAGCTGGTGCTGTTCCTGTTGCGCATGATTCAGGTGGC
CCACGCATGGATATTGTAGTGGAACATGATGGCGTCCCAACCGGTCTCCG
AGCATCCACTGCGTCTGAATATGCTACTGCCATTGCACGAGTATTGGCTG
GAGCGATTCGTGATCGTACATTTCCAGATGCCATCGATTGGGATGCAACT
GCACATGCTGGAAGAAAACACGCCAAGCAATTTTCAGATGAGCATTTTAG
GGAACGGTTCTTGAAGGCATTGGGGCCAGTGTTATTTTAATTTCACACCA
ATGCCACTCTTGATGCACTACGACAATGGATGGGACGTGCTGCAGCTGGT
TTGCATTCCATGCGTGATGAACATTTTGGAATTGGTGTCGTGGAATTGAT
GGCAGCTGGTGCTGTTCCTGTTGCGCATGATTCAGGTGGCCCACGCATGG
ATATTGTAGTGGAACATGATGGCGTCCCAACCGGTCTCCGAGCATCCACT
GCGTCTGAATATGCTACTGCCATTGCACGAGTATTGGCTGGAGCGATTCG
TGATCGTACATTTCCAGATGCCATCGATTGGGATGCAACTGCACATGCTG
GAAGAAAACACGCCAAGCAATTTTCAGATGAGCATTTTAGGGAACGGTTC
TTGAAGGCATTGGGGCCAGTGTTATTTTAA
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