mRNA_M-pyrifera_M_contig9213.21334.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9213.21334.1
Unique NamemRNA_M-pyrifera_M_contig9213.21334.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: D7FWN2_ECTSI (Aminodeoxychorismate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN2_ECTSI)

HSP 1 Score: 619 bits (1597), Expect = 2.620e-202
Identity = 361/622 (58.04%), Postives = 411/622 (66.08%), Query Frame = 1
Query:    1 GFDQVDSNRDDQNAGDAVYTLLIDNYDSYTYNLFQQLAVINGRAPFVVYNDDEGGDLWKSIERMGRVPDNIVISPGPGRPDVVADFGMCAQALREAIHIPVLGVCLGYEGLGMEHGAKVVHAREPMHGRLSPIFHD-EDPLFRGVPQGASVVRYHSLVVDRATLPAGGPLKATAWTGDGVLMAMRHTEYPHWGVQFHPESVGTEHGSDIVGNFRDLTVDWRRARGSGRREGDARASRTVPNGGATRIGGPGMA--------------GLSDRG-GKPGAIAPAFPVPEDAVGSLESGEE------------TAFATGERSRSRRQRPTARRR-PFVLHVQEVAMTGMLDEGGGGENGVGEPV--PGAPMPDTELAFRLLHGDDPTAWWLDSSSQRPGLAVDGQAKARFTFMGGADGPLSELIECYGDDRLVIQRGGGKRRDGEATTNKGERREVRANILDYLKARMSQMGHA-SGVASNDSLEIRMVGENMAGTGEALSGGGKGDPVGEEG-------GGTTLPFDFVGGFVGFLGYELRHEANDVLGRSAGGTEWDWQAPGGGQWDEETFEG------ERKRSPDAVAGSVKVTSG----GKDIEGAMREGGGGGMFP*GF 1719
            G D   ++R D   G  V+TLLIDNYDSYTYNLFQ LAV+NGRAPFVV+NDD+ GDLWK+IERMGRVPDNIVISPGPGRPDV  DFGMCAQAL EA+ IP+LGVCLG+EGLG+EHGA V  A EPMHGRLSP+FHD +D LFRGVPQG+ VVRYHSLVVD  TLPA GPL+ATAWTGDGVLMAMRH E PHWGVQFHPESVGT HGSDIV NFRDLTV W   RG+              NGG   IGG G+A              G+   G GKP A+         A+    S E             TA A+      RR RP +RRR PFVL V+EV M G+    G    G G+      + MPDTE AFR+L+GDD TAWWLDSSSQRPGLAVDGQAKARFTFMGGADGPLS+ IECYG  RLVIQR  G+  D     N G RREVRANI+DYLKA +++MGHA S   ++  +EI MVG      G   SG    D   ++G       G   LPFDFVGGFVGFLGYELRHEA DV+ RSAGGTEWDWQ PGGG+W++  F G      +R    ++ + +V V SG    G D    +R+G  GG  P GF
Sbjct:  108 GEDTTSTDRGDAAPGADVHTLLIDNYDSYTYNLFQLLAVVNGRAPFVVFNDDDDGDLWKTIERMGRVPDNIVISPGPGRPDVPKDFGMCAQALSEAVDIPILGVCLGHEGLGLEHGATVTRAPEPMHGRLSPVFHDGQDALFRGVPQGSRVVRYHSLVVDGDTLPAEGPLRATAWTGDGVLMAMRHEERPHWGVQFHPESVGTRHGSDIVRNFRDLTVAWHGGRGA------------AANGGGVGIGG-GIASPTASMRLQRGLPSGMVRNGYGKPRAVRETAARASSALFPRSSAETAADVAIPVVADTTAAASVPLPDHRRSRPASRRRKPFVLLVEEVDMAGIALNNGDEGRGPGDSRRRSRSTMPDTEHAFRVLYGDDRTAWWLDSSSQRPGLAVDGQAKARFTFMGGADGPLSQTIECYGGGRLVIQRARGE--DAVGAENGGNRREVRANIMDYLKAEVAKMGHANSREGASGGIEIHMVGNG----GGPCSGNLGVDDTDDDGRARNDGDGRGALPFDFVGGFVGFLGYELRHEATDVMRRSAGGTEWDWQPPGGGKWEDSAFAGKAAVHSDRVSPGESASTAVPVGSGEGHAGVDGSADLRQG--GGDVPLGF 708          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: A0A836CDI0_9STRA (ADC synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDI0_9STRA)

HSP 1 Score: 329 bits (844), Expect = 2.980e-97
Identity = 193/397 (48.61%), Postives = 240/397 (60.45%), Query Frame = 3
Query: 1701 DVPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADALDWIERTSKCLR----TICLQTGEGRRVESVSPRDTSPPIVDEV----TTTACSMDVPRSRYERSLEEIMRLVGEGETYEVCLTNQIVC---------------ERPGGGMT-PPLDIYSRLRRSNPAPYAAYIVHDPHSRLSACA-AGGTSLTEGGETG------PAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVVS 2798
            +VP+GF +  DRF+AFDH E +AYVL+  D+                           A A DW+E T   L+    T   +T     V          P++ +V        C     + RYE+ L E + L+G+GETYEVCLTNQ++C               + P G +  PPL++Y RLRR NPAPYAA++ HDP  + SA A   GT+  +   T       PAFAVCCSSPE+F++++  G  ESKPIKGT  RGKT  ED+ LA  LA  EK +AENLMI DLVRND+GRVC  GSV VPKLM +E+YATVHQ+V+T+RGQL  G  ALDA+AAAFP GSMTGAPK RTMEIID+LE   PRGVYSGS+GFL   G AD N+VIRT VV+
Sbjct:  190 NVPMGFWIKADRFIAFDHDEHRAYVLSTADS---------------------------AGASDWVESTVLKLQELASTHAAKTVANGHVXXXXXXXXXXPLMHDVKHHDVGMKCRTSRSKQRYEQDLREALALIGQGETYEVCLTNQVICRADQSHDSYGSYSSAQSPSGILNEPPLELYCRLRRKNPAPYAAFLFHDPSGQFSAGAFPSGTAFEQQLFTEEQVPPQPAFAVCCSSPERFVRLERGGIIESKPIKGTAPRGKTHQEDVALAKALASCEKAIAENLMIADLVRNDMGRVCEVGSVHVPKLMTIETYATVHQMVTTVRGQLRSGLTALDAVAAAFPPGSMTGAPKIRTMEIIDKLEDHAPRGVYSGSLGFLSRGGQADLNVVIRTGVVT 559          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: Q3M7G1_TRIV2 (Aminodeoxychorismate synthase n=6 Tax=Nostocaceae TaxID=1162 RepID=Q3M7G1_TRIV2)

HSP 1 Score: 298 bits (763), Expect = 3.240e-85
Identity = 188/393 (47.84%), Postives = 224/393 (57.00%), Query Frame = 3
Query: 1635 FGKGNVGWKGYRRSYARGRG---GGDVPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADALDWIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDVPRS--RYERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTPPLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVVS 2798
            F  G VG+ GY      G G       P   L+  DR +AFDHQE   Y++ L  AP                       G  A A DW E T K LRT+                   PP+V   T+   +  + RS   Y+  +   ++ + EGETY+VCLTNQ+  +      T PL  Y RLR+ NPAPY+A++                     GE     A+ CSSPE+FL++D QGW E+KPIKGTV+RG+TP ED  L   L   EK  AENLMIVDL+RNDLGRVC+ GS+ VPKLM VESYATVHQLVSTIRG LSP   A D I  AFPGGSMTGAPK RTMEIID+LE    RGVYSG+IGFLGVNGAAD NIVIRTAV++
Sbjct:  330 FNCGFVGYFGYELKAESGSGLEHPSSCPDAILLLSDRLIAFDHQEQTTYLVYL--APV----------------------GETAPAKDWFEITEKRLRTL----------------PPLPPLVPSTTSHPVTFRLSRSYQTYKDDISRCLKEIREGETYQVCLTNQLRTDTT----TDPLTFYRRLRQVNPAPYSAFLRF-------------------GE----MAIACSSPERFLQIDRQGWVETKPIKGTVRRGETPEEDFLLRESLRSSEKEQAENLMIVDLLRNDLGRVCQVGSIHVPKLMDVESYATVHQLVSTIRGFLSPDMDATDCIRMAFPGGSMTGAPKLRTMEIIDQLEQ-EARGVYSGAIGFLGVNGAADLNIVIRTAVLT 654          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: A0A1B7W6J6_9NOST (Aminodeoxychorismate synthase (Fragment) n=1 Tax=Anabaena sp. MDT14b TaxID=1710886 RepID=A0A1B7W6J6_9NOST)

HSP 1 Score: 286 bits (733), Expect = 1.480e-83
Identity = 180/393 (45.80%), Postives = 222/393 (56.49%), Query Frame = 3
Query: 1647 NVGWKGYRRSYARGRGGGD------VPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADALDWIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDVPRSR--YERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTP-PLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVVS 2798
            N G+ GY     +   GG       +P    +  DR +A DHQE   Y+L L+                          G  A A DW E                 +++++ P     PIV +   T     + RS   Y   +E+ ++ + EGETY+VCLTNQI  +      TP PLD Y  LRR NPAPYAA++                     G+ G    + CSSPE+FL++D QGWAE+KPIKGT+ RGKTPAED  L   L   EK+ AENLMIVDL+RNDLGRVC  G+V VPKLM VE+YATVHQLV+TIRGQL     A+D I  AFPGGSMTGAPK RT+EIIDRLE    RGVYSG+IGFLG+NG+AD NIVIRTAV++
Sbjct:   57 NCGFVGYFGYELKAESGGKFNHTSALPDAMFMLADRMIAIDHQEQTIYLLCLI------------------------QKGKTASAEDWFEAIKN-------------QIDNLPPLS---PIVPQNKKTPVIFRLSRSEKTYLDDIEKCLQEIHEGETYQVCLTNQIYTDT-----TPDPLDFYRSLRRINPAPYAAFLRF-------------------GDVG----IACSSPERFLQIDRQGWAETKPIKGTLPRGKTPAEDFILCEQLRNSEKDRAENLMIVDLLRNDLGRVCAVGTVHVPKLMDVETYATVHQLVTTIRGQLRANMSAIDCIRNAFPGGSMTGAPKIRTLEIIDRLEQ-EARGVYSGAIGFLGLNGSADLNIVIRTAVLT 380          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: UPI0018F016E2 (aminodeoxychorismate synthase component I n=2 Tax=Anabaena azotica TaxID=197653 RepID=UPI0018F016E2)

HSP 1 Score: 294 bits (752), Expect = 2.780e-83
Identity = 177/368 (48.10%), Postives = 216/368 (58.70%), Query Frame = 3
Query: 1704 VPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADALDWIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDVPRS--RYERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTP-PLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVVS 2798
            VP   L+  DR +AFDHQE   Y++ L                        T  G  A A  W+E T K LRT+                   PP+V  +T+   +  + RS  RY+  +   ++ + EGETY+VCLTNQ+  +      TP PL  Y RLR+ NPAPY+A++                            A+ CSSPE+FL++D QGW E+KPIKGTV+RG+TP ED  L   L   EK  AENLMIVDL+RNDLGRVC+ G++ VPKLM VESYATVHQLVSTIRG LSP   A D I  AFPGGSMTGAPK RTMEIID+LE    RGVYSG+IGFLG+NGAAD NIVIRTAV++
Sbjct:  387 VPDAILLLSDRLIAFDHQEQTTYLVYL------------------------TPVGETASAQAWLELTEKRLRTL----------------PPLPPLVCGMTSQPVTFRLSRSYQRYKDDIYRCLQKIREGETYQVCLTNQLHTDT-----TPDPLTFYRRLRQINPAPYSAFLRFGD-----------------------LAIACSSPERFLQIDRQGWVETKPIKGTVRRGQTPQEDALLCQSLRNSEKERAENLMIVDLLRNDLGRVCQVGTIHVPKLMDVESYATVHQLVSTIRGLLSPNMDATDCIRMAFPGGSMTGAPKLRTMEIIDQLEQ-EARGVYSGAIGFLGLNGAADLNIVIRTAVLT 685          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: UPI00168152C5 (aminodeoxychorismate synthase component I n=1 Tax=Anabaena subtropica TaxID=425380 RepID=UPI00168152C5)

HSP 1 Score: 291 bits (746), Expect = 7.270e-83
Identity = 182/394 (46.19%), Postives = 221/394 (56.09%), Query Frame = 3
Query: 1635 FGKGNVGWKGYRRSYARGRG---GGDVPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADALDWIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDVPRS--RYERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTP-PLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVVS 2798
            F  G VG+ GY      G G       P   L+  DR +AFDHQE   Y++ LV                          G +A A  W E   +CLRT+                   PP+V E+T+   +  + RS   Y+    + +  + EGETY+VCLTNQ+  +      TP PL  Y RLR+ NPAPY+A++                            A+ CSSPE+FL++D QGW E+KPIKGTV RG+TP ED  L   L   EK  AENLMIVDL+RNDLGRVC+ GS+ VPKLM VE+YATVHQLVSTIRG LSP   A D I   FPGGSMTGAPK RTMEIID+LE    RGVYSG+IGFLG+NGAAD NIVIRTAV++
Sbjct:  330 FNCGFVGYFGYELKAECGSGLQHPSAFPDAILLLADRLIAFDHQEQTTYLVHLVPV------------------------GQKAPATAWFELMEECLRTL----------------PPLPPLVSEMTSHPVTFHLSRSYQTYKDDTYKCLEKIYEGETYQVCLTNQLYTDT-----TPDPLTFYRRLRQVNPAPYSAFLRFGD-----------------------MAIACSSPERFLQIDRQGWVETKPIKGTVGRGQTPEEDYLLYESLRNSEKERAENLMIVDLLRNDLGRVCQVGSIHVPKLMDVETYATVHQLVSTIRGCLSPNMDATDCIRMVFPGGSMTGAPKLRTMEIIDQLEQ-EARGVYSGAIGFLGLNGAADLNIVIRTAVMT 654          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: A0A0G4GHK3_VITBC (Aminodeoxychorismate synthase n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GHK3_VITBC)

HSP 1 Score: 295 bits (754), Expect = 2.010e-82
Identity = 183/374 (48.93%), Postives = 223/374 (59.63%), Query Frame = 3
Query: 1704 VPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADAL------DWIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDVPRSRYERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTPPLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRG-KTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQL--SPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVVS 2798
             PL   +FVDR V  DH  G+ Y++ LV         +V         DA   +G   DA        W++   + +     +  E       + R  S  +  E+T      D PR+ YER++ E +  + EGETYEVCLTNQ++ E  G  +  PLD+Y  LRR NPAPY+AYI ++P S  S C                 ++CCSSPE+FL+V   G  ESKPIKGT  R    PA D  +A  L   EK+ AENLMIVDLVRNDLGRVC  GSV VP L+ VESYATVHQLVSTIRGQL  S  C  LDA+ AAFPGGSMTGAPK RT+++I +LE GRPRGVYSGSIG+L VNGA D NIVIRTAVV+
Sbjct:  488 TPLAVWMFVDRLVVLDHLLGRVYLVTLVPLATVDDTAEVPPM------DALRPNGGVPDARVAAMQQQWVDSMWEMVLLCPTEEAEPPHAAIQATRSASVGVEVELTP-----DRPRAVYERNIRECLGWIHEGETYEVCLTNQLIAE--GVRVERPLDLYCMLRRRNPAPYSAYIRYEPKSPSSRC--------------QGLSICCSSPERFLRVTPSGLIESKPIKGTAARDLHDPANDRRIADGLRGSEKDRAENLMIVDLVRNDLGRVCVEGSVEVPHLLAVESYATVHQLVSTIRGQLKASEYC-PLDAVVAAFPGGSMTGAPKHRTIQLIHKLEEGRPRGVYSGSIGYLSVNGAIDLNIVIRTAVVT 833          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: A0A3A8HN04_9DELT (Aminodeoxychorismate synthase (Fragment) n=4 Tax=Corallococcus TaxID=83461 RepID=A0A3A8HN04_9DELT)

HSP 1 Score: 280 bits (716), Expect = 5.500e-81
Identity = 163/316 (51.58%), Postives = 191/316 (60.44%), Query Frame = 3
Query: 1869 PEADALD---WIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDV----PRSRYERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTPPLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVV 2795
            PE +A     W + T   LRT+                   PP+      T     V     R  Y   ++  M  + EGETYEVCLTN+++          PLD+Y  LRR NPAPYAAY+      R+ A                   + CSSPE+FL+VD + W ESKPIKGT++RG TPAED  L   L   EK+ AENLMIVDLVRNDLGRVC  GSV VP+LMHVESYATVHQLVSTIRG L PG  A+DA+ AAFPGGSMTGAPK+RTME+IDRLEG   RGVYSG+IG+    GAAD N+VIRTAVV
Sbjct:  169 PEHEAAQVQAWFDATESSLRTL-------------------PPLAPLEPRTGAPFPVRLARDRETYLADIQRCMEQLHEGETYEVCLTNKLLARTH----VEPLDLYRSLRRLNPAPYAAYL------RMGA-----------------LGIACSSPERFLRVDAERWVESKPIKGTLRRGSTPAEDDQLRQQLGSQEKDRAENLMIVDLVRNDLGRVCEVGSVHVPRLMHVESYATVHQLVSTIRGHLRPGLTAVDAVRAAFPGGSMTGAPKERTMELIDRLEG-EARGVYSGAIGYFSATGAADLNVVIRTAVV 437          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: UPI001412D040 (aminodeoxychorismate synthase component I n=1 Tax=Kineococcus indalonis TaxID=2696566 RepID=UPI001412D040)

HSP 1 Score: 278 bits (710), Expect = 6.390e-81
Identity = 173/386 (44.82%), Postives = 218/386 (56.48%), Query Frame = 3
Query: 1653 GWKGYRRSYARGRGGG------DVPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADALDWIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDVPRSRYERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTPPLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAV 2792
            GW GY     R   G       D P    +F DRF A DH+ G+ +++ALV                     AG ++G E DA  W+ERT   L  +    G   R E  +     PP+ +EV   A  +D  R  YE ++E     +  GE+YEVCLT +   +        PL  + RLRR+NPAPYAA +      RL                 P   V  +SPE+FL+VD  GWAE++P+KGT +RG  PAED  L   LA+  K  AENLMIVDL+RNDLGRVC  GSVSVP LM VE+YAT HQLVST+RG+L PG GALDA+ + FP GSMTGAPK RT E++D LE  R RGVYSG++G+L + GAAD ++VIRT V
Sbjct:   43 GWVGYLGYEVRAECGSPTTRTADTPDAAWLFTDRFAAVDHEAGRTHLVALVRTG------------------AGAAAGAEEDARAWLERTEHALADL---PGAPARPEGAAV----PPLPEEVV--APLLDRTREEYEAAVEACREALRAGESYEVCLTARASTD----AAVDPLTAHRRLRRANPAPYAALL------RL-----------------PGVDVVSASPERFLRVDRDGWAEARPVKGTARRGTGPAEDGLLREGLARDPKTRAENLMIVDLLRNDLGRVCAVGSVSVPSLMAVETYATAHQLVSTVRGRLRPGVGALDAVRSCFPPGSMTGAPKLRTTEVVDALER-RARGVYSGALGYLSLTGAADLSVVIRTLV 373          
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Match: UPI0018EFCE59 (Para-aminobenzoate synthase, subunit I n=3 Tax=Richelia TaxID=98443 RepID=UPI0018EFCE59)

HSP 1 Score: 283 bits (725), Expect = 8.290e-80
Identity = 167/367 (45.50%), Postives = 212/367 (57.77%), Query Frame = 3
Query: 1701 DVPLGFLVFVDRFVAFDHQEGKAYVLALVDAPECGGELDVASDRKHAHGDAGTSSGPEADALDWIERTSKCLRTICLQTGEGRRVESVSPRDTSPPIVDEVTTTACSMDVPRSRYERSLEEIMRLVGEGETYEVCLTNQIVCERPGGGMTP-PLDIYSRLRRSNPAPYAAYIVHDPHSRLSACAAGGTSLTEGGETGPAFAVCCSSPEKFLKVDGQGWAESKPIKGTVKRGKTPAEDLTLAADLAKGEKNMAENLMIVDLVRNDLGRVCRTGSVSVPKLMHVESYATVHQLVSTIRGQLSPGCGALDAIAAAFPGGSMTGAPKQRTMEIIDRLEGGRPRGVYSGSIGFLGVNGAADFNIVIRTAVVS 2798
            ++P  F +  DR +AFDH+E K Y+L L +     GE+D                    DA  W +   K L  +         +E +   D+   ++        S    +  Y   ++  ++ + EGE+Y+VCLTNQ+  +      TP PL  Y  LR  N APY+A++                            AV CSSPE+FL++D QGW E+KPIKGTV RGKTP EDL L   L   EK+ +ENLMIVDL+RNDLG+VC+ GS+ VPKLM VE+YATVHQLV+TIRG L P  GA D I  AFPGGSMTGAPK RTMEIID+LE    RGVYSG+IGFLGVNGAAD NIVIRTA+++
Sbjct:  359 ELPDAFFILADRIIAFDHEEKKTYLLYLAEQ----GEID--------------------DANSWFDLIEKQLHHLLP-------IEPIHSNDSQKSVI-------LSFQRSQQHYLHDIQTCLQKIYEGESYQVCLTNQLTTDT-----TPDPLTFYRVLRNVNAAPYSAFLRFGD-----------------------LAVACSSPERFLRIDAQGWVETKPIKGTVPRGKTPEEDLMLYQQLKNSEKDRSENLMIVDLLRNDLGKVCQVGSIEVPKLMDVETYATVHQLVTTIRGCLRPDMGATDCIQMAFPGGSMTGAPKMRTMEIIDQLESAA-RGVYSGAIGFLGVNGAADLNIVIRTAILT 658          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9213.21334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWN2_ECTSI2.620e-20258.04Aminodeoxychorismate synthase n=2 Tax=Ectocarpus T... [more]
A0A836CDI0_9STRA2.980e-9748.61ADC synthase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
Q3M7G1_TRIV23.240e-8547.84Aminodeoxychorismate synthase n=6 Tax=Nostocaceae ... [more]
A0A1B7W6J6_9NOST1.480e-8345.80Aminodeoxychorismate synthase (Fragment) n=1 Tax=A... [more]
UPI0018F016E22.780e-8348.10aminodeoxychorismate synthase component I n=2 Tax=... [more]
UPI00168152C57.270e-8346.19aminodeoxychorismate synthase component I n=1 Tax=... [more]
A0A0G4GHK3_VITBC2.010e-8248.93Aminodeoxychorismate synthase n=4 Tax=Vitrella bra... [more]
A0A3A8HN04_9DELT5.500e-8151.58Aminodeoxychorismate synthase (Fragment) n=4 Tax=C... [more]
UPI001412D0406.390e-8144.82aminodeoxychorismate synthase component I n=1 Tax=... [more]
UPI0018EFCE598.290e-8045.50Para-aminobenzoate synthase, subunit I n=3 Tax=Ric... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9213contigM-pyrifera_M_contig9213:878..6104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score540.0
Seed ortholog evalue1.2e-150
Seed eggNOG ortholog2880.D7FWN2
KEGG rclassRC00010,RC01418
KEGG koko:K13950
KEGG ReactionR01716
KEGG Pathwayko00790,map00790
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008153,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009110,GO:0009396,GO:0009507,GO:0009536,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0042537,GO:0042558,GO:0042559,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046482,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.4-amino-4-deoxychorismate synthase activity
EggNOG OGsCOG0147@1,COG0512@1,KOG0026@2759,KOG1224@2759
EC2.6.1.85
COG Functional cat.EH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size2798
Cds size1524
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9213.21334.1prot_M-pyrifera_M_contig9213.21334.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9213 3214..4737 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.5916803-UTR-M-pyrifera_M_contig9213:877..11081622816834.5916803-UTR-M-pyrifera_M_contig9213:877..1108Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 878..1108 -
1692278206.128819-UTR-M-pyrifera_M_contig9213:877..11081692278206.128819-UTR-M-pyrifera_M_contig9213:877..1108Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 878..1108 -
1622816834.6018708-UTR-M-pyrifera_M_contig9213:1952..21331622816834.6018708-UTR-M-pyrifera_M_contig9213:1952..2133Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 1953..2133 -
1692278206.1435075-UTR-M-pyrifera_M_contig9213:1952..21331692278206.1435075-UTR-M-pyrifera_M_contig9213:1952..2133Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 1953..2133 -
1622816834.613566-UTR-M-pyrifera_M_contig9213:2540..32131622816834.613566-UTR-M-pyrifera_M_contig9213:2540..3213Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 2541..3213 -
1692278206.152824-UTR-M-pyrifera_M_contig9213:2540..32131692278206.152824-UTR-M-pyrifera_M_contig9213:2540..3213Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 2541..3213 -
1622816834.6401577-UTR-M-pyrifera_M_contig9213:4737..47531622816834.6401577-UTR-M-pyrifera_M_contig9213:4737..4753Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 4738..4753 -
1692278206.1746886-UTR-M-pyrifera_M_contig9213:4737..47531692278206.1746886-UTR-M-pyrifera_M_contig9213:4737..4753Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 4738..4753 -
1622816834.6514702-UTR-M-pyrifera_M_contig9213:5931..61041622816834.6514702-UTR-M-pyrifera_M_contig9213:5931..6104Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 5932..6104 -
1692278206.1837027-UTR-M-pyrifera_M_contig9213:5931..61041692278206.1837027-UTR-M-pyrifera_M_contig9213:5931..6104Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig9213 5932..6104 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.6260273-CDS-M-pyrifera_M_contig9213:3213..47371622816834.6260273-CDS-M-pyrifera_M_contig9213:3213..4737Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9213 3214..4737 -
1692278206.162692-CDS-M-pyrifera_M_contig9213:3213..47371692278206.162692-CDS-M-pyrifera_M_contig9213:3213..4737Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9213 3214..4737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9213.21334.1

>prot_M-pyrifera_M_contig9213.21334.1 ID=prot_M-pyrifera_M_contig9213.21334.1|Name=mRNA_M-pyrifera_M_contig9213.21334.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=508bp
MGRVPDNIVISPGPGRPDVVADFGMCAQALREAIHIPVLGVCLGYEGLGM
EHGAKVVHAREPMHGRLSPIFHDEDPLFRGVPQGASVVRYHSLVVDRATL
PAGGPLKATAWTGDGVLMAMRHTEYPHWGVQFHPESVGTEHGSDIVGNFR
DLTVDWRRARGSGRREGDARASRTVPNGGATRIGGPGMAGLSDRGGKPGA
IAPAFPVPEDAVGSLESGEETAFATGERSRSRRQRPTARRRPFVLHVQEV
AMTGMLDEGGGGENGVGEPVPGAPMPDTELAFRLLHGDDPTAWWLDSSSQ
RPGLAVDGQAKARFTFMGGADGPLSELIECYGDDRLVIQRGGGKRRDGEA
TTNKGERREVRANILDYLKARMSQMGHASGVASNDSLEIRMVGENMAGTG
EALSGGGKGDPVGEEGGGTTLPFDFVGGFVGFLGYELRHEANDVLGRSAG
GTEWDWQAPGGGQWDEETFEGERKRSPDAVAGSVKVTSGGKDIEGAMREG
GGGGMFP*
back to top

mRNA from alignment at M-pyrifera_M_contig9213:878..6104-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9213.21334.1 ID=mRNA_M-pyrifera_M_contig9213.21334.1|Name=mRNA_M-pyrifera_M_contig9213.21334.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5227bp|location=Sequence derived from alignment at M-pyrifera_M_contig9213:878..6104- (Macrocystis pyrifera P11B4 male)
GGCTTCGACCAAGTTGACAGCAATCGTGACGATCAGAACGCAGGTGACGC TGTTTACACCCTCCTGATCGACAACTACGACTCTTACACCTACAACCTGT TTCAGCAGCTGGCGGTAATCAACGGACGTGCACCGTTCGTGGTTTATAAC GATGACGAGGGGGGAGACTTGTGGTGAGTTCTCGAGCGGGTCGTCGGTTA TTCTGTTTACGTATTCTATGTGATGTGTCACGTAAAATGTGTTCCTGGTC GTTGTTGAACCATTTTTGCTTTTCGACACCTGAAAAGTATACGAGGTACC AGGTACCTGGTACACACAAGCACACCAGCGTTGACTACTCTGCTTGCATA CCAGGTATAGTATACTGGCTGCAGCATTGATGCTGCTGTGCTACAAGTAC TGCTGTATTTGTCAGTACCTCTGCTGTGTCGTAGTTTTGTTATCACAGAG CATGTACTGTACGAGTCTCTCATCCGAATAGGGTTAAATGATCGGCACGG ACGCTGCTGGTTGTGCTGCATGTCGACGGCTAAAAATAACGGTTTAATGT GACGAGCACGCGCACCAGCATACCTGCCTGGTACCACAGCAGCAGGTTGC CTGCTGCTGTACTTGTACAAGGTGGCTGGTGGCCAGAAGCGCAGACTGGA CTCGTGTTGAGATGATTTAGCAGTGCGTGTAAAAGGCGAACACTGCAATC AAATTGTACTGGATTGGGCACATCAGTGCCATAGGTGACGAAGACTCTTG CCTGAACCTCACCACTCACACACAATGGTTTTTACTGTACGGTACAGTAG TAGCCCACTGCTGTAACAGGCAAATAAACATGTACCAGTCCATCGCACCA CACCACTTCCAAAGGAATTTGTGCCCGAAACGAGAGTTCAGTCCCTAAGG GGTGACGTAGCTCACACAATTCTCTTCAACTATTAATAGTGATATATTAC AGTAGTAGTATTAATAGTGCAATACTGCTGTGCAGGTAGGAATACACAGC AGTAGAGGAGGAGGGGGTAGAGGAGAAGGGAGGCAAGGTGAAGCAGGGGG GGTGAAGTGTTGCAATCCAGCCAGCTAGAACAGCCCATCAGGCATGCAAT ACATCGCCGAACTCGAACACTCCTACGGCAATTGAAAGCAACCACCTGAG GCAGACTTCGTCGTGCAGCAGTGTTCCTCCGTTCATCGCCATCTCTCCGT CCCTGAGGCAAACTTCGTATAACCATCATGCGGCGGTGTTCCTCCGCTCA TCGCCATGTACGTCGCTGAGGCAAACTTCCTATAACCATCATACATACGG CAGTGCTCCTCCGTTCATCGCCATCTCCATCTCTCCGATATACCCAAACA GGAAATCGATCGAACGCATGGGACGAGTGCCCGACAACATTGTCATCTCC CCCGGCCCAGGACGACCAGACGTGGTGGCCGACTTCGGCATGTGCGCCCA AGCCCTCCGCGAGGCCATCCACATCCCCGTCCTGGGCGTTTGTCTCGGTT ACGAGGGGCTGGGAATGGAGCACGGCGCGAAGGTAGTTCACGCTCGGGAG CCCATGCACGGGCGCCTGTCGCCCATCTTTCACGACGAGGATCCGCTGTT TCGCGGAGTACCGCAAGGCGCCAGCGTGGTGAGATACCACTCGCTCGTTG TCGACAGGGCCACGCTGCCGGCTGGAGGCCCGCTAAAGGCCACGGCGTGG ACAGGGGATGGGGTCTTGATGGCGATGAGACATACCGAGTACCCGCACTG GGGGGTGCAATTTCACCCGGAGAGCGTGGGGACCGAGCACGGGTCAGACA TCGTTGGAAATTTCAGGGATCTGACGGTCGATTGGCGTCGGGCGCGGGGG AGCGGCCGGCGGGAAGGGGATGCAAGAGCTAGCAGAACGGTGCCTAATGG GGGAGCGACACGGATTGGTGGGCCCGGGATGGCTGGCCTATCGGATCGAG GCGGCAAGCCAGGGGCGATTGCGCCGGCTTTCCCGGTTCCCGAGGATGCA GTGGGGTCCCTGGAGTCGGGAGAAGAGACCGCTTTTGCCACGGGTGAGCG CAGTCGCAGTCGTCGTCAGCGTCCCACCGCGAGACGGCGACCCTTCGTGT TGCACGTGCAAGAAGTGGCGATGACAGGGATGCTAGACGAGGGGGGCGGT GGCGAGAACGGCGTTGGCGAGCCGGTGCCGGGTGCGCCTATGCCGGATAC CGAGCTCGCGTTTCGCTTGCTGCATGGGGACGACCCGACGGCGTGGTGGC TGGACAGCAGCAGCCAGAGACCGGGGCTGGCCGTAGACGGCCAAGCGAAA GCCAGATTCACCTTCATGGGTGGCGCTGATGGTCCACTCTCTGAGCTGAT CGAGTGCTACGGCGATGACCGACTGGTTATTCAGCGCGGGGGGGGGAAGA GAAGGGACGGTGAAGCCACCACTAACAAGGGCGAGAGGCGAGAAGTACGC GCCAACATACTGGACTACCTGAAGGCAAGGATGAGTCAGATGGGGCATGC GAGCGGAGTAGCCTCTAACGACAGCCTGGAGATCCGGATGGTAGGGGAGA ACATGGCTGGTACAGGGGAAGCCCTTTCTGGTGGCGGCAAGGGAGACCCC GTTGGCGAGGAGGGGGGCGGGACGACCCTACCCTTTGACTTTGTCGGTGG GTTCGTGGGATTTTTGGGGTACGAGCTTCGGCACGAGGCAAATGATGTTT TGGGGCGGAGCGCAGGGGGAACCGAATGGGACTGGCAGGCGCCGGGGGGT GGGCAGTGGGACGAGGAAACCTTTGAGGGAGAACGTAAGAGAAGCCCTGA TGCGGTCGCGGGTTCGGTAAAGGTAACGTCGGGTGGAAAGGATATCGAAG GAGCTATGCGCGAGGGAGGGGGGGGGGGGATGTTCCCCTAGGGTTTTTGG TGTTCGTGGACCGGTTCGTGGCCTTCGATCACCAGGAGGGTAAGGCTTAC GTGTTAGCTCTGGTGGACGCGCCTGAATGCGGCGGAGAACTTGACGTCGC CAGTGACCGAAAGCACGCGCACGGAGACGCGGGGACTTCCTCTGGCCCCG AAGCAGACGCACTAGACTGGATAGAACGAACCTCGAAATGCCTGAGGACT ATCTGCTTGCAGACCGGGGAAGGCCGGAGAGTAGAATCGGTCTCACCCCG GGACACGTCTCCGCCGATCGTGGATGAAGTGACCACCACAGCCTGTTCCA TGGACGTCCCCCGCTCGAGGTACGAGCGCAGTCTGGAAGAAATCATGCGC CTGGTGGGAGAAGGCGAGACGTACGAGGTCTGCTTGACCAATCAGATCGT GTGCGAGCGCCCGGGGGGCGGGATGACCCCTCCCCTGGATATTTACTCCC GCCTCCGCCGCTCCAACCCCGCGCCGTACGCCGCGTACATCGTGCACGAC CCGCACAGCCGTCTCTCTGCTTGCGCTGCGGGTGGAACGTCGTTGACGGA AGGGGGGGAAACGGGTCCCGCTTTCGCTGTGTGCTGTTCTTCCCCGGAGA AATTTCTGAAGGTTGATGGCCAAGGCTGGGCGGAGTCGAAGCCTATAAAG GGGACGGTTAAGAGGTGCGTCCAGTTGCGCCGTGTGGTCTTCCGAAATTG CGCTGTTAGCGCATATTGGGGGCCAAGCGAGTGTGCGTGTGCGAAACGCA TCTCCGACGTTGGAACTGATCCGCGATGCTTACCTTGTCCGCTCGTCCTG TGCACGCTACCTCGATCTGTAGCGGTACGAGGATACCCGCGGCACATCTA CCATCCCCTCGAGCACCACCCATCGCGGTACGGTGCTGAGGCGCTAGATA CCGAGTACCTGGTATAAATGTACGTCTCAAGCTCACCTATAGGGCAGTAG GGCAAGGTTTGAGCTGGTGTATAGCCTTTGAAGCTACTCATCCCTCCCCC CCCCTCTCGGTACATCCTAGTTGCCTTCCCTGTGGTAATGCCTAACAAAC ACATCGCAAACACTCGCGCAGAGGAAAGACGCCCGCCGAAGACCTGACCC TAGCGGCCGACCTCGCCAAAGGAGAAAAGAATATGGCGGAAAACCTGATG ATCGTGGACCTCGTCCGGAACGACCTCGGCCGTGTGTGTCGCACCGGATC CGTCAGCGTCCCCAAGCTGATGCATGTCGAGAGCTACGCCACCGTTCACC AGGTAGGTTGGTTTGCGCTAGAATGCCTTTGTCTTTCGCTCGCCGGAGGG CTTCGGCGCCGCCACGCCCTCAAGTACTTTTTCTTGCGAGATATGTGGAA GGGTAGCTGGGCTCTGGAACAGCGGGGAAGGGGAGGGGAGGGGGGGAGGG CGCTCATGTCATGCTTGGGCGTAGTCGTATGATCAAGAACCTTCGCAACA TTACAATGACGGGACGGAGCACGTCGGGTTTTCAACGACCGGGCCGACAT TTGCTTGCACCAAGCGCGAAAGGGGGGGAGCTTCGTGGTTGTTTTCATGG AAGTCACCGTCATCTGCGGTACACTTCCGCACGTGTATCGTGAAAGTCAT TATTCTGTGCACGCCTCCCGATCCCGATGTCACAGCCTTTTCATGCGGCA GGTTTATCATGCAGCAAGCTTATCATGGCTCAGGCTTTCGATGCAACCCG CTCCGGATGCTCGGAGGATATTATTTCGACGCACCATACTTTCAATGTCG CAGGATTTTTTATTTGTATGACAGCTTTCGGTAGAACCGGCTTCCGATGT ATGAGCATTCCGATAGACCAGCAGAGTAAGCCTCCGACAAACCAAGCTGC TCCCGATACCACAGTCTTCCGATATAGAAATTTTCCGATATATTTTAGCA GCATTCCGGTAGAATATTCTTCCGATAAAACATGCTTTCGGTACGTAGAA CAGGCTTCCGAGAGCACAGACCTCTAACCGCACAGGCTTCCGATACAGCA GGTTTCGGATATTTACAGAATCGCACATTCTCCGCTCCACCAATACTGCA CTACCGTCCCAACCCCCGCCTCGTCCTTGCTCCCTCGGCGCTCCAGCTGG TTTCAACCATCCGCGGTCAGCTCAGCCCAGGTTGCGGAGCGCTTGACGCC ATCGCTGCCGCGTTTCCCGGTGGGTCGATGACGGGAGCTCCGAAGCAGCG CACGATGGAGATCATCGACCGATTGGAGGGAGGGAGGCCCCGCGGGGTGT ACTCGGGGAGCATTGGCTTCCTGGGCGTGAACGGTGCTGCGGACTTCAAT ATTGTTATACGAACTGCTGTGGTGAGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig9213:878..6104-

>mRNA_M-pyrifera_M_contig9213.21334.1 ID=mRNA_M-pyrifera_M_contig9213.21334.1|Name=mRNA_M-pyrifera_M_contig9213.21334.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3048bp|location=Sequence derived from alignment at M-pyrifera_M_contig9213:878..6104- (Macrocystis pyrifera P11B4 male)
ATGGGACGAGTGCCCGACAACATTGTCATCTCCCCCGGCCCAGGACGACC
AGACGTGGTGGCCGACTTCGGCATGTGCGCCCAAGCCCTCCGCGAGGCCA
TCCACATCCCCGTCCTGGGCGTTTGTCTCGGTTACGAGGGGCTGGGAATG
GAGCACGGCGCGAAGGTAGTTCACGCTCGGGAGCCCATGCACGGGCGCCT
GTCGCCCATCTTTCACGACGAGGATCCGCTGTTTCGCGGAGTACCGCAAG
GCGCCAGCGTGGTGAGATACCACTCGCTCGTTGTCGACAGGGCCACGCTG
CCGGCTGGAGGCCCGCTAAAGGCCACGGCGTGGACAGGGGATGGGGTCTT
GATGGCGATGAGACATACCGAGTACCCGCACTGGGGGGTGCAATTTCACC
CGGAGAGCGTGGGGACCGAGCACGGGTCAGACATCGTTGGAAATTTCAGG
GATCTGACGGTCGATTGGCGTCGGGCGCGGGGGAGCGGCCGGCGGGAAGG
GGATGCAAGAGCTAGCAGAACGGTGCCTAATGGGGGAGCGACACGGATTG
GTGGGCCCGGGATGGCTGGCCTATCGGATCGAGGCGGCAAGCCAGGGGCG
ATTGCGCCGGCTTTCCCGGTTCCCGAGGATGCAGTGGGGTCCCTGGAGTC
GGGAGAAGAGACCGCTTTTGCCACGGGTGAGCGCAGTCGCAGTCGTCGTC
AGCGTCCCACCGCGAGACGGCGACCCTTCGTGTTGCACGTGCAAGAAGTG
GCGATGACAGGGATGCTAGACGAGGGGGGCGGTGGCGAGAACGGCGTTGG
CGAGCCGGTGCCGGGTGCGCCTATGCCGGATACCGAGCTCGCGTTTCGCT
TGCTGCATGGGGACGACCCGACGGCGTGGTGGCTGGACAGCAGCAGCCAG
AGACCGGGGCTGGCCGTAGACGGCCAAGCGAAAGCCAGATTCACCTTCAT
GGGTGGCGCTGATGGTCCACTCTCTGAGCTGATCGAGTGCTACGGCGATG
ACCGACTGGTTATTCAGCGCGGGGGGGGGAAGAGAAGGGACGGTGAAGCC
ACCACTAACAAGGGCGAGAGGCGAGAAGTACGCGCCAACATACTGGACTA
CCTGAAGGCAAGGATGAGTCAGATGGGGCATGCGAGCGGAGTAGCCTCTA
ACGACAGCCTGGAGATCCGGATGGTAGGGGAGAACATGGCTGGTACAGGG
GAAGCCCTTTCTGGTGGCGGCAAGGGAGACCCCGTTGGCGAGGAGGGGGG
CGGGACGACCCTACCCTTTGACTTTGTCGGTGGGTTCGTGGGATTTTTGG
GGTACGAGCTTCGGCACGAGGCAAATGATGTTTTGGGGCGGAGCGCAGGG
GGAACCGAATGGGACTGGCAGGCGCCGGGGGGTGGGCAGTGGGACGAGGA
AACCTTTGAGGGAGAACGTAAGAGAAGCCCTGATGCGGTCGCGGGTTCGG
TAAAGGTAACGTCGGGTGGAAAGGATATCGAAGGAGCTATGCGCGAGGGA
GGGGGGGGGGGGATGTTCCCCTAGATGGGACGAGTGCCCGACAACATTGT
CATCTCCCCCGGCCCAGGACGACCAGACGTGGTGGCCGACTTCGGCATGT
GCGCCCAAGCCCTCCGCGAGGCCATCCACATCCCCGTCCTGGGCGTTTGT
CTCGGTTACGAGGGGCTGGGAATGGAGCACGGCGCGAAGGTAGTTCACGC
TCGGGAGCCCATGCACGGGCGCCTGTCGCCCATCTTTCACGACGAGGATC
CGCTGTTTCGCGGAGTACCGCAAGGCGCCAGCGTGGTGAGATACCACTCG
CTCGTTGTCGACAGGGCCACGCTGCCGGCTGGAGGCCCGCTAAAGGCCAC
GGCGTGGACAGGGGATGGGGTCTTGATGGCGATGAGACATACCGAGTACC
CGCACTGGGGGGTGCAATTTCACCCGGAGAGCGTGGGGACCGAGCACGGG
TCAGACATCGTTGGAAATTTCAGGGATCTGACGGTCGATTGGCGTCGGGC
GCGGGGGAGCGGCCGGCGGGAAGGGGATGCAAGAGCTAGCAGAACGGTGC
CTAATGGGGGAGCGACACGGATTGGTGGGCCCGGGATGGCTGGCCTATCG
GATCGAGGCGGCAAGCCAGGGGCGATTGCGCCGGCTTTCCCGGTTCCCGA
GGATGCAGTGGGGTCCCTGGAGTCGGGAGAAGAGACCGCTTTTGCCACGG
GTGAGCGCAGTCGCAGTCGTCGTCAGCGTCCCACCGCGAGACGGCGACCC
TTCGTGTTGCACGTGCAAGAAGTGGCGATGACAGGGATGCTAGACGAGGG
GGGCGGTGGCGAGAACGGCGTTGGCGAGCCGGTGCCGGGTGCGCCTATGC
CGGATACCGAGCTCGCGTTTCGCTTGCTGCATGGGGACGACCCGACGGCG
TGGTGGCTGGACAGCAGCAGCCAGAGACCGGGGCTGGCCGTAGACGGCCA
AGCGAAAGCCAGATTCACCTTCATGGGTGGCGCTGATGGTCCACTCTCTG
AGCTGATCGAGTGCTACGGCGATGACCGACTGGTTATTCAGCGCGGGGGG
GGGAAGAGAAGGGACGGTGAAGCCACCACTAACAAGGGCGAGAGGCGAGA
AGTACGCGCCAACATACTGGACTACCTGAAGGCAAGGATGAGTCAGATGG
GGCATGCGAGCGGAGTAGCCTCTAACGACAGCCTGGAGATCCGGATGGTA
GGGGAGAACATGGCTGGTACAGGGGAAGCCCTTTCTGGTGGCGGCAAGGG
AGACCCCGTTGGCGAGGAGGGGGGCGGGACGACCCTACCCTTTGACTTTG
TCGGTGGGTTCGTGGGATTTTTGGGGTACGAGCTTCGGCACGAGGCAAAT
GATGTTTTGGGGCGGAGCGCAGGGGGAACCGAATGGGACTGGCAGGCGCC
GGGGGGTGGGCAGTGGGACGAGGAAACCTTTGAGGGAGAACGTAAGAGAA
GCCCTGATGCGGTCGCGGGTTCGGTAAAGGTAACGTCGGGTGGAAAGGAT
ATCGAAGGAGCTATGCGCGAGGGAGGGGGGGGGGGGATGTTCCCCTAG
back to top